ID: uc004dmz.1_intron_0_0_chrX_49045736_r.3p
GENE: SYP(6)
chrX:49045686-49045935-


(1)
AGO2.ip 		(11)
B-CELL 		(8)
BRAIN 		(57)
BREAST 		(32)
CELL-LINE 		(5)
CERVIX 		(1)
FIBROBLAST 		(6)
HEART 		(1)
HELA 		(1)
KIDNEY 		(2)
OTHER 		(1)
RRP40.ip 		(10)
SKIN

Sense strand
GAGACTGTAATCTCTTTGGTACCTAACCCAGTGGGGGCAAGGTCAGGTATATCTTCTCAGCAGAGGCAGCTGGGATGAAGCTGGCTCCAGGAAAGAAGAAAAGACATAAAGCCAGGACAAAGGCATAACAGCCCAACCCCTATCTGAGGGCGCCACCCATGTCAGACCCCCTCTCCTTTCTGTGTCTTTTGTCTCTACAGGTCAGTGAAGCCCAGGAGGACCTGGGGGGGGCAAGAGCTCAGGAGAAGGC
..............................................................................................................................................((((((((.....)))...)))))....................................................................................
..................................................................................................................................131................................................182..................................................................
SizePerfect hitTotal NormPerfect NormSRR029125(GSM416754)
U2OS. (cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR029132(GSM416761)
MB-MDA231. (cell line)		SRR029129(GSM416758)
SW480. (cell line)		SRR037931(GSM510469)
293GFP. (cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR029127(GSM416756)
A549. (cell line)		SRR037935(GSM510473)
293cand3. (cell line)		SRR029131(GSM416760)
MCF7. (cell line)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR029124(GSM416753)
HeLa. (hela)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR029126(GSM416755)
143B. (cell line)		SRR189784SRR189782GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM416733(GSM416733)
HEK293. (cell line)		SRR029128(GSM416757)
H520. (cell line)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR015361(GSM380326)
Memory B cells (MM55). (B cell)		SRR191629(GSM715739)
5genomic small RNA (size selected RNA from to. (breast)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR191588(GSM715698)
52genomic small RNA (size selected RNA from t. (breast)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR444062(SRX128910)
Sample 27_3cDNABarcode: AF-PP-343: ACG CTC TT. (skin)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191491(GSM715601)
150genomic small RNA (size selected RNA from . (breast)		SRR191408(GSM715518)
88genomic small RNA (size selected RNA from t. (breast)		SRR038859(GSM458542)
MM386. (cell line)		SRR191414(GSM715524)
31genomic small RNA (size selected RNA from t. (breast)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR191405(GSM715515)
55genomic small RNA (size selected RNA from t. (breast)		SRR037932(GSM510470)
293cand4_rep1. (cell line)		SRR444047(SRX128895)
Sample 27_1cDNABarcode: AF-PP-343: ACG CTC TT. (skin)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		TAX577579(Rovira)
total RNA. (breast)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR191410(GSM715520)
20genomic small RNA (size selected RNA from t. (breast)		SRR040034(GSM532919)
G001N. (cervix)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR037936(GSM510474)
293cand1. (cell line)		TAX577580(Rovira)
total RNA. (breast)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR189785SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR191439(GSM715549)
176genomic small RNA (size selected RNA from . (breast)		SRR191623(GSM715733)
18genomic small RNA (size selected RNA from t. (breast)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR191444(GSM715554)
109genomic small RNA (size selected RNA from . (breast)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR191614(GSM715724)
92genomic small RNA (size selected RNA from t. (breast)		SRR191628(GSM715738)
52genomic small RNA (size selected RNA from t. (breast)		SRR191587(GSM715697)
50genomic small RNA (size selected RNA from t. (breast)		SRR191500(GSM715610)
7genomic small RNA (size selected RNA from to. (breast)		SRR191475(GSM715585)
18genomic small RNA (size selected RNA from t. (breast)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191418(GSM715528)
40genomic small RNA (size selected RNA from t. (breast)		SRR191416(GSM715526)
34genomic small RNA (size selected RNA from t. (breast)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191627(GSM715737)
45genomic small RNA (size selected RNA from t. (breast)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR038860(GSM458543)
MM426. (cell line)		TAX577744(Rovira)
total RNA. (breast)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		TAX577453(Rovira)
total RNA. (breast)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191610(GSM715720)
195genomic small RNA (size selected RNA from . (breast)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191412(GSM715522)
24genomic small RNA (size selected RNA from t. (breast)		SRR191420(GSM715530)
122genomic small RNA (size selected RNA from . (breast)		GSM532877(GSM532877)
G691N. (cervix)		SRR191485(GSM715595)
123genomic small RNA (size selected RNA from . (breast)		TAX577588(Rovira)
total RNA. (breast)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191447(GSM715557)
142genomic small RNA (size selected RNA from . (breast)		SRR191633(GSM715743)
85genomic small RNA (size selected RNA from t. (breast)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)		SRR191612(GSM715722)
65genomic small RNA (size selected RNA from t. (breast)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR191434(GSM715544)
171genomic small RNA (size selected RNA from . (breast)		SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR191459(GSM715569)
32genomic small RNA (size selected RNA from t. (breast)		SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)		TAX577740(Rovira)
total RNA. (breast)		SRR191621(GSM715731)
16genomic small RNA (size selected RNA from t. (breast)		SRR038855(GSM458538)
D10. (cell line)		SRR191626(GSM715736)
36genomic small RNA (size selected RNA from t. (breast)		SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)		SRR191433(GSM715543)
170genomic small RNA (size selected RNA from . (breast)		SRR040007(GSM532892)
G601T. (cervix)		SRR191570(GSM715680)
56genomic small RNA (size selected RNA from t. (breast)		SRR191403(GSM715513)
44genomic small RNA (size selected RNA from t. (breast)		SRR191580(GSM715690)
103genomic small RNA (size selected RNA from . (breast)		TAX577741(Rovira)
total RNA. (breast)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR038861(GSM458544)
MM466. (cell line)		SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)		TAX577742(Rovira)
total RNA. (breast)		SRR191417(GSM715527)
39genomic small RNA (size selected RNA from t. (breast)		SRR191411(GSM715521)
21genomic small RNA (size selected RNA from t. (breast)		SRR040017(GSM532902)
G645T. (cervix)		SRR191624(GSM715734)
31genomic small RNA (size selected RNA from t. (breast)		SRR191502(GSM715612)
9genomic small RNA (size selected RNA from to. (breast)		SRR191474(GSM715584)
16genomic small RNA (size selected RNA from t. (breast)		SRR038857(GSM458540)
D20. (cell line)		SRR191461(GSM715571)
35genomic small RNA (size selected RNA from t. (breast)		SRR191438(GSM715548)
175genomic small RNA (size selected RNA from . (breast)		SRR191619(GSM715729)
166genomic small RNA (size selected RNA from . (breast)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR038863(GSM458546)
MM603. (cell line)		SRR191445(GSM715555)
110genomic small RNA (size selected RNA from . (breast)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		SRR191458(GSM715568)
28genomic small RNA (size selected RNA from t. (breast)		SRR191473(GSM715583)
