ID: uc004dnb.2_intron_1_0_chrX_49062274_r.5p
GENE: (46)
chrX:49062772-49063021-


(3)
BRAIN 		(2)
BREAST 		(11)
CELL-LINE 		(1)
CERVIX 		(1)
HELA 		(1)
LIVER 		(2)
OTHER

Sense strand
TCCCAGGCACCTATCATCGTGGGCGAAATTCAGGGCCCAATAGGGCTCAGGTGAGGCTGTGGAGGTGGTGCTGGGGTCTGGGGTCTGGAGAGATGGGGGCAGCCTAGGCTGAATTTCTCAAACACAGCACATATCAGGCCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGAGTTTTGCTCTGCTGCCCAGGCTGGAGTACAGTGTTGAGATCTTGGCTCACTGTAACCCCTGCCTCCCGGGTCC
........................................................................................................................................((((...................((((......))))(((((.....))))).......))))...................................................
.....................................................................................................................................134...............................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR324841(SRX087285)
"Total RNA, no rRNA depletion". (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR189787DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR390725(GSM850204)
small rna immunoprecipitated. (cell line)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR040017(GSM532902)
G645T. (cervix)		SRR343335GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577744(Rovira)
total RNA. (breast)		TAX577738(Rovira)
total RNA. (breast)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTCCAG..................................................................................3049.000.0022.0020.00-2.00-5.00-----------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTCCAG......................................................................................2629.000.0013.0013.00-1.00-2.00-----------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTTAAAT...............................................................................3325.000.008.0010.00-2.00-5.00-----------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTTAAAA...............................................................................3318.000.0010.003.00-4.00-1.00-----------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTCCCG..................................................................................3017.000.008.006.00-3.00-------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTCCG..................................................................................3015.000.003.008.00-3.00-1.00-----------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTCCG.................................................................................3113.000.007.005.00-1.00-------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTCCCG....................................................................................288.000.002.005.00-1.00-------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTCCAT...................................................................................297.000.004.002.00-1.00-------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTTCCG................................................................................327.000.005.002.00---------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTTTCAG...............................................................................337.000.004.00--1.002.00------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTTCCAG...............................................................................337.000.004.002.00-1.00-------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTTAT.................................................................................316.000.002.003.00-----1.00---------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTCCCG...................................................................................296.000.004.002.00---------------------
...........................................................................................................................................CCTTTTTTTTTTTTTTTTTTTTTTTTTTTTCG...............................................................................326.000.002.002.00-1.00-1.00-----------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTTTCCG...............................................................................335.000.002.001.00-2.00-------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTTAAAC...............................................................................335.000.001.003.00-1.00-------------------
...........................................................................................................................................CCTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCGG.............................................................................345.000.00-4.00-1.00-------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTTATTG...............................................................................335.000.002.001.00-1.00-1.00-----------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTCAT..................................................................................305.000.004.00--1.00-------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTCCAT.................................................................................315.000.003.001.00-1.00-------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTCCTG....................................................................................284.000.001.003.00---------------------
...........................................................................................................................................CCTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCG..............................................................................334.000.001.002.00---1.00-----------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTTTCCAG..............................................................................344.000.002.002.00---------------------
...........................................................................................................................................CCTTTTTTTTTTTTTTTTTTTTTTTTTTTTCAAG.............................................................................344.000.001.001.00-2.00-------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTATT..............................................................................344.000.002.001.00---1.00-----------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTCC...............................................................................334.000.00-4.00---------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTCCCC......................................................................................264.000.00-1.00--3.00------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTG..............................................................................344.000.001.003.00---------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTTCAT................................................................................324.000.001.002.00-1.00-------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTCCCG.................................................................................314.000.003.00--1.00-------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAT.............................................................................354.000.00-1.00-1.00-2.00-----------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTCCCG................................................................................324.000.002.002.00---------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTCCAT.....................................................................................274.000.001.003.00---------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTTAATT...............................................................................334.000.002.002.00---------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTTCTTT...............................................................................333.000.001.001.00---1.00-----------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTCCAT....................................................................................283.000.001.002.00---------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTTCCT................................................................................323.000.002.00----1.00-----------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTCCCG.....................................................................................273.000.00-2.00-1.00-------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTTATTT...............................................................................333.000.001.002.00---------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTTAAGT...............................................................................333.000.003.00----------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCC..............................................................................343.000.00-2.00---1.00-----------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTCCG.......................................................................................253.000.002.00--1.00-------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTCCCC..................................................................................303.000.00-2.00--1.00------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTCAAG..................................................................................303.000.00-1.00-2.00-------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTCG....................................................................................283.000.001.001.00---1.00-----------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTCAAG...................................................................................293.000.00-1.00-1.00-1.00-----------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTCAAG.................................................................................313.000.00-2.00-----1.00---------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTCAAT...................................................................................293.000.001.002.00---------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTCTTG....................................................................................282.000.00-1.00---1.00-----------------
