| (1) AGO2.ip | (8) B-CELL | (5) BRAIN | (14) BREAST | (23) CELL-LINE | (5) CERVIX | (2) HEART | (6) OTHER | (7) SKIN | (4) UTERUS |
| GTTCACAGACATCTGGGGGAAGAAAAGGAGCAGGAAACTACCCCGCACAGGTCAGTATGAGAGAGGCACTTAGACTGAGATCTCTGAGGATAGGAGTCGGGAAGGGGCAAAAGCTAGGCGAAATTTGCGGCTTCGCAGTCCATCTCCTTTTCTGCTCCGCCTCTCCTGCCTATTGGAGAGGCCATTAGCTTTGTCTGCTGGGGAAACGGTGGGTTCCTGAGGTGGGAGGGGAGAAAAGGGGGAGATGAGAGGGTGGAGGGAACTGCCGCAGACTTATGAGGTCTGGACCTGTGGGGCAGAGATGGGAAAGTATCTTGCCTCAGAGAGAAACTGACAATCGTGATTCAAAAGTAATGAAGCAATTTGTCTTTACATTTTCTCCCTAGAGTTAAGCAGGAAACAACAACAACATCATGCAAAAACCCTGCAAAGAAAA ....................................................................((((((........))))))....(((((.(((((((((.....(((..(((((.........))))))))....))))))))).)))))((((((((........))))))))..(((((.......)))))........................................................................................................................................................................................................................................... ....................................................................69..........................................................................................................................................209................................................................................................................................................................................................................................. | Size | Perfect hit | Total Norm | Perfect Norm | SRR107297(GSM677704) 18-30nt fraction of small RNA. (cell line) | SRR015447(SRR015447) nuclear small RNAs. (breast) | SRR037937(GSM510475) 293cand2. (cell line) | SRR094132(GSM651908) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | SRR094129(GSM651905) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | SRR207110(GSM721072) Nuclear RNA. (cell line) | SRR094130(GSM651906) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | SRR015446(SRR015446) smallRNAs high-throughput sequencing Total. (breast) | SRR094131(GSM651907) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | SRR107296(GSM677703) 18-30nt fraction of small RNA. (cell line) | SRR015448(SRR015448) cytoplasmic small RNAs. (breast) | SRR038857(GSM458540) D20. (cell line) | SRR033728(GSM497073) MALT (MALT413). (B cell) | SRR060169(GSM565979) 5-8F_cytoplasm. (cell line) | GSM450604(GSM450604) miRNA sequencing raw reads from post-mortem s. (brain) | SRR015358(GSM380323) NaÌøve B Cell (Naive39). (B cell) | SRR038861(GSM458544) MM466. (cell line) | SRR038859(GSM458542) MM386. (cell line) | TAX577739(Rovira) total RNA. (breast) | TAX577580(Rovira) total RNA. (breast) | SRR039193(GSM494812) HL60 cell line is derived from acute promyelo. (cell line) | SRR060168(GSM565978) 5-8F_nucleus. (cell line) | SRR040024(GSM532909) G613N. (cervix) | SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR040012(GSM532897) G648N. (cervix) | SRR189784 | SRR040018(GSM532903) G701N. (cervix) | SRR330908(SRX091746) tissue: normal skindisease state: normal. (skin) | SRR330900(SRX091738) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR033722(GSM497067) KMS12 cell line (KMS12). (B cell) | TAX577746(Rovira) total RNA. (breast) | SRR189787 | SRR040028(GSM532913) G026N. (cervix) | SRR189783 | GSM339995(GSM339995) hues6NP. (cell line) | SRR342901(SRX096797) small RNA seq of Left atrial tissue. (heart) | GSM450609(GSM450609) miRNA sequencing raw reads from post-mortem s. (brain) | SRR189782 | TAX577740(Rovira) total RNA. (breast) | SRR015364(GSM380329) Plasma B cells (PC44). (B cell) | SRR189785 | SRR444069(SRX128917) Sample 26cDNABarcode: AF-PP-342: ACG CTC TTC . (skin) | SRR033727(GSM497072) HIV-positive DL (HIV412). (B cell) | GSM450603(GSM450603) miRNA sequencing raw reads from post-mortem s. (brain) | TAX577741(Rovira) total RNA. (breast) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | GSM339994(GSM339994) hues6. (cell line) | SRR038854(GSM458537) MM653. (cell line) | SRR037932(GSM510470) 293cand4_rep1. (cell line) | SRR191559(GSM715669) 65genomic small RNA (size selected RNA from t. (breast) | SRR037938(GSM510476) 293Red. (cell line) | SRR191634(GSM715744) 98genomic small RNA (size selected RNA from t. (breast) | SRR444057(SRX128905) Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin) | SRR330901(SRX091739) tissue: skin psoriatic uninvolveddisease stat. (skin) | TAX577742(Rovira) total RNA. (breast) | GSM956925AGO2Paz8(GSM956925) "cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line) | SRR189786 | SRR040032(GSM532917) G603N. (cervix) | GSM450602(GSM450602) miRNA sequencing raw reads from post-mortem s. (brain) | SRR330869(SRX091707) tissue: skin psoriatic involveddisease state:. (skin) | SRR342897(SRX096793) small RNA seq of Left atrial tissue. (heart) | GSM450597(GSM450597) miRNA sequencing raw reads from post-mortem s. (brain) | SRR033729(GSM497074) splenic MZL (Splenic414). (B cell) | SRR326281(GSM769511) "Dicer mRNA was knocked down using siDicer, c. (cell line) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR029125(GSM416754) U2OS. (cell line) | TAX577588(Rovira) total RNA. (breast) | SRR033710(GSM497055) GCB DLBCL (GCB385). (B cell) | SRR033726(GSM497071) Mututated CLL (CLLM633). (B cell) | TAX577744(Rovira) total RNA. (breast) | SRR330915(SRX091753) tissue: normal skindisease state: normal. (skin) | TAX577453(Rovira) total RNA. (breast) | SRR326279(GSM769509) cytoplasmic fraction was isolated using PARIS. (cell line) | SRR326280(GSM769510) total cell content of unperturbed cells was s. (cell line) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..........................................................................................................................................................................................AGCTTTGTCTGCTGGGTTT....................................................................................................................................................................................................................................... | 19 | 66.00 | 0.00 | 13.00 | 11.00 | - | 3.00 | 2.00 | - | 3.00 | 2.00 | 5.00 | 3.00 | 3.00 | 5.00 | - | 2.00 | - | 3.00 | - | 3.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................................................AGCTTTGTCTGCTGGGTTTC...................................................................................................................................................................................................................................... | 20 | 46.00 | 0.00 | 22.00 | - | 4.00 | 3.00 | - | - | 1.00 | 1.00 | 2.00 | 2.00 | - | - | - | 2.00 | 2.00 | - | 3.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................................................AGCTTTGTCTGCTGGGTTTT...................................................................................................................................................................................................................................... | 20 | 11.00 | 0.00 | - | 3.00 | - | - | 2.00 | - | - | 2.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................................................AGCTTTGTCTGCTGGGTT........................................................................................................................................................................................................................................ | 18 | 11.00 | 0.00 | - | 2.00 | - | 3.