uc004eif.3_intron_2_0_chrX_100913556

GAAATGGCGGACGGGGGCGGGGCAAAGCGGAAGGAGGGATTGAGTGCCTGGGGAGCCTGCGCAGGAGGAGGATTGAGGTGGGAGGGGTGGGGTGAGAAGAGTTGAAGGAATTGAGAGGTAGAATCATTTGACATTCTGATGTGCAAACACGAAAAGGCAGTTACTGAGACCCTTGTCCTGGATGCTGATCCATCCACCAGGCTTTCATTGTCTAACGTCGACAGTCTATATTTCTGCTCTTCAGTCTGTC
......................................................................(((((..((.((((..((.((((((......((.((....)).))........)))))).)).)))).))(((....))).......)))))........................................................................................
....................................................................69...........................................................................................162......................................................................................

Size

Perfect hit

Total Norm

Perfect Norm

SRR189783

SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)

SRR189784

SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)

SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR189787

SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)

SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)

SRR189782

SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)

TAX577579(Rovira)
total RNA. (breast)

SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)

SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)

SRR040034(GSM532919)
G001N. (cervix)

SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)

SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)

SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)

SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)

SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)

SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)

SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)

TAX577746(Rovira)
total RNA. (breast)

SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR040028(GSM532913)
G026N. (cervix)

SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)

GSM532929(GSM532929)
G702N. (cervix)

SRR343336

GSM532871(GSM532871)
G652N. (cervix)

SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)

TAX577740(Rovira)
total RNA. (breast)

SRR037937(GSM510475)
293cand2. (cell line)

SRR189785

SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)

TAX577739(Rovira)
total RNA. (breast)

SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)

SRR040038(GSM532923)
G531N. (cervix)

SRR040012(GSM532897)
G648N. (cervix)

GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)

SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)

SRR040035(GSM532920)
G001T. (cervix)

SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)

SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)

TAX577743(Rovira)
total RNA. (breast)

SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR038852(GSM458535)
QF1160MB. (cell line)

SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)

SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)

SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)

...........................................................................................................................................TGTGCAAACACGAAAGTGG............................................................................................

23.00

0.00

8.00

4.00

2.00

1.00

...........................................................................................................................................TGTGCAAACACGAAAGCGG............................................................................................

5.00

0.00

4.00

1.00

...........................................................................................................................................TGTGCAAACACGAAAGGGG............................................................................................

3.00

0.00

1.00

....TGGCGGACGGGGGCGTA.....................................................................................................................................................................................................................................

1.00

0.00

1.00

.........................................................................TGAGGTGGGAGGGGTGGGG..............................................................................................................................................................

1.00

......................................................................................................TGAAGGAATTGAGAGATA..................................................................................................................................

1.00

0.00

1.00

........................................................................................................AAGGAATTGAGAGGTAGAATCAT...........................................................................................................................

1.00

..........................................................................................................................................................AGGCAGTTACTGAGAATTC.............................................................................

1.00

0.00

1.00

................................................................................................................GAGAGGTAGAATCATTCCC.......................................................................................................................

1.00

0.00

1.00

....................................................GAGCCTGCGCAGGAGGAGCTCT................................................................................................................................................................................

1.00

0.00

1.00

...................GGGCAAAGCGGAAGGGC......................................................................................................................................................................................................................

1.00

0.00

1.00

...........................................................................................................................................TGTGCAAACACGAAATTGG............................................................................................

1.00

0.00

1.00

..........................................................................................................................................................AGGCAGTTACTGAGAGAG..............................................................................

1.00

0.00

1.00

.............................................................................................GAGAAGAGTTGAAGGAAAGTG........................................................................................................................................

1.00

0.00

1.00

.........................AGCGGAAGGAGGGATAGTT..............................................................................................................................................................................................................

1.00

0.00

1.00

.........................AGCGGAAGGAGGGATGCC...............................................................................................................................................................................................................

1.00

0.00

1.00

....................................................................................................................................ATTCTGATGTGCAAACACGA..................................................................................................

1.00

..................................................................................................................................................................................TGGATGCTGATCCATGAAG.....................................................

