ID: uc004elg.2_intron_0_0_chrX_102942415_f
GENE: (1)
chrX:102942365-102942929+


(2)
AGO2.ip
(6)
B-CELL
(15)
BREAST
(28)
CELL-LINE
(9)
CERVIX
(3)
HEART
(2)
HELA
(4)
LIVER
(1)
OTHER
(1)
RRP40.ip
(22)
SKIN
(1)
UTERUS
(1)
XRN.ip

Sense strand
CTCGGGAGGTGCTGTGTTTGCGCAGGCGTGCGCCCCTGGCGTCGGGACTGGTGAGAGCCACGGCGGGCGCGCGCGCGTGCGTGATGGTGGGGGCGGTGCAGGGAGGGGTTTGCTACTGCGCGCAGGTTGTTATCTATTTCTGTGTTATATTTGAAAATGTTCTAATGAAAAGGAAAATAAATAATTAAGGAAAGGCGACAATAACAGATAAAGGGGCACTGTCAGAAATATTTTGGCTTTCCGTACTGATTTAATTACTTTAAAAATACACTTCCTACGTTTTCCTCCGTGCCAAAATCCTATCGTAAACCACAGCCCTCCAATGATTCAGAGCCAAACCCTTCCATCGCCGCATTAGCAACTCCAAAGGGAGGCTTCTTTCAAGTTCTCTAGTATCGTCCTCCCTCCCCTCCTCCACACCTACCCCCTCCCTTCAAGGTTGCGTGCAGTTCTCTTGGCACAAATACAATTTTCCTGTGAGAATATCTATCTACGACAGCCTTCCCCTCCGTTAGGGACTCCGGATTTCTGTGGCGACTGAGGCGCTCTTACCTTTGCGTCCTGA
........................................................((((..(((.((((....)))).)))..))))......((..((((((.((((..((..(((....)))...)).)))).))))))..))...................................................................................................................................................................................................................................................................................................................................................................................................................................
..................................................51.................................................................................................150.............................................................................................................................................................................................................................................................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189784SRR029124(GSM416753)
HeLa. (hela)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR189783SRR040016(GSM532901)
G645N. (cervix)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189782TAX577740(Rovira)
total RNA. (breast)
SRR040023(GSM532908)
G575T. (cervix)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR191624(GSM715734)
31genomic small RNA (size selected RNA from t. (breast)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033731(GSM497076)
h929 Cell line (h929). (B cell)
TAX577743(Rovira)
total RNA. (breast)
SRR040015(GSM532900)
G623T. (cervix)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR191410(GSM715520)
20genomic small RNA (size selected RNA from t. (breast)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR191451(GSM715561)
177genomic small RNA (size selected RNA from . (breast)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
TAX577580(Rovira)
total RNA. (breast)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR040010(GSM532895)
G529N. (cervix)
SRR040019(GSM532904)
G701T. (cervix)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR040037(GSM532922)
G243T. (cervix)
SRR029129(GSM416758)
SW480. (cell line)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR040036(GSM532921)
G243N. (cervix)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR191621(GSM715731)
16genomic small RNA (size selected RNA from t. (breast)
SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
SRR038855(GSM458538)
D10. (cell line)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR040025(GSM532910)
G613T. (cervix)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
TAX577590(Rovira)
total RNA. (breast)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
TAX577742(Rovira)
total RNA. (breast)
GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR189786SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
TAX577744(Rovira)
total RNA. (breast)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR040024(GSM532909)
G613N. (cervix)
TAX577453(Rovira)
total RNA. (breast)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577746(Rovira)
total RNA. (breast)
SRR191529(GSM715639)
131genomic small RNA (size selected RNA from . (breast)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR191471(GSM715581)
119genomic small RNA (size selected RNA from . (breast)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
...........................................................................................................................................................................................................ACAGATAAAGGGGCACTG........................................................................................................................................................................................................................................................................................................................................................1817.007.00----3.004.00-----------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAATATCTATCTACGA.....................................................................1817.007.00---7.00-------------------------------------------------------------------------------------------
.................................................................GGCGCGCGCGCGTGCGCGTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................202.000.00--------------------2.00--------------------------------------------------------------------------
.................................................................GGCGCGCGCGCGTGCGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................172.000.00-----------------------1.00--------------------1.00--------------------------------------------------
..........................................................................................................................................................................................AAGGAAAGGCGACAATAAC........................................................................................................................................................................................................................................................................................................................................................................1912.002.00-----------2.00-----------------------------------------------------------------------------------
...................................................................CGCGCGCGCGTGCGTGCGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................192.000.00----------------------------2.00------------------------------------------------------------------
...................................................................................................AGGGAGGGGTTTGCTACT................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.002.00------------------2.00----------------------------------------------------------------------------
...........................................GGGACTGGTGAGAGCCACGGCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002.00-------------------------------------------1.00------------1.00--------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGATTTCTGTGGCGACTGAGG......................2212.002.002.00----------------------------------------------------------------------------------------------
...................................................................................................AGGGAGGGGTTTGCTACTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002.00----------------------------------1.00-------------------------------1.00----------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCCTCCGTTAGGGACTCCGGATTT.....................................2512.002.00----------------2.00------------------------------------------------------------------------------
..........................................CGGGACTGGTGAGAGCCACGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002.00--------------------------------2.00--------------------------------------------------------------
..............................................................GCGGGCGCGCGCGCGTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1722.002.00-1.500.50--------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGGATTTCTGTGGCGACTGA........................2212.002.002.00----------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................TTAGCAACTCCAAAGGGAGGCTTCT..........................................................................................................................................................................................2512.002.00---------------2.00-------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................ATTAGCAACTCCAAAGG...................................................................................................................................................................................................1731.671.67---1.67-------------------------------------------------------------------------------------------
........................................GTCGGGACTGGTGAGAGCCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001.001.00----------------------------------------------------------------------------------------------
.........................................................................................GGGGCGGTGCAGGGAGGGGTTTGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001.00-------------------------------------------------------------1.00---------------------------------
.......................AGGCGTGCGCCCCTGGCGTCGGGACTGGTGAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................321.000.00--------------------------------------------------------------------1.00--------------------------
...................................................................................................................................................................................................................AGGGGCACTGTCAGAAATA...............................................................................................................................................................................................................................................................................................................................................1911.001.001.00----------------------------------------------------------------------------------------------
...................................................................CGCGCGCGCGTGCGTGTGGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................201.000.00-------------------------------------------------1.00---------------------------------------------
...................................................................................................AGGGAGGGGTTTGCTAATG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................191.000.00--------------------------------------1.00--------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................ATTAGCAACTCCAAAGGGAGGCTTCTTT........................................................................................................................................................................................2811.001.00-------------------------------------------------------1.00---------------------------------------
.............................................GACTGGTGAGAGCCACGGCGGGGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................241.000.00---------------------------------1.00-------------------------------------------------------------
..........................................CGGGACTGGTGAGAGCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.001.00--------1.00--------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCTCCGTTAGGGACTCCGGATTTCTGA.................................281.000.00------------------------------------------------------------1.00----------------------------------
.......................................................................................................AGGGGTTTGCTACTGCGCG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001.00------1.00----------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................TTCCATCGCCGCATTA................................................................................................................................................................................................................1611.001.00----------1.00------------------------------------------------------------------------------------
..............................................................GCGGGCGCGCGCGCG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1501.001.00----------------------1.00------------------------------------------------------------------------
.................................................................................................GCAGGGAGGGGTTTGTAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................181.000.00-----------------------------------------------------------------------1.00-----------------------
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTCTGTGGCGACTGAG.......................1811.001.00-------------------------------1.00---------------------------------------------------------------
............................................................................GTGCGTGATGGTGGGGGCGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001.001.00----------------------------------------------------------------------------------------------
.............................GCGCCCCTGGCGTCGGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................181.000.00--------------1.00--------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATACAATTTTCCTGTTG.....................................................................................181.000.00------------------------1.00----------------------------------------------------------------------
.....................................................................................................................................................................................................ACAATAACAGATAAAGGGGCAATG........................................................................................................................................................................................................................................................................................................................................................241.000.00-------1.00---------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................TAGTATCGTCCTCCCTCCCCTCCTC......................................................................................................................................................2511.001.00--------1.00--------------------------------------------------------------------------------------
..................................................................GCGCGCGCGCGTGCGGTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1801.001.00----------------------------------------------------1.00------------------------------------------
......................................................................................GTGGGGGCGGTGCAGGGAGGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001.001.00----------------------------------------------------------------------------------------------
..........................................................................................................................................TCTGTGTTATATTTGAAAAT.......................................................................................................................................................................................................................................................................................................................................................................................................................2011.001.001.00----------------------------------------------------------------------------------------------
..........................................CGGGACTGGTGAGAGCCACGGCGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001.00---------------------------------------------------------1.00-------------------------------------
..................................................................GCGCGCGCGCGTGCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1501.001.00-------------------1.00---------------------------------------------------------------------------
........................................................................................GGGGGCGGTGCAGGGAGGGGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001.00-------------------------------------1.00---------------------------------------------------------
.........................................................CCACGGCGGGCGCGCGCGTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................201.000.00------------------------------------------------------------------------1.00----------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTGGCACAAATACAATTTTCCT.........................................................................................2411.001.00---------------------------------------1.00-------------------------------------------------------
....................................................................GCGCGCGCGTGCGTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1501.001.00-------------------1.00---------------------------------------------------------------------------
......................................................................................................GAGGGGTTTGCTACTGCG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001.00-----------------------------1.00-----------------------------------------------------------------
...................................................................................ATGGTGGGGGCGGTGTTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................181.000.00-----------------------------------------------------------1.00-----------------------------------
............................................................................................GCGGTGCAGGGAGGGGTTTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001.00-----------------------1.00-----------------------------------------------------------------------
...........................GTGCGCCCCTGGCGTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1611.001.00----------1.00------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................ACTGTCAGAAATATTTTGG.........................................................................................................................................................................................................................................................................................................................................1911.001.00----------------------------------------------------------------------------------1.00------------
..........................................................................................................................................................................................................AACAGATAAAGGGGCACTGTCAGCTA.................................................................................................................................................................................................................................................................................................................................................261.000.00----------------------------------------------------------------------1.00------------------------
........................................................................................GGGGGCGGTGCAGGGAGGGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001.00---------------------------------------------1.00-------------------------------------------------
...............................................................................................GTGCAGGGAGGGGTTTGCTA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001.00----------------------1.00------------------------------------------------------------------------
.................................................................GGCGCGCGCGCGTGCGCG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................181.000.00-------------1.00---------------------------------------------------------------------------------
..................................................................GCGCGCGCGCGTGCGAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1701.001.00-1.00---------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGGATTTCTGTGGCGAC...........................1811.001.001.00----------------------------------------------------------------------------------------------
..................................................................GCGCGCGCGCGTGCGGTGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1901.001.00-------------------------------------------------------------------------------------1.00---------
...............................................................................................................................TGTTATCTATTTCTGTAATG..................................................................................................................................................................................................................................................................................................................................................................................................................................201.000.00--------------1.00--------------------------------------------------------------------------------
.........................................................................................GGGGCGGTGCAGGGAGGGGTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001.00---------------------------------------------------------------------------------1.00-------------
...........................................GGGACTGGTGAGAGCCACGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001.00---------------------------------------------------------------------1.00-------------------------
........................................................................................................GGGGTTTGCTACTGCGCGCAGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001.00------------------------------------------------------------------------------1.00----------------
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTTCTGTGGCGACTGAGGCGC...................2311.001.00------------------------------------------------------------------------------------1.00----------
..................................................................................................CAGGGAGGGGTTTGCTACTGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001.00---------------------------------------------------1.00-------------------------------------------
.................................................................GGCGCGCGCGCGTGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1540.500.50-----------------------------------0.25--------------------------------------------------------0.25--
.................................................................................TGATGGTGGGGGCGGTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1720.500.50----------------------------------------------------------------------------------------0.50------