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................ACTGAGATCTCTGAGATGT........................................................................................................................................................................................................................................................................................................................................................ | 19 | 8.00 | 0.00 | - | - | - | - | - | 8.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................................................AGCTTTGTCTGCTGGGTTTA...................................................................................................................................................................................................................................... | 20 | 6.00 | 0.00 | - | - | 1.00 | - | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................................................................GCTTTGTCTGCTGGGTTT....................................................................................................................................................................................................................................... | 18 | 4.00 | 0.00 | - | - | - | - | - | - | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................................................AGCTTTGTCTGCTGGGTTA....................................................................................................................................................................................................................................... | 19 | 3.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................................................................................................................................................................................................................TCTTGCCTCAGAGAGGGCA......................................................................................................... | 19 | 2.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................................................................................................................................................................................................................TCTTGCCTCAGAGAGTGCA......................................................................................................... | 19 | 2.00 | 0.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................................................................................................................................................................................................AGGGTGGAGGGAACTAAA......................................................................................................................................................................... | 18 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................................................AGCTTTGTCTGCTGGGTCTC...................................................................................................................................................................................................................................... | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................................................AGCTTTGTCTGCTGGTTTT....................................................................................................................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................AGACTGAGATCTCTGAGATT......................................................................................................................................................................................................................................................................................................................................................... | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................................................AGCTTTGTCTGCTGGGTTTG...................................................................................................................................................................................................................................... | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................................................GTCTGCTGGGGAAACTCTG................................................................................................................................................................................................................................. | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................................................................................................................................................................................................................................TCTTTACATTTTCTCCTTTC.................................................. | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | |
| .........................................................................................................................................................................................................................TGAGGTGGGAGGGGATAT......................................................................................................................................................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................................................................................................................................................................................................................................................................TACATTTTCTCCCTATTA................................................ | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................................................AGCTTTGTCTGCTGGGTTGT...................................................................................................................................................................................................................................... | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................................................................................................................................................................................................................................AGAGAGAAACTGACAAAGCC............................................................................................... | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................................................................................................................................GAGGGGAGAAAAGGGGGT................................................................................................................................................................................................. | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................................................AGCTTTGTCTGCTGGGTTAT...................................................................................................................................................................................................................................... | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................................................................................................................AGGGAACTGCCGCAGAGTCC................................................................................................................................................................ | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................AGGAAACTACCCCGCT..................................................................................................................................................................................................................................................................................................................................................................................................... | 16 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................CTTAGACTGAGATCTCTGAG............................................................................................................................................................................................................................................................................................................................................................ | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................AAAAGGGGGAGATGAGCA......................................................................................................................................