ID: uc004dyy.42
GENE: MED12(43)
chrX:70361533-70361782+


(2)
AGO1.ip
(1)
AGO1.ip OTHER.mut
(5)
AGO2.ip
(20)
B-CELL
(14)
BRAIN
(14)
BREAST
(50)
CELL-LINE
(3)
CERVIX
(2)
FIBROBLAST
(4)
HEART
(3)
HELA
(6)
LIVER
(4)
OTHER
(1)
RRP40.ip
(25)
SKIN
(1)
TESTES
(4)
UTERUS
(1)
XRN.ip

Sense strand
ATCTCAGCTACTCAAGAGGCTGAGGCAGAGAATTGCTTGAACTTGGGAGGCAGAGGTTGCAGTGAGCCAAGATCATGCCACTGCACTCCAGCCTGGGGGACAGAGCGAGACTCCATCTCAAAAAAAAAAACGGATTGGGAAAGGAGGTTGAAGAAGGAGAAAAGTTCGACTTCAGTCTTCCACTTCCTATTTCCACCCAGTTCCAGCGCCAGGGGCTTCAGCAGACCCAGCAGCAGCAACAGACAGCAGC
...................................................................................................................................((..(((((((((((((.(((((..(((...........)))..))))).))))))).)))))).))....................................................
............................................................................................................................125........................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR189782SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR038861(GSM458544)
MM466. (cell line)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189784SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)
SRR189786SRR207116(GSM721078)
Nuclear RNA. (cell line)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
TAX577740(Rovira)
total RNA. (breast)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577745(Rovira)
total RNA. (breast)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR029127(GSM416756)
A549. (cell line)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577453(Rovira)
total RNA. (breast)
SRR038862(GSM458545)
MM472. (cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037935(GSM510473)
293cand3. (cell line)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR189787SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR038855(GSM458538)
D10. (cell line)
SRR029128(GSM416757)
H520. (cell line)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR038863(GSM458546)
MM603. (cell line)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR038856(GSM458539)
D11. (cell line)
GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR040018(GSM532903)
G701N. (cervix)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR029124(GSM416753)
HeLa. (hela)
SRR037936(GSM510474)
293cand1. (cell line)
TAX577580(Rovira)
total RNA. (breast)
SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)
SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)
SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)
SRR189783SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
GSM956925PazD5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577739(Rovira)
total RNA. (breast)
TAX577741(Rovira)
total RNA. (breast)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)
SRR040022(GSM532907)
G575N. (cervix)
SRR038859(GSM458542)
MM386. (cell line)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
TAX577742(Rovira)
total RNA. (breast)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR191624(GSM715734)
31genomic small RNA (size selected RNA from t. (breast)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577579(Rovira)
total RNA. (breast)
SRR038857(GSM458540)
D20. (cell line)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR191393(GSM715503)
22genomic small RNA (size selected RNA from t. (breast)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
TAX577738(Rovira)
total RNA. (breast)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR038853(GSM458536)
MELB. (cell line)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040015(GSM532900)
G623T. (cervix)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
.................................................................................................................................ACGGATTGGGAAAGGAGGTTGA...................................................................................................22166.0066.00---6.002.001.00-2.002.001.003.002.00--2.00--3.00-2.00-2.00-2.00--1.00-2.00--1.002.001.003.002.00---1.00-------3.00--2.002.00----1.00---1.00---1.00--1.00------1.001.002.001.00-1.00-1.00--1.001.00---------------------------------1.001.00---------------------1.00------------
.....................................................................................................................................ATTGGGAAAGGAGGTTGAAGA................................................................................................21126.0026.0013.00--1.00---1.00--------1.00------------------------1.00-------2.00---------------1.00--------------------1.00--------1.00---------------------------1.00----------1.00---1.00-----1.00----------
......................................................................................................................................TTGGGAAAGGAGGTTGAAGA................................................................................................20119.0019.0010.00----1.00-----------1.00-1.00-------------------------3.00--1.00-------------1.00----------------------------------------------------------------------------1.00---------------
.................................................................................................................................ACGGATTGGGAAAGGAGGTTG....................................................................................................21117.0017.00----2.00---3.00-1.00-1.002.001.00--------------1.00--------------1.00---------------------------------------------1.00-1.00----1.00-----------------1.00----------1.00----------------------------
.................................................................................................................................ACGGATTGGGAAAGGAGGTTGAA..................................................................................................23116.0016.00-----1.00----1.002.00----2.00------1.00--1.00---1.00-------------1.00------1.001.00----------1.00---------------------1.00---------------------1.00-----------------------------------1.00-----------
......................................................................................................................................TTGGGAAAGGAGGTTGAAGAAGGA............................................................................................24111.0011.003.00--------1.00---1.00--1.00------------1.00------1.00----------------1.00------------1.00-----------1.00----------------------------------------------------------------------------
..................................................................................................................................CGGATTGGGAAAGGAGGTTGAAGA................................................................................................24110.0010.004.00-------------1.00-----------------------------------1.00-2.00------------1.00---------------------------------------------------------------------1.00-------------------
......................................................................................................................................TTGGGAAAGGAGGTTGAAG.................................................................................................19110.0010.006.00-----------------------------1.00-------------------------------------------1.00--1.00------------------------------------------------------1.00----------------------
.......................................................................................................................................TGGGAAAGGAGGTTGAAGAAGGA............................................................................................2319.009.00---------3.00---1.00------2.00-------------------------------------------1.00-------1.00--------------------------------------------------------------------1.00-------------
..................................................................................................................................CGGATTGGGAAAGGAGGTTGAAG.................................................................................................2318.008.002.00----1.00-2.00----1.00---1.00-------1.00----------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................CGGATTGGGAAAGGAGGTTGA...................................................................................................2118.008.00-----1.00------1.00-------------------1.00--1.00----------1.00----------------------------------------------------1.00-----------------------------------------------1.00---1.00---
......................................................................................................................................TTGGGAAAGGAGGTTGAAGAAG..............................................................................................2217.007.004.00------------------------1.00--------------------------------------------1.00-------------------------------------------1.00----------------------------------------
.......................................................................................................................................TGGGAAAGGAGGTTGAAGAAGG.............................................................................................2217.007.002.00--------1.00--------------------------------1.00--------------------------1.00---------1.00------------------------------------1.00--------------------------------------
.................................................................................................................................................................................TTCCACTTCCTATTTCCACCCAGT.................................................2417.007.00------1.00----------------------------------------------------2.00------------------------------------1.00---1.00---1.00----------------------------------------1.00---------
..................................................................................................................................................................................TCCACTTCCTATTTCCACCCAGT.................................................2315.005.00---------------------------------------------------------1.00--------------------1.00----------1.00----------------------------1.00------------------------------1.00-----
.....................................................................................................................................ATTGGGAAAGGAGGTTGAAG.................................................................................................2015.005.001.00----1.00--1.00----------1.00-----------------------------------------------------------------------------------------------------1.00---------------------------------
..................................................................................................................................CGGATTGGGAAAGGAGGTTGAA..................................................................................................2215.005.00----------1.00---1.00-----1.00--------------------------------1.00---------------------------------------1.00-------------------------------------------------------------
....................................................................................................................................GATTGGGAAAGGAGGTTGAAGA................................................................................................2215.005.00-----2.00-1.00--------------------1.00---------------------------1.00--------------------------------------------------------------------------------------------------
.................................................................................................................................ACGGATTGGGAAAGGAGGTTGAAGA................................................................................................2515.005.00----------------1.00------------2.00-------------------------------------1.00--------------------1.00------------------------------------------------------------------
.................................................................................................................................ACGGATTGGGAAAGGAGGTT.....................................................................................................2015.005.00---3.001.00-----------------------------------1.00------------------------------------------------------------------------------------------------------------------
......................................................................................................................................TTGGGAAAGGAGGTTGAAGAAA..............................................................................................2215.004.00-------3.00---------------------------------------------------------------------------------------------1.00----------------------------------------------1.00------
.................................................................................................................................ACGGATTGGGAAAGGAGGT......................................................................................................1914.004.00---------------3.00------------------------1.00------------------------------------------------------------------------------------------------------------------
....................................................................................................................................GATTGGGAAAGGAGGTTGAAG.................................................................................................2114.004.00-----1.00---------------3.00-------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................TGGGAAAGGAGGTTGAAG.................................................................................................1814.004.004.00----------------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................TTCCACTTCCTATTTCCACCCA...................................................2214.004.00----1.00-2.00-----------------------------------------------------------------------------------------------------------------------------------------------1.00----
......................................................................................................................................TTGGGAAAGGAGGTTGAAGAA...............................................................................................2114.004.004.00----------------------------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................AACGGATTGGGAAAGGAGGTTG....................................................................................................2214.004.00------------------------------------------1.00-------------------------1.00-------------------------------------------------------------------1.00---1.00--------------
................................................................................................................................AACGGATTGGGAAAGGAGGTTGA...................................................................................................2313.003.00-----1.00--1.00---------------1.00----------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................ACGGATTGGGAAAGGAGGTTGAAA.................................................................................................2413.0016.00--------------1.00------------------------------------------------------------1.00-----------------------------------------1.00-------------------------------------
.....................................................................................................................................ATTGGGAAAGGAGGTTGAAGAAA..............................................................................................2313.001.00-------------------------3.00---------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................ACGGATTGGGAAAGGAGGTTAA...................................................................................................2213.005.00----3.00------------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................TTCCACTTCCTATTTCCACCCAG..................................................2313.003.00------------------1.00-----------------------------------------------------------------------------------1.001.00---------------------------------------------------
...................................................................................................................................................................................CCACTTCCTATTTCCACCCAG..................................................2113.003.00------------------3.00----------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................TGGGAAAGGAGGTTGAAGAAGGT............................................................................................2313.007.00---3.00-------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................CGGATTGGGAAAGGAGGTTGAAA.................................................................................................2312.005.00----2.00------------------------------------------------------------------------------------------------------------------------------------------------------
..................GCTGAGGCAGAGAATTG.......................................................................................................................................................................................................................1702.002.00---------------------------2.00-------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................TTGGGAAAGGAGGTTGAAGAAGG.............................................................................................2312.002.00--------------------------------------------------------------------------------------------------1.00------1.00-------------------------------------------------
...........................................................................................CCTGGGGGACAGAGCGAGACTAA........................................................................................................................................232.000.00----------------------------------------------------------2.00------------------------------------------------------------------------------------------------
.................................................................................................................................ACGGATTGGGAAAGGAGGTTGAAAA................................................................................................2512.0016.00----------------------------------------------2.00------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................TTCCACTTCCTATTTCCACT.....................................................202.000.00------2.00----------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................TCCAGCCTGGGGGACAGAGCGAGCTG..........................................................................................................................................262.000.00-2.00---------------------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................GGGAAAGGAGGTTGAAGAAGGAA...........................................................................................2312.002.00-----1.00--------------------1.00--------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................ATTGGGAAAGGAGGTTGAT..................................................................................................192.000.00---------------------------------2.00-------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................GGGAAAGGAGGTTGAAGAAGGA............................................................................................2212.002.001.00------------1.00---------------------------------------------------------------------------------------------------------------------------------------------
.....................................TGAACTTGGGAGGCAGAGGTTGCGAGC..........................................................................................................................................................................................272.000.00-2.00---------------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................ACGGATTGGGAAAGGAGGTTGAAG.................................................................................................2412.002.00-------------------------------------------------------------1.00--------------------------------------------------------------1.00------------------------------
......................................................................................................................................TTGGGAAAGGAGGTTGAAGAAGGT............................................................................................2412.002.00-------------------------------------------------1.00------------------1.00--------------------------------------------------------------------------------------
.................................................................................................................................ACGGATTGGGAAAGGAGGGTGG...................................................................................................2212.001.00--------1.00-1.00------------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................GGGAAAGGAGGTTGAAGAAGGATC..........................................................................................2412.002.00-----------2.00-----------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................ACGGATTGGGAAAGGAGGTTGAAGATT..............................................................................................2712.005.00---------------------------1.00--------------------------------------------1.00----------------------------------------------------------------------------------
.................................................................................................................................ACGGATTGGGAAAGGAGGGTG....................................................................................................2112.001.00------------1.00--------------------------1.00-------------------------------------------------------------------------------------------------------------------
.................................................................................................................................ACGGATTGGGAAAGGAGGTTA....................................................................................................2111.005.00------------------------------------1.00----------------------------------------------------------------------------------------------------------------------
...........................................................................................CCTGGGGGACAGAGCGAGACTCCACG.....................................................................................................................................261.000.00--1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................TTCCACTTCCTATTTCCACCAAG..................................................231.000.00------1.00----------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................ACGGATTGGGAAAGGAGGTTGAAGAA...............................................................................................2611.001.00------------------------------------------1.00----------------------------------------------------------------------------------------------------------------
.................................................................................................................................ACGGATTGGGAAAGGAGGTTGC...................................................................................................2211.0017.00------------1.00----------------------------------------------------------------------------------------------------------------------------------------------
............................AGAATTGCTTGAACTTGGGAGATAA.....................................................................................................................................................................................................251.000.00--------------------------1.00--------------------------------------------------------------------------------------------------------------------------------
......................................................................................TCCAGCCTGGGGGACAGAGCGAGACCGCG.......................................................................................................................................291.000.00-1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
..................................GCTTGAACTTGGGAGGCATC....................................................................................................................................................................................................201.000.00-----------------------------------------------------------------------------------1.00-----------------------------------------------------------------------
.................................................................................................................................ACGGATTGGGAAAGGAGGTTT....................................................................................................2111.005.00----------------------------------------------------------------------------------------------------------------1.00------------------------------------------
.................................................................................................................................................................................TTCCACTTCCTATTTCCACCCAGC.................................................2411.003.00----------------------1.00------------------------------------------------------------------------------------------------------------------------------------
.......................................AACTTGGGAGGCAGAGGGACA..............................................................................................................................................................................................211.000.00--1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................ACGGATTGGGAAAGGAGGTTGAAT.................................................................................................2411.0016.00-------------------------------------------------------1.00---------------------------------------------------------------------------------------------------
.........................................................................................AGCCTGGGGGACAGAGCGAGACCGTC.......................................................................................................................................261.000.00--1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................ACGGATTGGGAAAGGAGGTTGT...................................................................................................2211.0017.00------------------------------------1.00----------------------------------------------------------------------------------------------------------------------
....................................TTGAACTTGGGAGGCAGAGGT.................................................................................................................................................................................................2101.001.00-----------------------------------------------------------------------1.00-----------------------------------------------------------------------------------
.................................................................................................................................................................................TTCCACTTCCTATTTCCACCTAG..................................................231.000.00------1.00----------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................TGGGAAAGGAGGTTGAAGAAGGAT...........................................................................................2411.009.00--------------------1.00--------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................ACGGATTGGGAAAGGAGGAGGA...................................................................................................2211.001.00------------------------------------------------------------1.00----------------------------------------------------------------------------------------------
............................................................................................................................................AAGGAGGTTGAAGAAGGAGAAAAGT.....................................................................................2511.001.00------------------------------------------------------------------1.00----------------------------------------------------------------------------------------
........................................................................................................................................GGGAAAGGAGGTTGAAGAAGG.............................................................................................2111.001.00----------------------------------------------------------------------------------------------1.00------------------------------------------------------------
.................................................................................................................................ACGGATTGGGAAAGGGC........................................................................................................171.000.00-------------------------------------------------------------1.00---------------------------------------------------------------------------------------------
.........................................................................................AGCCTGGGGGACAGAGCGAGACTATCG......................................................................................................................................271.000.00--1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................ACGGATTGGGAAAGGAGGTTGCAG.................................................................................................2411.0017.00-------------------------------------1.00---------------------------------------------------------------------------------------------------------------------
........................................................TTGCAGTGAGCCAAGATCATGCCCGC........................................................................................................................................................................261.000.00-1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................ATTGGGAAAGGAGGTTGAA..................................................................................................1911.001.00-----------------------1.00-----------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................ACGGATTGGGAAAGGAGGTTGAAGT................................................................................................2511.002.00-------------------------------------------------------------------------------------------------------------------------------------1.00---------------------
.....................................................................................CTCCAGCCTGGGGGACAGAGCGAGAGAGA........................................................................................................................................291.000.00-------------------------------------------1.00---------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................TTCCACTTCCTATTTCCACTCA...................................................221.000.00------1.00----------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................CGGATTGGGAAAGGAGGTTGAT..................................................................................................2211.008.00------------------------------------------------------------------------------------1.00----------------------------------------------------------------------
.................................................................................................................................ACGGATTGGGAAAGGAGGGTGA...................................................................................................2211.001.00------------------------1.00----------------------------------------------------------------------------------------------------------------------------------
...................................................................................................ACAGAGCGAGACTCCATCTCAAAAAAAAAAACTAG....................................................................................................................351.000.00----------------------------------------------------------------------------------1.00------------------------------------------------------------------------
..........................AGAGAATTGCTTGAACTTGGGAGGCGGCG...................................................................................................................................................................................................291.000.00---------------------------------1.00-------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................GGAAAGGAGGTTGAAGAA...............................................................................................1811.001.00----------------------------------------1.00------------------------------------------------------------------------------------------------------------------
..............................................................................................GGGGGACAGAGCGAGACTAGAT......................................................................................................................................221.000.00---------1.00-------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................ACGGATTGGGAAAGGAGGTGG....................................................................................................2111.004.00------------1.00----------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................CCAGCAGCAGCAACAGACAGC...2111.001.00-----------------------1.00-----------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................CGGATTGGGAAAGGAGGTTAT...................................................................................................211.000.00---------------------------------------1.00-------------------------------------------------------------------------------------------------------------------
..................................GCTTGAACTTGGGAG.........................................................................................................................................................................................................1501.001.00-------------------------------------1.00---------------------------------------------------------------------------------------------------------------------
.........................................................................................AGCCTGGGGGACAGAGCGAGACTCCACCCC...................................................................................................................................301.000.00-1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................TGGGAAAGGAGGTTGAAGAAGA.............................................................................................2211.001.00---------------------------------------------------------------------1.00-------------------------------------------------------------------------------------
.......................................................................................................................AAAAAAAAAAACGGATTGTC...............................................................................................................201.000.00--------------------------------------1.00--------------------------------------------------------------------------------------------------------------------
.......................................AACTTGGGAGGCAGAGCTA................................................................................................................................................................................................191.000.00--1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................CGGATTGGGAAAGGAGGTTGTGT.................................................................................................231.000.00----------------------------------------------------------------------------------------------------------1.00------------------------------------------------
...................................................................................................................................GGATTGGGAAAGGAGGTTGAAGT................................................................................................231.000.00-------1.00---------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................TTCCACTTCCTATTTCCACCC....................................................2111.001.00------1.00----------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................ACGGATTGGGAAAGGGCC.......................................................................................................181.000.00---------------------------------------------------------------1.00-------------------------------------------------------------------------------------------
.....................................................................................................................................ATTGGGAAAGGAGGTTGAAA.................................................................................................2011.001.00-------------------------------------------------------------------------------------------1.00---------------------------------------------------------------
........................................ACTTGGGAGGCAGAGGTTGCAGTGATTC......................................................................................................................................................................................281.000.00--1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................TGGGAAAGGAGGTTGAAGAAG..............................................................................................2111.001.00--------------------------------1.00--------------------------------------------------------------------------------------------------------------------------
.......................................AACTTGGGAGGCAGAGGTTGCGAG...........................................................................................................................................................................................241.000.00-1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................CGGATTGGGAAAGGAGGTTGTAA.................................................................................................231.000.00-----------------------------------------------------------------------------------------------------------------------------------1.00-----------------------
....................................................................................................................................GATTGGGAAAGGAGGTTG....................................................................................................1811.001.00---------------1.00-------------------------------------------------------------------------------------------------------------------------------------------
......................................GAACTTGGGAGGCAGAGG..................................................................................................................................................................................................1801.001.00------------------------------1.00----------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................TTCCACTTCCTATTTCCACCCAA..................................................2311.004.00--------------------------------------------------------------------------------------------------------------1.00--------------------------------------------
.........................................................................................................................................GGAAAGGAGGTTGAAGAAGGAA...........................................................................................2211.001.00-------------------------------------------------------------------------------------------------------------1.00---------------------------------------------
.......CTACTCAAGAGGCTGAGGCGGGA............................................................................................................................................................................................................................231.000.00--------------------------------------------------------------------------------1.00--------------------------------------------------------------------------
.................................................................................................................................................................................TTCCACTTCCTATTTCCACCCAC..................................................2311.004.00------1.00----------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................TGGGAAAGGAGGTTGAAGAA...............................................................................................2011.001.00---------------1.00-------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................CGGATTGGGAAAGGAGGGTGA...................................................................................................211.000.00-----------------1.00-----------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................AAGGAGAAAAGTTCGGAAC..............................................................................191.000.00------------------------------------------------1.00----------------------------------------------------------------------------------------------------------
...................................CTTGAACTTGGGAGGCA......................................................................................................................................................................................................1701.001.00-----------------------------------------1.00-----------------------------------------------------------------------------------------------------------------
.........................................................................................AGCCTGGGGGACAGAGCGAGACTCCCCCT....................................................................................................................................291.000.00--1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................ACTTCCTATTTCCACCCTCAG................................................211.000.00------------------1.00----------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................TGGGGGACAGAGCGAGAAGC.........................................................................................................................................201.000.00-------------------------------1.00---------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................ACGGATTGGGAAAGGAGG.......................................................................................................1811.001.00---------------1.00-------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................ACGGATTGGGAAAGGAGGTTGAT..................................................................................................2311.0066.00-----------------------------------------------------------------------------------------------------------------------------1.00-----------------------------
.................................................................................................................................................................................TTCCACTTCCTATTTCCACCCATA.................................................2411.004.00----------------------------------------------------------------------1.00------------------------------------------------------------------------------------
......................................................................................................................................................................................................................GCTTCAGCAGACCCAGCAGCAGCAACAGACA.....3111.001.00-----1.00-----------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................TGGGGGACAGAGCGAGAAGA.........................................................................................................................................201.000.00-------------1.00---------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................TGCACTCCAGCCTGGGGGACATAGG................................................................................................................................................251.000.00--1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
................................................................AGCCAAGATCATGCCACTGCACTT..................................................................................................................................................................241.000.00---------------------------------------------------------------------------------------------------------------1.00-------------------------------------------
........................................ACTTGGGAGGCAGAGGTTGCAGTGAGCAAG....................................................................................................................................................................................301.000.00-1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................AGCCTGGGGGACAGAGCGAGACTACAC......................................................................................................................................271.000.00--1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................GGAAAGGAGGTTGAAGAAGGAAA..........................................................................................2311.001.00----------------------------1.00------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................ACGGATTGGGAAAGGAGGTAA....................................................................................................2111.004.00-----------------1.00-----------------------------------------------------------------------------------------------------------------------------------------
..................GCTGAGGCAGAGAATTTCTA....................................................................................................................................................................................................................201.000.00--------------------------------------------------------------------------------------------------------------------------------------------------1.00--------
.............................................................................................................................................................................AGTCTTCCACTTCCTATTTCCA.......................................................2211.001.00---------------------------------------------------------------------------------------------------------------------------------------------------------1.00-
..............................AATTGCTTGAACTTGGGAGGCAGAGGTCGC..............................................................................................................................................................................................301.000.00------------------------------------------------------1.00----------------------------------------------------------------------------------------------------
...................................CTTGAACTTGGGAGGCAG.....................................................................................................................................................................................................1801.001.00-------------------------------------1.00---------------------------------------------------------------------------------------------------------------------
.................................................................................................................................ACGGATTGGGAAAGGAG........................................................................................................1711.001.00------------1.00----------------------------------------------------------------------------------------------------------------------------------------------
..............................AATTGCTTGAACTTGGGAGGCAGAGGCTTG..............................................................................................................................................................................................301.000.00------------------------------------------------------1.00----------------------------------------------------------------------------------------------------
......................................................................................................................................TTGGGAAAGGAGGTTGAAGAAGGAT...........................................................................................2511.0011.00--------------------------------------------1.00--------------------------------------------------------------------------------------------------------------
........TACTCAAGAGGCTGACG.................................................................................................................................................................................................................................171.000.00--------------------------------------------------------------------------------1.00--------------------------------------------------------------------------
..........................................TTGGGAGGCAGAGGTTGCGAGC..........................................................................................................................................................................................221.000.00-1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................CCAGGGGCTTCAGCAGACCCAGCA..................2411.001.00----1.00------------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................ACGGATTGGGAAAGGAGGTTGATA.................................................................................................2411.0066.00--------------------1.00--------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................CCAGCCTGGGGGACAGAGCGAGAGAGA........................................................................................................................................271.000.00-------------------------------------------1.00---------------------------------------------------------------------------------------------------------------
..................................................................................GCACTCCAGCCTGGGGGGGG....................................................................................................................................................201.000.00--------------------------------------------------------------------------------------------------------------------------------------------------------1.00--
.................................TGCTTGAACTTGGGAGGCAGAGGTAGC..............................................................................................................................................................................................271.000.00--1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................TGGGAAAGGAGGTTGAAGAAGGAA...........................................................................................2411.009.00-----------------------------------------------------------------------------------------------------------------------------------------1.00-----------------
........TACTCAAGAGGCTGAGGAG...............................................................................................................................................................................................................................191.000.00-------------------------------------------------------------------------1.00---------------------------------------------------------------------------------
.....................................................................................................................................ATTGGGAAAGGAGGTTGAAGAA...............................................................................................2211.001.00----------------------------------------------------------------------------------------------------------------------------------1.00------------------------
.............................................................................................................ACTCCATCTCAAAAAAAAAAACGGATTGG................................................................................................................2911.001.00--------------------------------------------------------------------------------------------------------------------------------1.00--------------------------
.........................................................................................................................................GGAAAGGAGGTTGAAGAAGGA............................................................................................2111.001.00-----------1.00-----------------------------------------------------------------------------------------------------------------------------------------------
................AGGCTGAGGCAGAGAATTGCAA....................................................................................................................................................................................................................221.000.00-------------------------------------------------------------------------------------------------------------------------------1.00---------------------------
........................................................................................CAGCCTGGGGGACAGAGCGAGCTG..........................................................................................................................................241.000.00--1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
..........................AGAGAATTGCTTGAACTTGGGAGGCAGAGGTC................................................................................................................................................................................................321.000.00-1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
..............................AATTGCTTGAACTTGGGAGGTC......................................................................................................................................................................................................221.000.00-----------------------------------------------------------------------------------------------------------------1.00-----------------------------------------
................................................................................................................................AACGGATTGGGAAAGGAGGTT.....................................................................................................2111.001.00------------------------1.00----------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................AAGGAGAAAAGTTCGAAC...............................................................................181.000.00------------------------------------------------1.00----------------------------------------------------------------------------------------------------------
....................................................................................ACTCCAGCCTGGGGGACAGAGCGAGACTCAT.......................................................................................................................................311.000.00-1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
........................................ACTTGGGAGGCAGAGGTTGCAGTGAGCAGAA...................................................................................................................................................................................311.000.00-1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................AGGAGGTTGAAGAAGGAG...........................................................................................1840.250.25---------------------------------------------------------------------------------------0.25-------------------------------------------------------------------

Antisense strand
ATCTCAGCTACTCAAGAGGCTGAGGCAGAGAATTGCTTGAACTTGGGAGGCAGAGGTTGCAGTGAGCCAAGATCATGCCACTGCACTCCAGCCTGGGGGACAGAGCGAGACTCCATCTCAAAAAAAAAAACGGATTGGGAAAGGAGGTTGAAGAAGGAGAAAAGTTCGACTTCAGTCTTCCACTTCCTATTTCCACCCAGTTCCAGCGCCAGGGGCTTCAGCAGACCCAGCAGCAGCAACAGACAGCAGC
...................................................................................................................................((..(((((((((((((.(((((..(((...........)))..))))).))))))).)))))).))....................................................
............................................................................................................................125........................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR189782SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR038861(GSM458544)
MM466. (cell line)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189784SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)
SRR189786SRR207116(GSM721078)
Nuclear RNA. (cell line)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
TAX577740(Rovira)
total RNA. (breast)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577745(Rovira)
total RNA. (breast)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR029127(GSM416756)
A549. (cell line)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577453(Rovira)
total RNA. (breast)
SRR038862(GSM458545)
MM472. (cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037935(GSM510473)
293cand3. (cell line)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR189787SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR038855(GSM458538)
D10. (cell line)
SRR029128(GSM416757)
H520. (cell line)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR038863(GSM458546)
MM603. (cell line)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR038856(GSM458539)
D11. (cell line)
GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR040018(GSM532903)
G701N. (cervix)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR029124(GSM416753)
HeLa. (hela)
SRR037936(GSM510474)
293cand1. (cell line)
TAX577580(Rovira)
total RNA. (breast)
SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)
SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)
SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)
SRR189783SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
GSM956925PazD5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577739(Rovira)
total RNA. (breast)
TAX577741(Rovira)
total RNA. (breast)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)
SRR040022(GSM532907)
G575N. (cervix)
SRR038859(GSM458542)
MM386. (cell line)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
TAX577742(Rovira)
total RNA. (breast)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR191624(GSM715734)
31genomic small RNA (size selected RNA from t. (breast)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577579(Rovira)
total RNA. (breast)
SRR038857(GSM458540)
D20. (cell line)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR191393(GSM715503)
22genomic small RNA (size selected RNA from t. (breast)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
TAX577738(Rovira)
total RNA. (breast)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR038853(GSM458536)
MELB. (cell line)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040015(GSM532900)
G623T. (cervix)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
................................................................................CTGCACTCCAGCCTGGGGGACAGGC................................................................................................................................................. 252.000.00-1.001.00--------------------------------------------------------------------------------------------------------------------------------------------------------
......................AGGCAGAGAATTGCTTGAAAAA.............................................................................................................................................................................................................. 222.000.00--------------------------------------2.00--------------------------------------------------------------------------------------------------------------------
...............................................AGGCAGAGGTTGCAGTGAGCCAAGATAGGC............................................................................................................................................................................. 302.000.00-2.00---------------------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................CACTGCACTCCAGCCTGGGGGATCT................................................................................................................................................... 252.000.00-1.00--------------------1.00------------------------------------------------------------------------------------------------------------------------------------
...............................................AGGCAGAGGTTGCAGTGAGCCAAGGT................................................................................................................................................................................. 261.000.00--1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
..............................................GAGGCAGAGGTTGCAGTGAGCCAGACG................................................................................................................................................................................. 271.000.00--1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
................AGGCTGAGGCAGAGAATGGAG..................................................................................................................................................................................................................... 211.000.00--1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................CTTGGGAGGCAGAGGTTGCAGTGAGCCACG................................................................................................................................................................................... 301.000.00-1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................TCAAAAAAAAAAACGGCG................................................................................................................... 181.000.00----------------------------------------------------------------------------------1.00------------------------------------------------------------------------
...............................................AGGCAGAGGTTGCAGTGAGCCAAGATAGGT............................................................................................................................................................................. 301.000.00-1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................CTTGGGAGGCAGAGGTTGCAAG........................................................................................................................................................................................... 221.000.00-1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................AGGCAGAGGTTGCAGTGAGCCAAAA.................................................................................................................................................................................. 251.000.00-------------------1.00---------------------------------------------------------------------------------------------------------------------------------------
...................CTGAGGCAGAGAATTGCTACTG................................................................................................................................................................................................................. 221.000.00-----------------------------------------------------------------------------------1.00-----------------------------------------------------------------------
..............................................................................CACTGCACTCCAGCCTGGGGGATTC................................................................................................................................................... 251.000.00----------------------1.00------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................CTCCAGCCTGGGGGACAGAGCGAGAG........................................................................................................................................... 261.000.00-1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................GTTGCAGTGAGCCAAGATCATGCCGTCA....................................................................................................................................................................... 281.000.00---------------------------------------------------------------------------------1.00-------------------------------------------------------------------------
...............................................................................................GGGGACAGAGCGAGACTTTGG...................................................................................................................................... 211.000.00--1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................GCACTCCAGCCTGGGGGACTCTG................................................................................................................................................. 231.000.00------------------------------------------------------------------------------------------------------------1.00----------------------------------------------
...............................................................................ACTGCACTCCAGCCTGGGGGACACACC................................................................................................................................................ 271.000.00-1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
............................................................................GCCACTGCACTCCAGCCTGGGGT....................................................................................................................................................... 231.000.00---------------------------------------------------------------------------------------------------------------------------------1.00-------------------------
..................................................................CCAAGATCATGCCACTGCACTCCAA............................................................................................................................................................... 251.000.00-----------------------------------------1.00-----------------------------------------------------------------------------------------------------------------
........................................................................................CAGCCTGGGGGACAGAGCGAGACTCCAC...................................................................................................................................... 281.000.00-1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................CCAAGATCATGCCACTGCAAAAA................................................................................................................................................................. 231.000.00-------------------------------1.00---------------------------------------------------------------------------------------------------------------------------
......................................GAACTTGGGAGGCAGAGGTTGCAGGGGC........................................................................................................................................................................................ 281.000.00-------------------------------------------1.00---------------------------------------------------------------------------------------------------------------
....................................................................................................CAGAGCGAGACTCCATCTCAAA................................................................................................................................ 221.000.00------------------------------1.00----------------------------------------------------------------------------------------------------------------------------
................AGGCTGAGGCAGAGAATGTCG..................................................................................................................................................................................................................... 211.000.00-1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................CCAAGATCATGCCACTGCAAT................................................................................................................................................................... 211.000.00--------------------------------------------------------------------------------------------------------------------------1.00--------------------------------
...............................................................................ACTGCACTCCAGCCTGGGGCACC.................................................................................................................................................... 231.000.00--1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................CATGCCACTGCACTCCAGCCTCCCC........................................................................................................................................................ 251.000.00-1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................GCCTGGGGGACAGAGCGAGACTGGA....................................................................................................................................... 251.000.00-1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................CTTGGGAGGCAGAGGTTGCAGTCTA........................................................................................................................................................................................ 251.000.00----------------------1.00------------------------------------------------------------------------------------------------------------------------------------
......................................................................GATCATGCCACTGCACTCCAGCCTGGGGCCTG.................................................................................................................................................... 321.000.00------------------------------------------------------1.00----------------------------------------------------------------------------------------------------
................................................................AGCCAAGATCATGCCACTGGAAA................................................................................................................................................................... 231.000.00---------------------------------------------------------1.00-------------------------------------------------------------------------------------------------
.............................................................................CCACTGCACTCCAGCCTGGGGAAAC.................................................................................................................................................... 251.000.00--------------------------------------------------------------1.00--------------------------------------------------------------------------------------------
...............................................AGGCAGAGGTTGCAGTGAGCCAAGG.................................................................................................................................................................................. 251.000.00--1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
............................................................AGTGAGCCAAGATCATGCC........................................................................................................................................................................... 191.000.00-------------------------------------------------------------------------1.00---------------------------------------------------------------------------------
..................................................................................GCACTCCAGCCTGGGGGACAGAGCGAGGCA.......................................................................................................................................... 301.000.00-1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
..............................................................TGAGCCAAGATCATGCCACTGCACAAAA................................................................................................................................................................ 281.000.00-------------------------------------------------------1.00---------------------------------------------------------------------------------------------------
............................................................................GCCACTGCACTCCAGCCTGGGGGTCGC................................................................................................................................................... 271.000.00-1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................TATTTCCACCCAGTTCCA............................................. 181.000.00-----------------------------------------------------1.00-----------------------------------------------------------------------------------------------------
...........................................................CAGTGAGCCAAGATCATGCCGGT........................................................................................................................................................................ 231.000.00------------------------1.00----------------------------------------------------------------------------------------------------------------------------------
..................................................................................GCACTCCAGCCTGGGGGACAGAGCGAGGGCG......................................................................................................................................... 311.000.00-1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................TCTCAAAAAAAAAAACGGCGG.................................................................................................................. 211.000.00-1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................GCCAAGATCATGCCACTGCAG.................................................................................................................................................................... 211.000.00--1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................ACTCCAGCCTGGGGGACACCAC................................................................................................................................................ 221.000.00-------------------------------1.00---------------------------------------------------------------------------------------------------------------------------
..............................................................................CACTGCACTCCAGCCTGGGGGATAC................................................................................................................................................... 251.000.00----------------------1.00------------------------------------------------------------------------------------------------------------------------------------
.........................CAGAGAATTGCTTGAAG................................................................................................................................................................................................................ 171.000.00---------------------------1.00-------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................AGTCTTCCACTTCCTTTGT.......................................................... 191.000.00---------------------------------------------------------------------------------------1.00-------------------------------------------------------------------
......GCTACTCAAGAGGCTGAGAGGG.............................................................................................................................................................................................................................. 221.000.00-----------------------------------------------------------------------1.00-----------------------------------------------------------------------------------
.........................................................................CATGCCACTGCACTCCAGCCTCGGC........................................................................................................................................................ 251.000.00-1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................CAAAAAAAAAAACGGAGGGA................................................................................................................ 201.000.00-1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................CGTTTTTTTTTTTGAGATGGAGTCTCGC...................................................................................................................... 2830.330.33-0.33---------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................TGCTGCTGCTGGGTCTGCT............ 1940.250.25--------------------------------------------------------------------------------------0.25--------------------------------------------------------------------
.....................................................................................................................................................................................................................................CTGTCTGTTGCTGCTGC.... 1740.250.25----------------------------------------------------------------------------------------------------------------------------------------------------------0.25