....................................................................................................GGGAGGGGTTTGCTACTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................1840.250.25---------------------------------------------------------------------------------------------0.25-
................................................................GGGCGCGCGCGCGTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1550.200.20----------------------------------------------------------------------------------------------0.20

Antisense strand
CTCGGGAGGTGCTGTGTTTGCGCAGGCGTGCGCCCCTGGCGTCGGGACTGGTGAGAGCCACGGCGGGCGCGCGCGCGTGCGTGATGGTGGGGGCGGTGCAGGGAGGGGTTTGCTACTGCGCGCAGGTTGTTATCTATTTCTGTGTTATATTTGAAAATGTTCTAATGAAAAGGAAAATAAATAATTAAGGAAAGGCGACAATAACAGATAAAGGGGCACTGTCAGAAATATTTTGGCTTTCCGTACTGATTTAATTACTTTAAAAATACACTTCCTACGTTTTCCTCCGTGCCAAAATCCTATCGTAAACCACAGCCCTCCAATGATTCAGAGCCAAACCCTTCCATCGCCGCATTAGCAACTCCAAAGGGAGGCTTCTTTCAAGTTCTCTAGTATCGTCCTCCCTCCCCTCCTCCACACCTACCCCCTCCCTTCAAGGTTGCGTGCAGTTCTCTTGGCACAAATACAATTTTCCTGTGAGAATATCTATCTACGACAGCCTTCCCCTCCGTTAGGGACTCCGGATTTCTGTGGCGACTGAGGCGCTCTTACCTTTGCGTCCTGA
........................................................((((..(((.((((....)))).)))..))))......((..((((((.((((..((..(((....)))...)).)))).))))))..))...................................................................................................................................................................................................................................................................................................................................................................................................................................
..................................................51.................................................................................................150.............................................................................................................................................................................................................................................................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189784SRR029124(GSM416753)
HeLa. (hela)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR189783SRR040016(GSM532901)
G645N. (cervix)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189782TAX577740(Rovira)
total RNA. (breast)
SRR040023(GSM532908)
G575T. (cervix)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR191624(GSM715734)
31genomic small RNA (size selected RNA from t. (breast)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033731(GSM497076)
h929 Cell line (h929). (B cell)
TAX577743(Rovira)
total RNA. (breast)
SRR040015(GSM532900)
G623T. (cervix)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR191410(GSM715520)
20genomic small RNA (size selected RNA from t. (breast)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR191451(GSM715561)
177genomic small RNA (size selected RNA from . (breast)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
TAX577580(Rovira)
total RNA. (breast)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR040010(GSM532895)
G529N. (cervix)
SRR040019(GSM532904)
G701T. (cervix)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR040037(GSM532922)
G243T. (cervix)
SRR029129(GSM416758)
SW480. (cell line)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR040036(GSM532921)
G243N. (cervix)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR191621(GSM715731)
16genomic small RNA (size selected RNA from t. (breast)
SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
SRR038855(GSM458538)
D10. (cell line)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR040025(GSM532910)
G613T. (cervix)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
TAX577590(Rovira)
total RNA. (breast)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
TAX577742(Rovira)
total RNA. (breast)
GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR189786SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
TAX577744(Rovira)
total RNA. (breast)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR040024(GSM532909)
G613N. (cervix)
TAX577453(Rovira)
total RNA. (breast)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577746(Rovira)
total RNA. (breast)
SRR191529(GSM715639)
131genomic small RNA (size selected RNA from . (breast)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR191471(GSM715581)
119genomic small RNA (size selected RNA from . (breast)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGACGCAAAGGTAAGAG.. 1819.009.00------1.00-------------------2.00---2.00---1.00------------1.001.00------------------1.00---------------------------
...............................................................GCACGCGCGCGCGCCCG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 1719.009.00-6.002.00---------1.00----------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................GAGGGCTGTGGTTTACGATAGG..................................................................................................................................................................................................................................................... 2214.004.00----4.00------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGACGCAAAGGTAAGAGCGC... 2013.003.003.00----------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAACGGAGGGGAAGGCTGT.................................................. 2012.002.00---------2.00-------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................GAAGGGTTTGGCTCTGAATCATTGGAGGGCT............................................................................................................................................................................................................................. 3112.002.00-----------------2.00-----------------------------------------------------------------------------
............................................................CGGCGGGCGCGCGCGCCGCG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 202.000.00-1.001.00--------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCTAACGGAGGGGAAGGCTGT................................................ 2212.002.00------2.00----------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................ACCACAGCCCTCCAACGG............................................................................................................................................................................................................................................... 181.000.00---------------------1.00-------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGACGCAAAGGTAAG. 1711.001.00------------------------------------1.00----------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGGACGCAAAGGTAAGAGCGC 2311.001.00---------------------------1.00-------------------------------------------------------------------
..............................................................GCACGCGCGCGCGCCCGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 1811.001.00--------------------------------------------------------------------------1.00--------------------
.............................................................GGCGGGCGCGCGCGCGTCG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 191.000.00-----------0.50-------------------------------------------------------------------------------0.50---
...........................................................................................................................................................................................................................................................................................................................................................................................GGAGGACGATACTAGAGAACTTGAA................................................................................................................................................................. 2511.001.00-----------------------------------1.00-----------------------------------------------------------
......................................................................................................................................................................GAAAAGGAAAATAAATACTTG.......................................................................................................................................................................................................................................................................................................................................................................................... 211.000.00-----------------------------------------------------------------------------------1.00-----------
....................................................................................................................................................................ATGAAAAGGAAAATAAATAATTAAGGAAAGGCAG............................................................................................................................................................................................................................................................................................................................................................................... 341.000.00--------------------------------------------------------------------------------------1.00--------
............................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTGTATTTGTGCCAAGAGAACTGCA.............................................................................................. 2711.001.00----------1.00------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................GCTAATGCGGCGATGGAAGGGTTT.............................................................................................................................................................................................................. 2411.001.00-------1.00---------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGAGAACTGCACGCAACCTT............................................................................................................ 2211.001.00----------------------------------------------------------------1.00------------------------------
................................................................................................................................................................................................................................................................................................................GTAAACCACAGCCCTCCAATTCTG............................................................................................................................................................................................................................................. 241.000.00-----------------------------------------1.00-----------------------------------------------------
................................................................GGGCGCGCGCGCGTGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 171.000.00-1.00---------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................TATCGTCCTCCCTCCCCTCCA....................................................................................................................................................... 211.000.00----------------------------------------------------------1.00------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGCAAAGGTAAGAGCG.... 1811.001.00--------------------------------------------------------------------------------1.00--------------
..............................................................GCGGGCGCGCGCGCGTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 1701.000.00----------------------------------------1.00------------------------------------------------------
.............................................................GGCGGGCGCGCGCGCGTCGCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 211.000.00------------------------------------------1.00----------------------------------------------------
............................................................CGGCGGGCGCGCGCGCGCGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 201.000.00--1.00--------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................AAACGTAGGAAGTGT........................................................................................................................................................................................................................................................................................... 1511.001.00---------------------------------------------------------------------------1.00-------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCCTAACGGAGGGGAAGGCT.............................................. 2211.001.00---------1.00-------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAATCCGGAGTCCCTAA.................................... 1811.001.00-----------------------------------------------------------------------------1.00-----------------
............................................................CGGCGGGCGCGCGCGCGCCGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 211.000.00--1.00--------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................AAACCACAGCCCTCCAATGG............................................................................................................................................................................................................................................... 201.000.00---------------------------------1.00-------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTAACGGAGGGGAAGGCTG................................................. 2011.001.00-------1.00---------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGTCGCCACAGAAATC........................ 1811.001.00--------------------------------------------------------------1.00--------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGACGCAAAGGTAAGAG. 1911.001.00-------------------------------1.00---------------------------------------------------------------
............................................................CGGCGGGCGCGCGCGCGCGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 201.000.00--1.00--------------------------------------------------------------------------------------------
.....................................................................................GGTGGGGGCGGTGCAGGGGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 211.000.00-------------------------1.00---------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGACGCAAAGGTAA. 1611.001.00---------------------------1.00-------------------------------------------------------------------
...................................................................................................................................................................AATGAAAAGGAAAATATCAG.............................................................................................................................................................................................................................................................................................................................................................................................. 201.000.00------------------------1.00----------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCCTTCCCCTCCGTTAGGA................................................ 221.000.00-----------------------------1.00-----------------------------------------------------------------
............................................................CGGCGGGCGCGCGCGCGCCC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 201.000.00-1.00---------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCTAACGGAGGGGAAGGCTG................................................ 2111.001.00-------1.00---------------------------------------------------------------------------------------
............................................................CGGCGGGCGCGCGCGCGGCG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 201.000.00--1.00--------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGGAGGGGAAGGCTG.................................................... 1711.001.00---------------------------------------------------------------1.00-------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTACCTTTGCGTCCTT. 181.000.00-------------------------1.00---------------------------------------------------------------------
.............................................................................................................................................................................AAAATAAATAATTAAGTAAG.................................................................................................................................................................................................................................................................................................................................................................................... 201.000.00-------------------------------------------------------------------------------1.00---------------
............................................................................................................................................................................................................................................................................................................................TGGCTCTGAATCATTGGAGG..................................................................................................................................................................................................................................... 2011.001.00------------------------------------------------------1.00----------------------------------------
....................................................................................................................................................................................................................................................................................................................ACCACAGCCCTCCAAAGG............................................................................................................................................................................................................................................... 181.000.00---------------------1.00-------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCTAACGGAGGGGAAGGCTGTCGT................................................ 2511.001.00----1.00------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGGGAAGGCTGTCGTAGATA........................................................ 2211.001.00-----------------------------------------------------------------1.00-----------------------------
................................................................GGGCGCGCGCGCGTGCCCGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 201.000.00-------------1.00---------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGGACGCAAAGGTAAGA 1911.001.00-------------------------------------------------------------------------1.00---------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGACGCAAAGGTAAGAGC. 2011.001.00------------1.00----------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGAGCGCCTCAGTCGCCACAGAAATCCGG............. 3211.001.00-----------------------------------------------------1.00-----------------------------------------
.....GCGCAAACACAGCACCTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 1811.001.00--------1.00--------------------------------------------------------------------------------------
...............................................................................................................................................................................................CCCCTTTATCTGTTATTGTCGCCTT............................................................................................................................................................................................................................................................................................................................................................. 2511.001.00----------------------------------------------------------------------------1.00------------------
.............................................................GGCGGGCGCGCGCGCGTCGCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 211.000.00--0.50--------------------------------------------------------------------------------------0.50-----
..............................................................GCGGGCGCGCGCGCGTGGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 1901.000.00--------------------------------------------------1.00--------------------------------------------
............................................................CGGCGGGCGCGCGCGCGGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 201.000.00--1.00--------------------------------------------------------------------------------------------
.................................................................GCACGCGCGCGCGCC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 1540.750.75-0.250.25---------0.25----------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................TAGAGAACTTGAAAGAA............................................................................................................................................................................. 1730.670.67---------------------------------------------------------------------------------------0.67-------
.............................................................ACGCGCGCGCGCCCGCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 1720.500.50--0.50--------------------------------------------------------------------------------------------
.............................................................GGCGGGCGCGCGCGCGTCGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 200.500.00------------------------------------------------------------------------------------------0.50----
..............................................................ACGCGCGCGCGCCCGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 1650.200.20--------------------------------------------------------------------------------------------0.20--
.......................................................................................................................................................................................................................................................................................................................TCATTGGAGGGCTGT............................................................................................................................................................................................................................................... 1570.140.14------------------------------------0.14----------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................ATTGGAGGGCTGTGG................................................................................................................................................................................................................................................. 1580.120.12-------------------------------------0.12---------------------------------------------------------