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................AGACTGAGATCTCTGA............................................................................................................................................................................................................................................................................................................................................................. | 16 | 8 | 0.25 | 0.25 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.12 | 0.12 |
| GTTCACAGACATCTGGGGGAAGAAAAGGAGCAGGAAACTACCCCGCACAGGTCAGTATGAGAGAGGCACTTAGACTGAGATCTCTGAGGATAGGAGTCGGGAAGGGGCAAAAGCTAGGCGAAATTTGCGGCTTCGCAGTCCATCTCCTTTTCTGCTCCGCCTCTCCTGCCTATTGGAGAGGCCATTAGCTTTGTCTGCTGGGGAAACGGTGGGTTCCTGAGGTGGGAGGGGAGAAAAGGGGGAGATGAGAGGGTGGAGGGAACTGCCGCAGACTTATGAGGTCTGGACCTGTGGGGCAGAGATGGGAAAGTATCTTGCCTCAGAGAGAAACTGACAATCGTGATTCAAAAGTAATGAAGCAATTTGTCTTTACATTTTCTCCCTAGAGTTAAGCAGGAAACAACAACAACATCATGCAAAAACCCTGCAAAGAAAA ....................................................................((((((........))))))....(((((.(((((((((.....(((..(((((.........))))))))....))))))))).)))))((((((((........))))))))..(((((.......)))))........................................................................................................................................................................................................................................... ....................................................................69..........................................................................................................................................209................................................................................................................................................................................................................................. | Size | Perfect hit | Total Norm | Perfect Norm | SRR107297(GSM677704) 18-30nt fraction of small RNA. (cell line) | SRR015447(SRR015447) nuclear small RNAs. (breast) | SRR037937(GSM510475) 293cand2. (cell line) | SRR094132(GSM651908) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | SRR094129(GSM651905) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | SRR207110(GSM721072) Nuclear RNA. (cell line) | SRR094130(GSM651906) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | SRR015446(SRR015446) smallRNAs high-throughput sequencing Total. (breast) | SRR094131(GSM651907) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | SRR107296(GSM677703) 18-30nt fraction of small RNA. (cell line) | SRR015448(SRR015448) cytoplasmic small RNAs. (breast) | SRR038857(GSM458540) D20. (cell line) | SRR033728(GSM497073) MALT (MALT413). (B cell) | SRR060169(GSM565979) 5-8F_cytoplasm. (cell line) | GSM450604(GSM450604) miRNA sequencing raw reads from post-mortem s. (brain) | SRR015358(GSM380323) NaÌøve B Cell (Naive39). (B cell) | SRR038861(GSM458544) MM466. (cell line) | SRR038859(GSM458542) MM386. (cell line) | TAX577739(Rovira) total RNA. (breast) | TAX577580(Rovira) total RNA. (breast) | SRR039193(GSM494812) HL60 cell line is derived from acute promyelo. (cell line) | SRR060168(GSM565978) 5-8F_nucleus. (cell line) | SRR040024(GSM532909) G613N. (cervix) | SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR040012(GSM532897) G648N. (cervix) | SRR189784 | SRR040018(GSM532903) G701N. (cervix) | SRR330908(SRX091746) tissue: normal skindisease state: normal. (skin) | SRR330900(SRX091738) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR033722(GSM497067) KMS12 cell line (KMS12). (B cell) | TAX577746(Rovira) total RNA. (breast) | SRR189787 | SRR040028(GSM532913) G026N. (cervix) | SRR189783 | GSM339995(GSM339995) hues6NP. (cell line) | SRR342901(SRX096797) small RNA seq of Left atrial tissue. (heart) | GSM450609(GSM450609) miRNA sequencing raw reads from post-mortem s. (brain) | SRR189782 | TAX577740(Rovira) total RNA. (breast) | SRR015364(GSM380329) Plasma B cells (PC44). (B cell) | SRR189785 | SRR444069(SRX128917) Sample 26cDNABarcode: AF-PP-342: ACG CTC TTC . (skin) | SRR033727(GSM497072) HIV-positive DL (HIV412). (B cell) | GSM450603(GSM450603) miRNA sequencing raw reads from post-mortem s. (brain) | TAX577741(Rovira) total RNA. (breast) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | GSM339994(GSM339994) hues6. (cell line) | SRR038854(GSM458537) MM653. (cell line) | SRR037932(GSM510470) 293cand4_rep1. (cell line) | SRR191559(GSM715669) 65genomic small RNA (size selected RNA from t. (breast) | SRR037938(GSM510476) 293Red. (cell line) | SRR191634(GSM715744) 98genomic small RNA (size selected RNA from t. (breast) | SRR444057(SRX128905) Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin) | SRR330901(SRX091739) tissue: skin psoriatic uninvolveddisease stat. (skin) | TAX577742(Rovira) total RNA. (breast) | GSM956925AGO2Paz8(GSM956925) "cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line) | SRR189786 | SRR040032(GSM532917) G603N. (cervix) | GSM450602(GSM450602) miRNA sequencing raw reads from post-mortem s. (brain) | SRR330869(SRX091707) tissue: skin psoriatic involveddisease state:. (skin) | SRR342897(SRX096793) small RNA seq of Left atrial tissue. (heart) | GSM450597(GSM450597) miRNA sequencing raw reads from post-mortem s. (brain) | SRR033729(GSM497074) splenic MZL (Splenic414). (B cell) | SRR326281(GSM769511) "Dicer mRNA was knocked down using siDicer, c. (cell line) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR029125(GSM416754) U2OS. (cell line) | TAX577588(Rovira) total RNA. (breast) | SRR033710(GSM497055) GCB DLBCL (GCB385). (B cell) | SRR033726(GSM497071) Mututated CLL (CLLM633). (B cell) | TAX577744(Rovira) total RNA. (breast) | SRR330915(SRX091753) tissue: normal skindisease state: normal. (skin) | TAX577453(Rovira) total RNA. (breast) | SRR326279(GSM769509) cytoplasmic fraction was isolated using PARIS. (cell line) | SRR326280(GSM769510) total cell content of unperturbed cells was s. (cell line) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .......................................................................................................................................AGAAAAGGAGATGGACTG........................................................................................................................................................................................................................................................................................... | 18 | 2 | 5.50 | 5.50 | - | - | - | - | - | - | - | - | - | - | - | - | 1.50 | - | - | - | - | - | 0.50 | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | 0.50 | 0.50 | 0.50 | 0.50 | 0.50 | - | - |