.........................................................................................................................................GCCCTTTTTTTTTTTTTTTTTTTTCGG......................................................................................272.000.00----2.00------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTTCCTT...............................................................................332.000.00---2.00-------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCAG.............................................................................352.000.001.001.00---------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTCAT....................................................................................282.000.001.00--1.00-------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTCTTG..................................................................................302.000.00---1.00-1.00-----------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTCGG..................................................................................302.000.001.001.00---------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTCCCT.................................................................................312.000.001.00----1.00-----------------
...........................................................................................................................................CCTTTTTTTTTTTTTTTTTTTTTTTTTTTTCACG.............................................................................342.000.001.001.00---------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTCCCC................................................................................322.000.001.001.00---------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTTACTG...............................................................................332.000.00-1.00---1.00-----------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTTATAG...............................................................................332.000.00-----2.00-----------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTCAA....................................................................................282.000.00-1.00-1.00-------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCTG.............................................................................352.000.001.00----1.00-----------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTTCTCT...............................................................................332.000.00---1.00-1.00-----------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTCCCT...................................................................................292.000.00---2.00-------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTTACTT...............................................................................332.000.00-1.00-1.00-------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTCTAG.....................................................................................272.000.00-1.00-1.00-------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTTATA................................................................................322.000.001.001.00---------------------
..............................................................................................................................................................................AGAGTTTTGCTCTGCTGCCAAGG.....................................................232.000.00------2.00----------------
.......................................................................................................................................AGGCCCTTTTTTTTTTTTTTTTTTTTC........................................................................................272.000.00----2.00------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTTTCAA...............................................................................332.000.00-1.00-1.00-------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTTATT................................................................................322.000.002.00----------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTCCAA..................................................................................302.000.002.00----------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAA.............................................................................352.000.00-1.00-1.00-------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTCTCC....................................................................................282.000.001.00---1.00------------------
...........................................................................................................................................CCTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCCT.............................................................................342.000.001.00----1.00-----------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTCCAT......................................................................................262.000.00-1.00---1.00-----------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTCAAT................................................................................322.000.001.001.00---------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTTTCAT...............................................................................332.000.002.00----------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTCCC...................................................................................292.000.001.00------1.00---------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTCAAG....................................................................................282.000.001.00--1.00-------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTAT...............................................................................332.000.00-1.00-1.00-------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTCAT.....................................................................................272.000.00---1.00-1.00-----------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTCCC......................................................................................262.000.001.00----1.00-----------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTCTAG....................................................................................282.000.001.001.00---------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTTATG................................................................................322.000.001.001.00---------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTCCTT...................................................................................292.000.001.001.00---------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTCCTC..................................................................................302.000.001.00---1.00------------------
................................................................................................................................................................................................CCAGGCTGGAGTACAGTGTAGGG...................................231.000.00------------1.00----------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTCCTT................................................................................321.000.001.00----------------------
..................................................................................................................................................................................TTTTGCTCTGCTGCCCAGGCTGGAGGC.............................................271.000.00------1.00----------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTTATTC...............................................................................331.000.00-----1.00-----------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTACAG.............................................................................351.000.00-1.00---------------------
.....................................................................................................................................TCAGGCCCTTTTTTTTTTTTTTTTTTTTGGG......................................................................................311.000.00----1.00------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTCCCA....................................................................................281.000.001.00----------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCT..............................................................................341.000.001.00----------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTCGT...................................................................................291.000.00---1.00-------------------
........................................................................................................................................................................................TCTGCTGCCCAGGCTGGAGTACAGCGG.......................................271.000.00----1.00------------------
..................................................................................................................................................................................TTTTGCTCTGCTGCCCAGGCTGGAGCG.............................................271.000.00----1.00------------------
.......................................................................................................................................AGGCCCTTTTTTTTTTTTTTTTTTTTGGG......................................................................................291.000.00----1.00------------------
.......................................................................................................................................AGGCCCTTTTTTTTTTTCC................................................................................................191.000.00----1.00------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTTAACG...............................................................................331.000.00-1.00---------------------
.......................................................................................................................................AGGCCCTTTTTTTTTTTTTTGTTC...........................................................................................241.000.00----1.00------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTCCCT.....................................................................................271.000.001.00----------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCTT.............................................................................351.000.001.00----------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTCCGG....................................................................................281.000.00-1.00---------------------
.........................................................................................................................................GCCCTTTTTTTTTTTTTAACC............................................................................................211.000.00------1.00----------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTCTAG......................................................................................261.000.00-1.00---------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTTTCTC...............................................................................331.000.00-----1.00-----------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTGAAG..................................................................................301.000.00-------1.00---------------
.............................TCAGGGCCCAATAGGGCTTTG........................................................................................................................................................................................................211.000.00---------1.00-------------
.................................................................................................................................................................................................CAGGCTGGAGTACAGTGTAGGG...................................221.000.00------------1.00----------
................................................................................................................................................................................AGTTTTGCTCTGCTGCCCAGGCAGG.................................................251.000.00----1.00------------------
...........................................................................................................................................CCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGACAAG...........................................................................361.000.00---1.00-------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTGTTT..................................................................................301.000.00-------1.00---------------
........................................................................................................................................GGCCCTTTTTTTTTTTTTTTCCTT..........................................................................................241.000.00----1.00------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTCGGC.....................................................................................271.000.00----1.00------------------
.....................................................................................................................................TCAGGCCCTTTTTTTTTTTTTTTTTTTGGGC......................................................................................311.000.00------1.00----------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTCTGG.....................................................................................271.000.00----1.00------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTCATG.................................................................................311.000.001.00----------------------
..........................................................................................................................................................................................TGCTGCCCAGGCTGGAGCGCC...........................................211.000.00------1.00----------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTTTCCTG..............................................................................341.000.001.00----------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTC.............................................................................351.000.00---1.00-------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTCTAC......................................................................................261.000.00-1.00---------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTTCCCG...............................................................................331.000.00-1.00---------------------
...........................................................................................................................................CCTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTC.............................................................................341.000.00-1.00---------------------
................................................................................................................................................................................AGTTTTGCTCTGCTGCCCAGGCTGGAGTACG...........................................311.000.00------1.00----------------
............................................................................................................................................CTTTTTTTTTTTTTTTTTTTTTTTTTTTTGATTTG...........................................................................351.000.00---1.00-------------------
.........................................................................................................................................GCCCTTTTTTTTTTTTTTTTTTTTCTG......................................................................................271.000.00-1.00---------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTCAC......................................................................................261.000.00-1.00---------------------
........................................................................................................................................................................................TCTGCTGCCCAGGCTGGAGCGCC...........................................231.000.00------1.00----------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTCTGC...................................................................................291.000.00----1.00------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTCTAT................................................................................321.000.00-1.00---------------------
.......................................................................................................................................AGGCCCTTTTTTTTTTTTCCTC.............................................................................................221.000.00----1.00------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCAC.............................................................................351.000.00---1.00-------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTCAGT................................................................................321.000.00----1.00------------------
.............................................................................................................................................................................................TGCCCAGGCTGGAGTACAGGCG.......................................221.000.00----1.00------------------
...........................................................................................................................................CCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGATTAT...........................................................................361.000.001.00----------------------
.......................................................................................................................................AGGCCCTTTTTTTTTTTTTTTTTTTTTTC......................................................................................291.000.00------1.00----------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTCTAG................................................................................321.000.001.00----------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTTTCATG..............................................................................341.000.00-1.00---------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTCTCG.....................................................................................271.000.001.00----------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTCTC....................................................................................281.000.00------1.00----------------
.........................................................................................................................................GCCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTACG..............................................................................351.000.00---1.00-------------------
.....................................................................................................................................................................................TGCTCTGCTGCCCAGGCTGGGGTC.............................................241.000.00----1.00------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTCACG...................................................................................291.000.00-------1.00---------------
........................................................................................................................................................TTTTTTTTTTTTTTTTTGAGACAGAGTTTTTTT.................................................................331.000.00----1.00------------------
.......................................................................................................................................AGGCCCTTTTTTTTTTTTTTTTTTATTT.......................................................................................281.000.00----1.00------------------
..........................................................................................................................................................................................................................TTGGCTCACTGTAACCCCTGCCTCCCCGGC..301.000.00----1.00------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTCAAG................................................................................321.000.00---1.00-------------------
...................................................................................................................................................................................TTTGCTCTGCTGCCCAGGCTGGAGCGC............................................271.000.00----1.00------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTTTCTCT..............................................................................341.000.00-----1.00-----------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTCTCG....................................................................................281.000.00---1.00-------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGTG.............................................................................351.000.00-----1.00-----------------
...........................................................................................................................................CCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGATT.............................................................................341.000.00---1.00-------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTTTCCTT..............................................................................341.000.00-----1.00-----------------
..........................................................................................................................................................................................TGCTGCCCAGGCTGGAGTACACCAG.......................................251.000.00------1.00----------------
.........................................................................................................................................GCCCTTTTTTTTTTTTTTTTTTTTTTTAGTC..................................................................................311.000.001.00----------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTTACG................................................................................321.000.00-----1.00-----------------
................................................................................................................................................................................AGTTTTGCTCTGCTGCCCAGGCTGGAGCGC............................................301.000.00----1.00------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTCTTC.................................................................................311.000.00------1.00----------------
.......................................................................................................................................AGGCCCTTTTTTTTTTGGAG...............................................................................................201.000.00------1.00----------------
....................................................................................................................................................................................TTGCTCTGCTGCCCAGGCTGGATTTT............................................261.000.00----1.00------------------
.......................................................................................................................................AGGCCCTTTTTTTTTTTTTTTTTTTTTTTGC....................................................................................311.000.00------1.00----------------
...........................................................................................................................................CCTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCGT.............................................................................341.000.00-----1.00-----------------
..........................................................................................................................................................................................TGCTGCCCAGGCTGGAGTACAGTGTGAT....................................281.000.00----1.00------------------
..................................................................................................................................................................................TTTTGCTCTGCTGCCCAGGCTGGAGGG.............................................271.000.00------1.00----------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTCCAC.....................................................................................271.000.00-1.00---------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTGCGG..................................................................................301.000.00----1.00------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGG.............................................................................351.000.00---1.00-------------------
.........................................................................................................................................GCCCTTTTTTTTTTTTTTTGTGG..........................................................................................231.000.00------1.00----------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTCACT..................................................................................301.000.001.00----------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTCCCT......................................................................................261.000.00-1.00---------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTTACAC...............................................................................331.000.001.00----------------------
......................................................................................................................................................................................GCTCTGCTGCCCAGGCTGGAGAGAG...........................................251.000.00------1.00----------------
.........................................................................................................................................................................................CTGCTGCCCAGGCTGGAGTACAGCGGC......................................271.000.00----1.00------------------
......................................................................................................................................................................................................................................AACCCCTGCCTCCCGGGTCCGGGT241.000.00----1.00------------------
.......................................................................................................................................AGGCCCTTTTTTTTTTTTTTTTTTTTTTCCC....................................................................................311.000.00----1.00------------------
.....................................................AGGCTGTGGAGGTGGTA....................................................................................................................................................................................171.000.00------------------1.00----
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTCCTC...................................................................................291.000.00----1.00------------------
........................................................................................................................................GGCCCTTTTTTTTTTTTGG...............................................................................................191.000.00-------------1.00---------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTCCAC....................................................................................281.000.001.00----------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTCCTG.................................................................................311.000.001.00----------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTCAT.................................................................................311.000.00-1.00---------------------
...........................................................................................................................................CCTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTC..............................................................................331.000.001.00----------------------
................................................................................................................................................................................................................................CACTGTAACCCCTGCCTTAGA.....211.000.00--------------1.00--------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTCTAG...................................................................................291.000.001.00----------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTTTCCGG..............................................................................341.000.00-----1.00-----------------
................................................AGGTGAGGCTGTGGAGGTGGCAGC..................................................................................................................................................................................241.000.00----1.00------------------
........................................................................................................................................GGCCCTTTTTTTTTTTTTTTTTTTTTTTTCTCT.................................................................................331.000.00----1.00------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTCGA......................................................................................261.000.001.00----------------------
.....................................................AGGCTGTGGAGGTGGGCT...................................................................................................................................................................................181.000.00---------------------1.00-
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTCGAG...................................................................................291.000.00----1.00------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTCCAA...................................................................................291.000.001.00----------------------
...................................................................................................................................................................................TTTGCTCTGCTGCCCAGGCTGGAGG..............................................251.000.00------1.00----------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTCCAA.................................................................................311.000.00-1.00---------------------
........................................................................................................................................................................................................................TCTTGGCTCACTGTAACCCCGA............221.000.00---------1.00-------------
...........................................................................................................................................CCTTTTTTTTTTTTTTTTTTTTTTTTTTTTCATG.............................................................................341.000.00-1.00---------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTCATG.....................................................................................271.000.001.00----------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAA..............................................................................341.000.00-1.00---------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTG.............................................................................351.000.00---1.00-------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTCG...............................................................................331.000.00-1.00---------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGT.............................................................................351.000.001.00----------------------
...............................................................GGTGGTGCTGGGGTCCCT.........................................................................................................................................................................181.000.00-------------------1.00---
...........................................................................................................................................CCTTTTTTTTTTTTTTTTTTTTTTTTTTTTCGA..............................................................................331.000.00-1.00---------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTTCCGG...............................................................................331.000.001.00----------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTCAAA...................................................................................291.000.00-1.00---------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTTAGAG...............................................................................331.000.00-------1.00---------------
...........................................................................................................................................................................................................................TGGCTCACTGTAACCCCTGCCTCCGGGG...281.000.00----1.00------------------
..................................................................................................................................................................................TTTTGCTCTGCTGCCCAGGCTGGAGCGC............................................281.000.00----1.00------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTACC..............................................................................341.000.00-1.00---------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTTCCAC...............................................................................331.000.001.00----------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTCCCA...................................................................................291.000.00-1.00---------------------
.........................................................................................................................................GCCCTTTTTTTTTTTTTTTTCTTG.........................................................................................241.000.00-------1.00---------------
.......................................................................................................................................AGGCCCTTTTTTTTTTTTTTTATTG..........................................................................................251.000.00----1.00------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTCTC.................................................................................311.000.001.00----------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTCGG..............................................................................341.000.00-1.00---------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTT.............................................................................351.000.00-1.00---------------------
.........................................................................................................................................GCCCTTTTTTTTTTTTTTTTTTTTTCGG.....................................................................................281.000.00----1.00------------------
................................................AGGTGAGGCTGTGGAGGGTC......................................................................................................................................................................................201.000.00---------------1.00-------
.......................................................................................................................................AGGCCCTTTTTTTTTTTTTTTTTAG..........................................................................................251.000.00----1.00------------------
...........................................................................................................................................CCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGACCGA...........................................................................361.000.00-1.00---------------------
.......................................................................................................................................AGGCCCTTTTTTTTTTTTTTAAAC...........................................................................................241.000.00------1.00----------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTTATGG...............................................................................331.000.001.00----------------------
.........................................................................................................................................GCCCTTTTTTTTTTTTTTTTTGGC.........................................................................................241.000.00----1.00------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTCCGT....................................................................................281.000.001.00----------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTCAT..............................................................................341.000.00-----1.00-----------------
..........................................................................................................................................................................................TGCTGCCCAGGCTGGAGCGG............................................201.000.00------1.00----------------
.........................................................................................................................................GCCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTAT...............................................................................341.000.001.00----------------------
.......................................................................................................................................AGGCCCTTTTTTTTTTTTTTTTTTTTGG.......................................................................................281.000.00----1.00------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTCAAA.................................................................................311.000.00-1.00---------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTTAACA...............................................................................331.000.00-----1.00-----------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTTCG.................................................................................311.000.001.00----------------------
.......................................................................................................................................AGGCCCTTTTTTTTTTTTAG...............................................................................................201.000.00----1.00------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTCCCC.....................................................................................271.000.001.00----------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTTGTT................................................................................321.000.00----1.00------------------
.......................................................................................................................................AGGCCCTTTTTTTTTTTTTTTTTTTGG........................................................................................271.000.00----1.00------------------
...........................................................................................................................................CCTTTTTTTTTTTTTTTTTTTTTTTTTTTTCAGT.............................................................................341.000.001.00----------------------
......................................................................................................................................................................TTTGAGACAGAGTTTTGCTCCGCC............................................................241.000.00----1.00------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTCACG.................................................................................311.000.00-1.00---------------------
..............................................................................................................................................TTTTTTTTTTTTTTTTTTTTTTTTTTTGAGCTTT..........................................................................341.000.00-------1.00---------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTCGGC...................................................................................291.000.00----1.00------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTCGG......................................................................................261.000.00-----1.00-----------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTCAAA......................................................................................261.000.00-----------------1.00-----
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTCTAG..................................................................................301.000.00-1.00---------------------
...............................................................................................................................................................................................CCCAGGCTGGAGTACAGTGTGCG....................................231.000.00----1.00------------------
...........................................................................................................................................CCTTTTTTTTTTTTTTTTTTTTTTTTTTTTCAC..............................................................................331.000.00-1.00---------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTCTAT......................................................................................261.000.001.00----------------------
.....................................................................................................................................................TTTTTTTTTTTTTTTTTTTTGAGACAGAGGGAG....................................................................331.000.00----1.00------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTCTAC...................................................................................291.000.001.00----------------------
........................................................................................................................................GGCCCTTTTTTTTTTTTTTTTTATTT........................................................................................261.000.00------1.00----------------
...........................................................................................................................................CCTTTTTTTTTTTTTTTTTTTTTTTTTTTTCGT..............................................................................331.000.001.00----------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTCCAC.................................................................................311.000.00-------1.00---------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTC..............................................................................341.000.001.00----------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTCTTA...................................................................................291.000.00---1.00-------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTCTTG................................................................................321.000.00-----1.00-----------------
...........................................................................................................................................CCTTTTTTTTTTTTTTTTTTTTTTTTTTTTCGG..............................................................................331.000.001.00----------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTCACG....................................................................................281.000.00---1.00-------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTTAGT................................................................................321.000.00-------1.00---------------
......................................................................................................................CAAACACAGCACATATC...................................................................................................................1730.330.33-------0.33---------------
............................................................................................................................................................................ACAGAGTTTTGCTCTGCTGCCCAGGCTGG.................................................2960.170.17----0.17------------------
..........................................................................................................................................................................AGACAGAGTTTTGCTCTGCTGCCCAGGCTGG.................................................3160.170.17------0.17----------------
............................................................................................................................................................................ACAGAGTTTTGCTCTGCTGCCCAGGC....................................................2670.140.14----0.14------------------
..............................................................................................................................................................................AGAGTTTTGCTCTGCTGCCCAGGCTGGAG...............................................2990.110.11------0.11----------------

Antisense strand
TCCCAGGCACCTATCATCGTGGGCGAAATTCAGGGCCCAATAGGGCTCAGGTGAGGCTGTGGAGGTGGTGCTGGGGTCTGGGGTCTGGAGAGATGGGGGCAGCCTAGGCTGAATTTCTCAAACACAGCACATATCAGGCCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGAGTTTTGCTCTGCTGCCCAGGCTGGAGTACAGTGTTGAGATCTTGGCTCACTGTAACCCCTGCCTCCCGGGTCC
........................................................................................................................................((((...................((((......))))(((((.....))))).......))))...................................................
.....................................................................................................................................134...............................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR324841(SRX087285)
"Total RNA, no rRNA depletion". (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR189787DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR390725(GSM850204)
small rna immunoprecipitated. (cell line)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR040017(GSM532902)
G645T. (cervix)		SRR343335GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577744(Rovira)
total RNA. (breast)		TAX577738(Rovira)
total RNA. (breast)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTTGTTT............................................................................... 3329.000.00--29.00--------------------
.........................................................................................................................................GCCCTTTTTTTTTTTTTTTTTTTTTTTTTGGCC................................................................................ 3312.000.00--12.00--------------------
.........................................................................................................................................GCCCTTTTTTTTTTTTTTTTTTTTTTTTTGGTT................................................................................ 3311.000.00--11.00--------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTTGGCT............................................................................... 337.000.00--7.00--------------------
.........................................................................................................................................GCCCTTTTTTTTTTTTTTTTTTTTTTTTTGGCT................................................................................ 336.000.00--6.00--------------------
.........................................................................................................................................GCCCTTTTTTTTTTTTTTTTTTTTTTTTGTTT................................................................................. 323.000.00--3.00--------------------
.........................................................................................................................................GCCCTTTTTTTTTTTTTTTTTTTTTTTTGTCC................................................................................. 323.000.00--3.00--------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTTGCTT............................................................................... 333.000.00--3.00--------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTTGATT............................................................................... 333.000.00--1.00-----2.00--------------
.........................................................................................................................................GCCCTTTTTTTTTTTTTTTTTTTTTTTTGGTT................................................................................. 323.000.00--3.00--------------------
.........................................................................................................................................GCCCTTTTTTTTTTTTTTTTTTTTTTTTTGTG................................................................................. 323.000.00--3.00--------------------
.........................................................................................................................................GCCCTTTTTTTTTTTTTTTTTTTTTTTTGTGT................................................................................. 322.000.00--2.00--------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTTGACC............................................................................... 332.000.00--------2.00--------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTTGTTA............................................................................... 332.000.00--2.00--------------------
.........................................................................................................................................GCCCTTTTTTTTTTTTTTTTTTTTTTTTTTGGC................................................................................ 332.000.00--2.00--------------------
.........................................................................................................................................GCCCTTTTTTTTTTTTTTTTTTTTTTTTTTGGT................................................................................ 332.000.00--2.00--------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTTTGAC............................................................................... 332.000.00--------2.00--------------
.........................................................................................................................................GCCCTTTTTTTTTTTTTTTTTTTTTTTTTGCTT................................................................................ 332.000.00--2.00--------------------
.........................................................................................................................................GCCCTTTTTTTTTTTTTTTTTTTTTTTTTGTT................................................................................. 322.000.00--2.00--------------------
.........................................................................................................................................GCCCTTTTTTTTTTTTTTTTTTTTTTTTTGGAC................................................................................ 332.000.00--2.00--------------------
.........................................................................................................................................GCCCTTTTTTTTTTTTTTTTTTTTTTTTGTG.................................................................................. 312.000.00--2.00--------------------
..........................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAGGG.................................................................................. 3001.001.00----------1.00------------
.........................................................................................................................................GCCCTTTTTTTTTTTTTTTTTTTTTTTTGACT................................................................................. 321.000.00--1.00--------------------
.........................................................................................................................................GCCCTTTTTTTTTTTTTTTTTTTTTTGATG................................................................................... 301.000.00--1.00--------------------
.........................................................................................................................................GCCCTTTTTTTTTTTTTTTTTTTTTTTTGGCG................................................................................. 321.000.00--1.00--------------------
.........................................................................................................................................GCCCTTTTTTTTTTTTTTTTTTTTTTTGATT.................................................................................. 311.000.00--1.00--------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTTGAAC............................................................................... 331.000.00--1.00--------------------
.........................................................................................................................................GCCCTTTTTTTTTTTTTTTTTTTTTTTTTGGA................................................................................. 321.000.00--1.00--------------------
.........................................................................................................................................GCCCTTTTTTTTTTTTTTTTTTTTTTTTTGAAG................................................................................ 331.000.00--1.00--------------------
.........................................................................................................................................................................................CTGCTGCCCAGGCTGGAGTACAGTCGAG..................................... 281.000.00----1.00------------------
.........................................................................................................................................GCCCTTTTTTTTTTTTTTTTTTTTTTTTGCAT................................................................................. 321.000.00--1.00--------------------
........................................................................................................................................GGCCCTTTTTTTTTTTTTTTTTTTTTTCCTT................................................................................... 311.000.00-----------1.00-----------
.........................................................................................................................................GCCCTTTTTTTTTTTTTTTTTTTTTTTGAGC.................................................................................. 311.000.00--1.00--------------------
.......................................................................................................................................................................................................................ATCTTGGCTCACTGTAAG................. 181.000.00----------1.00------------
......................................................................................................................................................................................................................................AACCCCTGCCTCCCGGGTGAAA 221.000.00----------------1.00------
.........................................................................................................................................GCCCTTTTTTTTTTTTTTTTTTTTTTTTGTT.................................................................................. 311.000.00--1.00--------------------
.........................................................................................................................................GCCCTTTTTTTTTTTTTTTTTTTTTTTTTGGTG................................................................................ 331.000.00--1.00--------------------
.........................................................................................................................................GCCCTTTTTTTTTTTTTTTTTTTTTTTGGT................................................................................... 301.000.00--1.00--------------------
.........................................................................................................................................GCCCTTTTTTTTTTTTTTTTTTTTTTGTTG................................................................................... 301.000.00--1.00--------------------
.........................................................................................................................................GCCCTTTTTTTTTTTTTTTTTTTTTTTTTGCCT................................................................................ 331.000.00--1.00--------------------
............................................................................TCTGGGGTCTGGAGATC............................................................................................................................................................. 171.000.00--------------------1.00--
.........................................................................................................................................GCCCTTTTTTTTTTTTTTTTTTTTTTTTGGT.................................................................................. 311.000.00--1.00--------------------
.........................................................................................................................................GCCCTTTTTTTTTTTTTTTTTTTTTTTTTGGGA................................................................................ 331.000.00--1.00--------------------
.........................................................................................................................................GCCCTTTTTTTTTTTTTTTTTTTTTTTGGCA.................................................................................. 311.000.00-----------1.00-----------
.........................................................................................................................................GCCCTTTTTTTTTTTTTTTTTTTTTTTTTTGCT................................................................................ 331.000.00--1.00--------------------
..........................................................................................................................................CCCTTTTTTTTTTTTTTTTTTTTTTTTTTGGAC............................................................................... 331.000.00--------1.00--------------
...................................................................................................................ATGTGCTGTGTTTGAGA...................................................................................................................... 1730.330.33----------------------0.33
.......................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAGGGCCT.................................................................................. 3390.110.11--0.11--------------------