ID: uc004efp.1_intron_2_0_chrX_91355700_r.3p
GENE: AK125288(1)
chrX:91355650-91355899-


(1)
AGO3.ip
(2)
B-CELL
(1)
BRAIN
(9)
CELL-LINE
(2)
HELA
(1)
LIVER
(1)
OTHER
(1)
SKIN
(1)
TESTES

Sense strand
TTCTAACAACCCAACAATATCACCCCTTACCACAAATCTTCCTTCAGCTTAATCTCTCCCACTCTAGGTTCCCACACTGCCCCTGATCCCGCTTGAAGCAGCCCTGAGAAACATCGTCCATTCTCTCTCCATACCACCCCCCCAAAAATTTTCACCGTCCCAACACTTCAACACTATTTTGTTTTATTTTTCTTATTAAGAAGGCAGGAATGTCAGGCCTCTGAGCCCAAGCCAAGCCATCGCATCCCCT
.............................................................................................((((((((....(((((..........)))))...............................((....))..............))))))))................................................................
.....................................................................................86................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189782SRR553576(SRX182782)
source: Testis. (testes)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
..........................................................................................GCTTGAAGCAGCCCTGGAC.............................................................................................................................................1918.000.0015.003.00-----------------
..........................................................................................GCTTGAAGCAGCCCTGGACC............................................................................................................................................2010.000.008.002.00-----------------
..........................................................................................GCTTGAAGCAGCCCTGGA..............................................................................................................................................185.000.004.001.00-----------------
..........................................................................................GCTTGAAGCAGCCCTGGACA............................................................................................................................................205.000.003.002.00-----------------
..........................................................................................GCTTGAAGCAGCCCTGGACT............................................................................................................................................204.000.002.002.00-----------------
............................................................................................................................................................................................................CAGGAATGTCAGGCCTCTGAGCTCTG....................263.000.00----3.00--------------
..........................................................................................GCTTGAAGCAGCCCTGGATT............................................................................................................................................202.000.001.001.00-----------------
..........................................................................................GCTTGAAGCAGCCCTGGCC.............................................................................................................................................192.000.002.00------------------
....................................................................................................................................................................................................................TCAGGCCTCTGAGCCCAAGCCAAGCCACCGC.......312.000.00--2.00----------------
.........................................................................................CGCTTGAAGCAGCCCTGGA..............................................................................................................................................192.000.002.00------------------
......................................................................CCCACACTGCCCCTGTTC..................................................................................................................................................................181.000.00------1.00------------
..........................................................................................GCTTGAAGCAGCCCTGGAAC............................................................................................................................................201.000.001.00------------------
.........................................................................................CGCTTGAAGCAGCCCTGGACT............................................................................................................................................211.000.001.00------------------
.........................................................................................CGCTTGAAGCAGCCCTGGC..............................................................................................................................................191.000.001.00------------------
..........................................................................................GCTTGAAGCAGCCCTGCACC............................................................................................................................................201.000.00-1.00-----------------
..............................................................................................................................................................................................................................GAGCCCAAGCCAAGCCATCGCATCC...2501.001.00-----------1.00-------
.............................................................................................................................................................................................................AGGAATGTCAGGCCTCTGAGCCCAAGCA.................281.000.00-------1.00-----------
.........................................................................................CGCTTGAAGCAGCCCTGCAAC............................................................................................................................................211.000.001.00------------------
....................................................................................................................................................................................................................TCAGGCCTCTGAGCCCAAGCCAAGCCGC..........281.000.00---1.00---------------
..........................................................................................GCTTGAAGCAGCCCTGT...............................................................................................................................................171.000.00-1.00-----------------
............................................................................................................................................................................................................CAGGAATGTCAGGCCTCTGAGCC.......................2301.001.00---------------1.00---
.........................................................................................CGCTTGAAGCAGCCCGGGA..............................................................................................................................................191.000.00-1.00-----------------
..........................................................................................GCTTGAAGCAGCCCTGGAG.............................................................................................................................................191.000.00-1.00-----------------
..........................................................................................GCTTGAAGCAGCCCTGTACA............................................................................................................................................201.000.00-1.00-----------------
.........................................................................................CGCTTGAAGCAGCCCTGAACC............................................................................................................................................211.000.00-1.00-----------------
..........................................................................................GCTTGAAGCAGCCCTGGGCC............................................................................................................................................201.000.00-1.00-----------------
............................................................................................................................................................................ACTATTTTGTTTTATTTTCTTG........................................................221.000.00------------------1.00
..........................................................................................GCTTGAAGCAGCCCTGTAC.............................................................................................................................................191.000.001.00------------------
.........................................................................................CGCTTGAAGCAGCCCTGTACT............................................................................................................................................211.000.001.00------------------
..........................................................................................GCTTGAAGCAGCCCTGCAC.............................................................................................................................................191.000.001.00------------------
..........................................................................................GCTTGAAGCAGCCCTGGCTC............................................................................................................................................201.000.00-1.00-----------------
..........................................................................................GCTTGAAGCAGCCCTGAAC.............................................................................................................................................191.000.001.00------------------
..........................................................................................GCTTGAAGCAGCCCTGGAT.............................................................................................................................................191.000.00-1.00-----------------
.......................................................................................................................................ACCCCCCCAAAAATTTTG.................................................................................................181.000.00------1.00------------
.........................................................................................CGCTTGAAGCAGCCCTGACC.............................................................................................................................................201.000.00-1.00-----------------
..........................................................................................GCTTGAAGCAGCCCTGGGCT............................................................................................................................................201.000.00-1.00-----------------
..........................................................................................GCTTGAAGCAGCCCTGGAAA............................................................................................................................................201.000.001.00------------------
....................................................................................................................................................................................................................TCAGGCCTCTGAGCCCAAAG..................201.000.00----------1.00--------
.........................................................................................CGCTTGAAGCAGCCCTGGAC.............................................................................................................................................201.000.001.00------------------
..........................................................................................GCTTGAAGCAGCCCTGGGGC............................................................................................................................................201.000.00-1.00-----------------
..........................................................................................GCTTGAAGCAGCCCTGGTC.............................................................................................................................................191.000.001.00------------------

Antisense strand
TTCTAACAACCCAACAATATCACCCCTTACCACAAATCTTCCTTCAGCTTAATCTCTCCCACTCTAGGTTCCCACACTGCCCCTGATCCCGCTTGAAGCAGCCCTGAGAAACATCGTCCATTCTCTCTCCATACCACCCCCCCAAAAATTTTCACCGTCCCAACACTTCAACACTATTTTGTTTTATTTTTCTTATTAAGAAGGCAGGAATGTCAGGCCTCTGAGCCCAAGCCAAGCCATCGCATCCCCT
.............................................................................................((((((((....(((((..........)))))...............................((....))..............))))))))................................................................
.....................................................................................86................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189782SRR553576(SRX182782)
source: Testis. (testes)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
......................................................................................TCCCGCTTGAAGCAGCCCTGAGAAACACT....................................................................................................................................... 292.000.00--2.00----------------
...............................................................................................................................................................................................................................AGCCCAAGCCAAGCCAATT........ 191.000.00-----1.00-------------
................................................................................................................................................................CAACACTTCAACACTATTTTGTTTTAGC.............................................................. 281.000.00--------------1.00----
.......................................................................................................................................................................................................................GGCCTCTGAGCCCAAGCCAAGCCATGG........ 271.000.00---1.00---------------
....................................................................TTCCCACACTGCCCCGAG.................................................................................................................................................................... 181.000.00-----1.00-------------
.............................CCACAAATCTTCCTTCAAAAG........................................................................................................................................................................................................ 211.000.00-------------1.00-----
.............................................................................................................................................................................................................AGGAATGTCAGGCCTCCT........................... 181.000.00--1.00----------------
................................................................................................................................................................................................................................GCCCAAGCCAAGCCATCGCATCCCCTCC 281.000.00---1.00---------------
.....................................................CTCTCCCACTCTAGGTTCCCACACTGCCCCTGCC................................................................................................................................................................... 341.000.00--1.00----------------
................................................................................................AGCAGCCCTGAGAAACATCCG..................................................................................................................................... 211.000.00--1.00----------------
....................................................................................................................................................................................................................TCAGGCCTCTGAGCCCAAGCCAAA.............. 241.000.00---------1.00---------
...........................TACCACAAATCTTCCTGATA........................................................................................................................................................................................................... 201.000.00-----------------1.00-
....................................................................................................................................................TTTTCACCGTCCCAACA..................................................................................... 171.000.00--------1.00----------
........................................AACCTAGAGTGGGAGAGATTAAGCTGAAGG.................................................................................................................................................................................... 3001.001.00------------1.00------
......................................................................................TCCCGCTTGAAGCAGCCCTGAGAAACATC....................................................................................................................................... 291.000.00--1.00----------------
..............................................................................................................................................................................................................GGAATGTCAGGCCTCTGAGCCCAGTCT................. 271.000.00---1.00---------------
...........................................................................................................................................................................................................................TCTGAGCCCAAGCCAAGCCATCGCC...... 251.000.00---1.00---------------
......................................................................................................................................................................................................................AGGCCTCTGAGCCCAAGCCAAGCCATAC........ 281.000.00--1.00----------------
................................................................................................AGCAGCCCTGAGAAACATCGTC.................................................................................................................................... 221.000.00--1.00----------------
........................................................................................................................................................................................................................GCCTCTGAGCCCAAGCCAAA.............. 201.000.00----------------1.00--
....................AAGGAAGATTTGTGGTAAGGGGTG.............................................................................................................................................................................................................. 2460.170.17---0.17---------------
......................TGAAGGAAGATTTGTGGTAAGGGG............................................................................................................................................................................................................ 2460.170.17-------0.17-----------