| ..............................................................................................................................................GCGGAGCAGAAAAGGAGA.................................................................................................................................................................................................................................................................................... | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................................AGGGGGAGATGAGAGCCTG..................................................................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................................AGAGGCGGAGCAGAAAAG................................................................................................................................................................................................................................................................................ | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................GAGGGGAGAAAAGGGGCCC................................................................................................................................................................................................ | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................................................................................................................................................................................................................................................................................................................................................AGTAATGAAGCAATTAAAA.................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................................................................................................................AGAAAAGGAGATGGACTGCGAAGCCGCA........................................................................................................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................................GGAACTGCCGCAGACTCC................................................................................................................................................................ | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................................................................................................GGAGAGGCGGAGCAGAAAAGGAGATGGACTGC.............................................................................................................................................................................................................................................................................. | 32 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................TCTGCTCCGCCTCTCCTG............................................................................................................................................................................................................................................................................ | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................................................................................................................................................................TGGACCTGTGGGGCAAAA....................................................................................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................................................................................................................................................................................................................GTGGGAGGGGAGAAAGATC.................................................................................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................................................................CAGTCCATCTCCTTTTCA........................................................................................................................................................................................................................................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................................................................................................CAGAAAAGGAGATGGACTGC.......................................................................................................................................................................................................................................................................................... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................AGGCGGAGCAGAAAAGGAGAT.................................................................................................................................................................................................................................................................................. | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................AGATGGACTGCGAAGCCGCA................................................................................................................................................................................................................................................................................................... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................ATGGACTGCGAAGCCGCAAATTTC..................................................................................................................................................................................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................GAGGCGGAGCAGAAAAGGAG................................................................................................................................................................................................................................................................................. | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................................................................................................................................................TACATTTTCTCCCTAGACTGA............................................. | 21 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................................................................................................................AGGGGAGAAAAGGGGTAAG............................................................................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................................................AAATTTCGCCTAGCTTTT...................................................................................................................................................................................................................................................................................................................... | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................AGGAGAGGCGGAGCAGAA............................................................................................................................................................................................................................................................................. | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |