| (1) BRAIN | (1) BREAST | (6) CELL-LINE | (2) HEART | (2) HELA | (3) LIVER | (1) OTHER | (7) SKIN | (1) XRN.ip |
| AAGTTAATTGCCTGTGGTCACAAGACTAGTTTTTGTAATTTTAGGGTGAGGCACTCTAACATTATCTGTAATAGCACCATGTAAACAGTCATAGCCACTTGATGTGAAATTGACCAAGACTGACTAGATAGGCCTTAACATTGTCCAATTGTAGAAGAGGTTTATTTTGTTTTTGATGGTTGTTACTGTTTTCCTAGCAGATAAATCTGATCCTAAACCTGGGGTTATGACCCAAGAGGTTGGCCAGCTC .........................................................................((.......(((((((.(((((((((((.............))))...(((.(((((((((((.(((.........)))....))))))))))).))).....))))))).))))))).....)).................................................... ..................................................................67...................................................................................................................................200................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR189784 | SRR189782 | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR039615(GSM531978) Severe Chronic Hepatitis B Liver Tissue. (liver) | SRR029131(GSM416760) MCF7. (cell line) | SRR189786 | SRR039622(GSM531985) HCV(+) Adjacent Tissue Sample. (liver) | DRR001485(DRX001039) "Hela long total cell fraction, LNA(+)". (hela) | SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver) | DRR001487(DRX001041) "Hela long nuclear cell fraction, LNA(+)". (hela) | SRR029054(GSM402329) MCF7_smallRNAseq. (cell line) | SRR330873(SRX091711) tissue: skin psoriatic involveddisease state:. (skin) | SRR037935(GSM510473) 293cand3. (cell line) | SRR330914(SRX091752) tissue: normal skindisease state: normal. (skin) | SRR553572(SRX182778) source: Frontal Cortex. (Frontal Cortex) | SRR189787 | SRR330917(SRX091755) tissue: normal skindisease state: normal. (skin) | SRR330919(SRX091757) tissue: normal skindisease state: normal. (skin) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR342900(SRX096796) small RNA seq of Right atrial tissue. (heart) | SRR330915(SRX091753) tissue: normal skindisease state: normal. (skin) | GSM450599(GSM450599) miRNA sequencing raw reads from post-mortem s. (brain) | SRR330893(SRX091731) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR342896(SRX096792) small RNA seq of Right atrial tissue. (heart) | TAX577745(Rovira) total RNA. (breast) | SRR330878(SRX091716) tissue: skin psoriatic involveddisease state:. (skin) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .......................................................................TAGCACCATGTAAACATTG................................................................................................................................................................ | 19 | 12.00 | 0.00 | 12.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................................TGGTTGTTACTGTTTTCCTAGCAG.................................................. | 24 | 1 | 4.00 | 4.00 | - | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................ACCCAAGAGGTTGGCCAGCT. | 20 | 1 | 3.00 | 3.00 | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................TAGCACCATGTAAACACAG................................................................................................................................................................ | 19 | 2.00 | 0.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................TAGGCCTTAACATTGTCCAATTGTAGAAGAGGTTTATTTTGTTTTTGATGGTTGTTACTGTTTTCCTAGCAG.................................................. | 72 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................TAGGCCTTAACATTGTCCAATTGTAGAAGAGGTTTATTTTGTTTTTGATGGTTGTTACTGTT............................................................ | 62 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................TAGCACCATGTAAACATTC................................................................................................................................................................ | 19 | 2.00 | 0.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................................................................TGTGAAATTGACCAAGACGAG............................................................................................................................... | 21 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................GACCAAGACTGACTAGATAGGCA.................................................................................................................... | 23 | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................TAGCACCATGTAAACATAT................................................................................................................................................................ | 19 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................TGACTAGATAGGCCTTAACATT............................................................................................................ | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ...............................................................................................................GACCAAGACTGACTAGATAGGCC.................................................................................................................... | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................AGGTTTATTTTGTTTTTGATGGTC..................................................................... | 24 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................................................................................................................................CAAGAGGTTGGCCAGTTGG | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | |
| ........................................TTAGGGTGAGGCACTCTAAAA............................................................................................................................................................................................. | 21 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................CTAGATAGGCCTTAACATTGTCCAATTGTAG................................................................................................ | 31 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................ATTGTAGAAGAGGTTTATTT................................................................................... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ...................................................................................................................................................................................................................................TGACCCAAGAGGTTGG....... | 16 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| .......................................................................TAGCACCATGTAAACTTAG................................................................................................................................................................ | 19 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................TAGCACCATGTAAACTCAG................................................................................................................................................................ | 19 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................................GTGAAATTGACCAAGACTGACTAGATAGGCTT................................................................................................................... | 32 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......ATTGCCTGTGGTCACAAGACT............................................................................................................................................................................................................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .......................................................................TAGCACCATGTAAACCTTG................................................................................................................................................................ | 19 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................TAGCACCATGTAAACCGG................................................................................................................................................................. | 18 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................................................................AGACTGACTAGATAGGCCTTAA................................................................................................................ | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................TAGCACCATGTAAACAGTGCCG............................................................................................................................................................. | 22 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................................................................ATGTGAAATTGACCAAGACTG................................................................................................................................ | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................TAGCACCATGTAAACATCG................................................................................................................................................................ | 19 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................................................................TTATTTTGTTTTTGATCCC...................................................................... | 19 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................................GATGGTTGTTACTGTTTTCCTAGCAG.................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .......................................................................TAGCACCATGTAAACAGTCTGG............................................................................................................................................................. | 22 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................TAGCACCATGTAAACAGTGCCT............................................................................................................................................................. | 22 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................TAGCACCATGTAAACATTA................................................................................................................................................................ | 19 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................TAGCACCATGTAAACATAG................................................................................................................................................................ | 19 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................................................................................GACTGACTAGATAGGCCTTAACATTGTCC........................................................................................................ | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................GACCAAGACTGACTAGATAGGCCTTAAC............................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ....................................................................................................................AGACTGACTAGATAGGCCTTAACATTGT.......................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .......................................................................TAGCACCATGTAAACTTTG................................................................................................................................................................ | 19 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................................................................................................................TTTTGTTTTTGATGGTAGAG.................................................................. | 20 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................................................................................................AGAGGTTGGCCAGCTCCGC | 19 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................CAAGACTGACTAGATAGGCCTTAACATTGTCCA....................................................................................................... | 33 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................AGGCCTTAACATTGTC......................................................................................................... | 16 | 3 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.33 | - |
| ...........................................................................................................................................................AGAGGTTTATTTTGTTT.............................................................................. | 17 | 9 | 0.11 | 0.11 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.11 |
| AAGTTAATTGCCTGTGGTCACAAGACTAGTTTTTGTAATTTTAGGGTGAGGCACTCTAACATTATCTGTAATAGCACCATGTAAACAGTCATAGCCACTTGATGTGAAATTGACCAAGACTGACTAGATAGGCCTTAACATTGTCCAATTGTAGAAGAGGTTTATTTTGTTTTTGATGGTTGTTACTGTTTTCCTAGCAGATAAATCTGATCCTAAACCTGGGGTTATGACCCAAGAGGTTGGCCAGCTC .........................................................................((.......(((((((.(((((((((((.............))))...(((.(((((((((((.(((.........)))....))))))))))).))).....))))))).))))))).....)).................................................... ..................................................................67...................................................................................................................................200................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR189784 | SRR189782 | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR039615(GSM531978) Severe Chronic Hepatitis B Liver Tissue. (liver) | SRR029131(GSM416760) MCF7. (cell line) | SRR189786 | SRR039622(GSM531985) HCV(+) Adjacent Tissue Sample. (liver) | DRR001485(DRX001039) "Hela long total cell fraction, LNA(+)". (hela) | SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver) | DRR001487(DRX001041) "Hela long nuclear cell fraction, LNA(+)". (hela) | SRR029054(GSM402329) MCF7_smallRNAseq. (cell line) | SRR330873(SRX091711) tissue: skin psoriatic involveddisease state:. (skin) | SRR037935(GSM510473) 293cand3. (cell line) | SRR330914(SRX091752) tissue: normal skindisease state: normal. (skin) | SRR553572(SRX182778) source: Frontal Cortex. (Frontal Cortex) | SRR189787 | SRR330917(SRX091755) tissue: normal skindisease state: normal. (skin) | SRR330919(SRX091757) tissue: normal skindisease state: normal. (skin) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR342900(SRX096796) small RNA seq of Right atrial tissue. (heart) | SRR330915(SRX091753) tissue: normal skindisease state: normal. (skin) | GSM450599(GSM450599) miRNA sequencing raw reads from post-mortem s. (brain) | SRR330893(SRX091731) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR342896(SRX096792) small RNA seq of Right atrial tissue. (heart) | TAX577745(Rovira) total RNA. (breast) | SRR330878(SRX091716) tissue: skin psoriatic involveddisease state:. (skin) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) |
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