1.00

0.00

1.00

..........................................AGTGCCTGGGGAGCCTGGGC............................................................................................................................................................................................

1.00

0.00

1.00

............................................................................GGTGGGAGGGGTGGGCCCA...........................................................................................................................................................

1.00

0.00

1.00

............................................................................................................................................................................TTGTCCTGGATGCTGGTG............................................................

1.00

0.00

1.00

...........................................................................................................................................................................................................................................GCTCTTCAGTCTGTCGTTT

1.00

0.00

1.00

.....GGCGGACGGGGGCGGAATA..................................................................................................................................................................................................................................

1.00

0.00

1.00

........................................................................................................AAGGAATTGAGAGGTAGAATCATTTGACA.....................................................................................................................

1.00

.....................................................................................................TTGAAGGAATTGAGAGCACA.................................................................................................................................

1.00

0.00

1.00

....................................................................................................................................ATTCTGATGTGCAAACACGAAAAGG.............................................................................................

1.00

...........................................................................................................................................................................................................................................GCTCTTCAGTCTGTCGATC

1.00

0.00

1.00

........................................................................................GGGGTGAGAAGAGTTGATGGG.............................................................................................................................................

1.00

0.00

1.00

.....................................................................................................................................................................................ATGCTGATCCATCCAATTT..................................................

1.00

0.00

1.00

............................................................GCAGGAGGAGGATTGCATT...........................................................................................................................................................................

1.00

0.00

1.00

..........................................................................................................................ATCATTTGACATTCTGA...............................................................................................................

0.33

.........................................................................TGAGGTGGGAGGGGTGGG...............................................................................................................................................................

0.17

GAAATGGCGGACGGGGGCGGGGCAAAGCGGAAGGAGGGATTGAGTGCCTGGGGAGCCTGCGCAGGAGGAGGATTGAGGTGGGAGGGGTGGGGTGAGAAGAGTTGAAGGAATTGAGAGGTAGAATCATTTGACATTCTGATGTGCAAACACGAAAAGGCAGTTACTGAGACCCTTGTCCTGGATGCTGATCCATCCACCAGGCTTTCATTGTCTAACGTCGACAGTCTATATTTCTGCTCTTCAGTCTGTC ......................................................................(((((..((.((((..((.((((((......((.((....)).))........)))))).)).)))).))(((....))).......)))))........................................................................................ ....................................................................69...........................................................................................162......................................................................................	Size	Perfect hit	Total Norm	Perfect Norm	SRR189783	SRR189776(GSM714636) cell line: HEK293clip variant: CLIPenzymatic . (cell line)	SRR189784	SRR037876(GSM522374) fibroblasts_cell_culture. (fibroblast)	SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR189787	SRR326279(GSM769509) cytoplasmic fraction was isolated using PARIS. (cell line)	SRR330907(SRX091745) tissue: normal skindisease state: normal. (skin)	SRR189782	SRR330917(SRX091755) tissue: normal skindisease state: normal. (skin)	TAX577579(Rovira) total RNA. (breast)	SRR326281(GSM769511) "Dicer mRNA was knocked down using siDicer, c. (cell line)	SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR330892(SRX091730) tissue: skin psoriatic uninvolveddisease stat. (skin)	SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line)	SRR040034(GSM532919) G001N. (cervix)	SRR330867(SRX091705) tissue: skin psoriatic involveddisease state:. (skin)	SRR037942(GSM510480) 293DroshaTN_cand5. (cell line)	SRR330905(SRX091743) tissue: normal skindisease state: normal. (skin)	SRR330879(SRX091717) tissue: skin psoriatic involveddisease state:. (skin)	SRR107297(GSM677704) 18-30nt fraction of small RNA. (cell line)	SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line)	SRR039625(GSM531988) HBV(-) HCV(-) HCC Tissue Sample. (liver)	TAX577746(Rovira) total RNA. (breast)	SRR330882(SRX091720) tissue: skin psoriatic uninvolveddisease stat. (skin)	SRR040028(GSM532913) G026N. (cervix)	SRR444046(SRX128894) Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)	GSM532929(GSM532929) G702N. (cervix)	SRR343336	GSM532871(GSM532871) G652N. (cervix)	SRR330890(SRX091728) tissue: skin psoriatic uninvolveddisease stat. (skin)	SRR330923(SRX091761) tissue: normal skindisease state: normal. (skin)	TAX577740(Rovira) total RNA. (breast)	SRR037937(GSM510475) 293cand2. (cell line)	SRR189785	SRR039612(GSM531975) Human Normal Liver Tissue Sample 2. (liver)	TAX577739(Rovira) total RNA. (breast)	SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR330899(SRX091737) tissue: skin psoriatic uninvolveddisease stat. (skin)	SRR330919(SRX091757) tissue: normal skindisease state: normal. (skin)	SRR040038(GSM532923) G531N. (cervix)	SRR040012(GSM532897) G648N. (cervix)	GSM450602(GSM450602) miRNA sequencing raw reads from post-mortem s. (brain)	SRR330866(SRX091704) tissue: skin psoriatic involveddisease state:. (skin)	SRR040035(GSM532920) G001T. (cervix)	SRR342896(SRX096792) small RNA seq of Right atrial tissue. (heart)	SRR330895(SRX091733) tissue: skin psoriatic uninvolveddisease stat. (skin)	SRR039637(GSM518474) THP1_total_sRNAs. (cell line)	TAX577743(Rovira) total RNA. (breast)	SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR038852(GSM458535) QF1160MB. (cell line)	SRR330921(SRX091759) tissue: normal skindisease state: normal. (skin)	SRR444059(SRX128907) Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)	SRR330862(SRX091700) tissue: skin psoriatic involveddisease state:. (skin)
............................................................................GGTGGGAGGGGTGGGGTA............................................................................................................................................................	18		6.00	0.00	-	-	-	3.00	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-
.......CGGACGGGGGCGGGGGGGG................................................................................................................................................................................................................................	19		4.00	0.00	-	-	-	-	-	-	3.00	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.....GGCGGACGGGGGCGGGGC...................................................................................................................................................................................................................................	18		3.00	0.00	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.....GGCGGACGGGGGCGGGGCC..................................................................................................................................................................................................................................	19		3.00	0.00	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
................................................................................................................................................................................................TCCACCAGGCTTTCATTAG.......................................	19		1.00	0.00	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
............................................................................GGTGGGAGGGGTGGGGTAT...........................................................................................................................................................	19		1.00	0.00	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.....GGCGGACGGGGGCGGCCCC..................................................................................................................................................................................................................................	19		1.00	0.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-
.....GGCGGACGGGGGCGGGGGCGA................................................................................................................................................................................................................................	21		1.00	0.00	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...................................................................................................................AGGTAGAATCATTTGTAG.....................................................................................................................	18		1.00	0.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.....GGCGGACGGGGGCGGGGCGGA................................................................................................................................................................................................................................	21		1.00	0.00	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
............................................................................................................................................................................................TCCATCCACCAGGCTTTC............................................	18		1.00	0.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.....GGCGGACGGGGGCGGGGCCCC................................................................................................................................................................................................................................	21		1.00	0.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
............................................................................GGTGGGAGGGGTGGGGGAC...........................................................................................................................................................	19		1.00	0.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-
..........................................................................................................................ATCATTTGACATTCTGCGAT............................................................................................................	20		1.00	0.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.....GGCGGACGGGGGCGGGGCCC.................................................................................................................................................................................................................................	20		1.00	0.00	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.....GGCGGACGGGGGCGGGGGC..................................................................................................................................................................................................................................	19		1.00	0.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
..............................................................................TGGGAGGGGTGGGGTAAGG.........................................................................................................................................................	19		1.00	0.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
................................................................................................................................................................................................CAATGAAAGCCTGGTGGA........................................	18	2	0.50	0.50	-	-	-	-	-	-	-	-	-	-	-	-	-	-	0.50	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
......CCCCGCCCCCGTCCGC....................................................................................................................................................................................................................................	16	2	0.50	0.50	-	-	-	-	-	-	-	-	-	-	-	-	-	0.50	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.....CCCGCCCCCGTCCGCC.....................................................................................................................................................................................................................................	16	4	0.25	0.25	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	0.25	-