121genomic small RNA (size selected RNA from . (breast)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040027(GSM532912)
G220T. (cervix)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
.......................................................................................................................................ACCCCTATCTGAGGGGGAA................................................................................................19363.001.0010.679.339.002.0011.33-3.336.330.67-0.670.33--0.33--0.332.000.33---2.332.00-----------0.33-0.67--------0.67---------------------------------------0.33-------------------------------------------------
.......................................................................................................................................ACCCCTATCTGAGGGGAAA................................................................................................19360.331.0015.674.3311.679.006.00-6.672.331.00-----1.00---0.330.67---0.33-0.67---------------------0.33-------------------------0.33---------------------------------------------------------------
.......................................................................................................................................ACCCCTATCTGAGGGGAA.................................................................................................18340.331.009.008.001.004.004.67-1.001.670.33-0.67------1.330.67----0.33-0.670.670.33----0.33--0.33-----0.330.33-------0.33-------0.33-----0.33-0.67-0.330.33---------------0.33-----0.33--------------------0.33----0.33---0.33------0.33---0.33----
.......................................................................................................................................ACCCCTATCTGAGGGGGA.................................................................................................18330.001.000.671.330.33-2.33-1.001.67-2.672.00--0.330.33--1.000.33---2.33---0.67---0.331.00--1.33--0.67------0.33-----0.33---0.67-0.67--0.33---0.33---0.33--0.330.33----0.670.33----------0.33-0.33----0.33--0.33----0.330.330.330.33--0.33----0.330.33---0.330.33--0.330.33------------
.......................................................................................................................................ACCCCTATCTGAGGGGGGA................................................................................................19327.331.000.334.670.330.330.677.67-0.33-0.670.670.33-1.33---0.330.33-0.67-1.33-0.671.00-----0.330.67--0.33-0.330.33---------------0.33-------------0.33-----0.33--0.33--------------0.330.33-------0.33---------0.33----0.33-----0.33----0.33---------
.......................................................................................................................................ACCCCTATCTGAGGGGACA................................................................................................19326.001.004.331.008.673.330.67-1.67-0.67--2.33--1.00---0.330.67-----------------------------------------------------0.33--------------------------0.33-0.33-----0.33----------------------------
.......................................................................................................................................ACCCCTATCTGAGGGGGAC................................................................................................19324.671.0010.67-2.336.67--0.67-2.33--0.67--1.00-------------------------------------------------------------------------------------------------------0.33------------------
.......................................................................................................................................ACCCCTATCTGAGGGGACC................................................................................................19322.001.005.67-1.333.000.67-1.33----2.33--1.00---0.331.00---0.330.33-0.330.330.33-----0.330.33----------------------0.33---0.33--0.67---------0.33----------0.33---------------------------------------0.33--0.330.33------
.......................................................................................................................................ACCCCTATCTGAGGGGAC.................................................................................................18317.001.005.33-1.002.67----1.000.330.330.33--0.33----0.33------0.67------0.33-0.67-0.33----0.33-0.33-----------0.33-----0.330.33-----------0.33------------------0.33----0.33----------0.33------------------------0.33-
.......................................................................................................................................ACCCCTATCTGAGGGGAAC................................................................................................19315.671.008.00-1.331.00----3.00--0.67--0.33----1.00-------0.33-------------------------------------------------------------------------------------------------------------
.......................................................................................................................................ACCCCTATCTGAGGGGA..................................................................................................17312.671.00---------5.672.67------0.67--------0.33----0.330.33-----------0.33-----0.33-------------0.33----0.33-0.33------0.67----------0.33-----------------------------------------------
.......................................................................................................................................ACCCCTATCTGAGGGAAA.................................................................................................1839.331.000.332.671.00---2.00-1.00--0.67----------------0.33----0.33------------------------0.33-------------------------------------0.33-------------------------------------0.33--
.......................................................................................................................................ACCCCTATCTGAGGGAAAA................................................................................................1936.671.00-1.331.670.33--2.33-0.33----------0.33---------------------------------------------------------------------------------------------------------0.33-----------
........................................................................................................................................CCCCTATCTGAGGGCGG.................................................................................................1714.001.00-----2.00-------1.00------1.00--------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................ACCCCTATCTGAGGGGTAC................................................................................................1934.001.001.00----2.33--0.33----------------------------------------------------------------------------------------0.33---------------------------------------
.........ATCTCTTTGGTACCTCC................................................................................................................................................................................................................................174.000.00------------4.00----------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................ACCCCTATCTGAGGGACA.................................................................................................1833.331.001.00--0.33----0.33--0.33--0.33-------------0.67---0.33--------------------------------------------------------------------------------------------------------
.......................................................................................................................................ACCCCTATCTGAGGGAA..................................................................................................1733.001.00-----------------------------1.67---------1.33-------------------------------------------------------------------------------------------------
......................................................................................................................................AACCCCTATCTGAGGGGA..................................................................................................183.000.00----------2.00------1.00-----------------------------------------------------------------------------------------------------------------------
........................................................................................................................................CCCCTATCTGAGGGCGAC................................................................................................1813.001.00-1.00-----------1.00-----------------------------------------1.00---------------------------------------------------------------------------------
........................................................................................................................................CCCCTATCTGAGGGCGC.................................................................................................1713.003.00-----1.00--------------2.00--------------------------------------------------------------------------------------------------------------------
........................................................................................................................................CCCCTATCTGAGGGCGGA................................................................................................1813.001.00---1.00-1.00-------1.00---------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................ACCCCTATCTGAGGGGTAA................................................................................................1932.331.000.331.67------------------------------------0.33--------------------------------------------------------------------------------------------------
......................................................................................................................................AACCCCTATCTGAGGGGGGA................................................................................................202.000.00---------1.001.00------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................CCCCTATCTGAGGGCGA.................................................................................................1712.001.00-----1.00-----------------------------------------------1.00-----------------------------------------------------------------------------------
.................................................................................................................................................................TCAGACCCCCTCTCCCG........................................................................172.000.00---------------2.00-------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................ACCCCTATCTGAGGGGTA.................................................................................................1831.671.00-----0.67-----------0.33----------------------------------------------------------------0.33------------------------0.33-----------------------------
..................................................................................................................................................................................................................CCCAGGAGGACCTGGGGG......................1821.501.50-----1.50-----------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................ACCCCTATCTGAGGGGCG.................................................................................................1831.331.00-----1.33-----------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................ACCCCTATCTGAGGGGGC.................................................................................................1831.331.00-----0.67--------------0.33----------------------------------------------0.33---------------------------------------------------------------------
..........................................................................ATGAAGCTGGCTCCAGGAAAGAAGAAAAGACAT...............................................................................................................................................3311.001.00------------1.00----------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................CCCCTATCTGAGGGCGCA................................................................................................1811.003.00-----------------------------------------1.00-----------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................AGTGAAGCCCAGGAGGAC.............................1811.001.00------------1.00----------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................AACCCCTATCTGAGGGGGAC................................................................................................201.000.00----------1.00------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................TGGGGGGGGCAAGAGCTCAGGAGAAGGACT301.000.00------------1.00----------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................CCCCTATCTGAGGGCG..................................................................................................1611.001.00----------------------------------------1.00------------------------------------------------------------------------------------------------
.......................................................................................................................................ACCCCTATCTGAGGGCAAA................................................................................................191.000.00-------1.00---------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................GCAAGAGCTCAGGAGAAGGCCTGT241.000.00----------------------------------------------1.00------------------------------------------------------------------------------------------
.......................................................................................................................................ACCCCTATCTGAGGGCGCCAAA.............................................................................................221.000.00------------------------------------1.00----------------------------------------------------------------------------------------------------
.......................................................................................................................................ACCCCTATCTGAGGGGGCG................................................................................................1931.001.00-----1.00-----------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................AACCCCTATCTGAGGGGACC................................................................................................201.000.00---------------------------------1.00-------------------------------------------------------------------------------------------------------
........................................................................................................................................CCCCTATCTGAGGGC...................................................................................................1521.001.00-------------0.50-----------------------------------------------0.50---------------------------------------------------------------------------
.......................................................................................................................................ACCCCTATCTGAGGGTACC................................................................................................1931.001.00------0.33-0.33--0.33-----------------------------------------------------------------------------------------------------------------------------
...........................................................................................AAAGAAGAAAAGACATAGGT...........................................................................................................................................201.000.00------------------------------------------------1.00----------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................GGGGGCAAGAGCTCAGGAGAAGG.2311.001.00------------------------------1.00----------------------------------------------------------------------------------------------------------
.......................................................................................................................................ACCCCTATCTGAGGG....................................................................................................1531.001.00-------------0.33-----------------------------------------------0.33-----------------------------------------------------------------------0.33---
...........................................................................................................................................CTATCTGAGGGCGCCACCCATGTCAG.....................................................................................2611.001.00-------------------------------------------1.00---------------------------------------------------------------------------------------------
........................................................................................................................................CCCCTATCTGAGGGCGAA................................................................................................1811.001.00-------------1.00---------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................ACCCCTATCTGAGGGTACA................................................................................................1931.001.00---0.33--0.33-------0.33--------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................CCTATCTGAGGGCGC.................................................................................................1511.001.00---------------------------------------------------------1.00-------------------------------------------------------------------------------
......................................................................................................................................AACCCCTATCTGAGGGGGGT................................................................................................201.000.00----------------------------------------------------1.00------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................GGGGCAAGAGCTCAGCTGG....191.000.00---------------------------------------------------1.00-------------------------------------------------------------------------------------
.........................................................................................................................................CCCTATCTGAGGGCGGCCA..............................................................................................191.000.00-1.00---------------------------------------------------------------------------------------------------------------------------------------
......................................................................................CCAGGAAAGAAGAAAAGAAAAA..............................................................................................................................................221.000.00---------1.00-------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................CCCCTATCTGAGGGCGGT................................................................................................1811.001.00-----1.00-----------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................AACCCCTATCTGAGGGAAAA................................................................................................201.000.00-1.00---------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................CCCCTATCTGAGGGCGACCA..............................................................................................2011.001.00-----1.00-----------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................CCCCTATCTGAGGGCGAAAA..............................................................................................2011.001.00-1.00---------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................AACCCCTATCTGAGGACA..................................................................................................181.000.00---------------------------1.00-------------------------------------------------------------------------------------------------------------
.......................................................................................................................................ACCCCTATCTGAGGGGT..................................................................................................1730.671.00----------------------------------------0.33------------------------------------------------------------------------0.33-----------------------
.................................................TATCTTCTCAGCAGAGGC.......................................................................................................................................................................................1830.670.67------------------------------------------------------------------------0.67----------------------------------------------------------------
.......................................................................................................................................ACCCCTATCTGAGGGGCAA................................................................................................1930.671.00----0.33-------------0.33----------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................ACCCCTATCTGAGGGTAAA................................................................................................1930.671.00------0.67----------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................ACCCCTATCTGAGGGAAC.................................................................................................1830.671.00-0.67---------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................ACCCCTATCTGAGGGACC.................................................................................................1830.671.00-----------0.33------------------------------------------------0.33----------------------------------------------------------------------------
........................................................................................................................................CCCCTATCTGAGGGCAAAA...............................................................................................1920.501.00----------------------------0.50------------------------------------------------------------------------------------------------------------
........................................................................................................................................CCCCTATCTGAGGGCACCA...............................................................................................1920.501.00------------------------------------------0.50----------------------------------------------------------------------------------------------
........................................................................................................................................CCCCTATCTGAGGGCCCA................................................................................................1820.501.00------------------------------------------------------------0.50----------------------------------------------------------------------------
........................................................................................................................................CCCCTATCTGAGGGCACC................................................................................................1820.501.00-------------------------------------------------------------------------------0.50---------------------------------------------------------
........................................................................................................................................CCCCTATCTGAGGGCAC.................................................................................................1720.501.00-----------------------------------------------------------0.50-----------------------------------------------------------------------------
........................................................................................................................................CCCCTATCTGAGGGCAACA...............................................................................................1920.501.00---------------------------------------------------------------------------------0.50-------------------------------------------------------
........................................................................................................................................CCCCTATCTGAGGGCCA.................................................................................................1720.501.00--------------------------------------------------------------------------------0.50--------------------------------------------------------
.......................................................................................................................................ACCCCTATCTGAGGGGTGA................................................................................................1930.331.00-0.33---------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................ACCCCTATCTGAGGGGGTG................................................................................................1930.331.00----------------------------------------------------------------------0.33------------------------------------------------------------------
.......................................................................................................................................ACCCCTATCTGAGGGGAG.................................................................................................1830.331.00---0.33-------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................ACCCCTATCTGAGGGTTG.................................................................................................1830.331.00-------------------------0.33---------------------------------------------------------------------------------------------------------------
.......................................................................................................................................ACCCCTATCTGAGGGTGGT................................................................................................1930.331.00--0.33--------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................ACCCCTATCTGAGGGAGG.................................................................................................1830.331.00-0.33---------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................ACCCCTATCTGAGGGGGGC................................................................................................1930.331.00------------------------------------------------------------------------------------0.33----------------------------------------------------
.......................................................................................................................................ACCCCTATCTGAGGGGATC................................................................................................1930.331.00-----------------------------------------------------------------------------------------------------------------------------------0.33-----
.......................................................................................................................................ACCCCTATCTGAGGGGAGA................................................................................................1930.331.00-0.33---------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................ACCCCTATCTGAGGGGGGG................................................................................................1930.331.00------------------------------0.33----------------------------------------------------------------------------------------------------------
.......................................................................................................................................ACCCCTATCTGAGGGTAC.................................................................................................1830.331.00--------0.33--------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................ACCCCTATCTGAGGGGGT.................................................................................................1830.331.00-0.33---------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................ACCCCTATCTGAGGGGCAC................................................................................................1930.331.00------0.33----------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................ACCCCTATCTGAGGGGCA.................................................................................................1830.331.00-----------------------------------------------------------------------------------0.33-----------------------------------------------------
.......................................................................................................................................ACCCCTATCTGAGGGTAA.................................................................................................1830.331.00------0.33----------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................ACCCCTATCTGAGGGGTTA................................................................................................1930.331.00-------------------------0.33---------------------------------------------------------------------------------------------------------------
.......................................................................................................................................ACCCCTATCTGAGGGGGCA................................................................................................1930.331.00--------------------------------------------------------------------------0.33--------------------------------------------------------------
.......................................................................................................................................ACCCCTATCTGAGGGTGAA................................................................................................1930.331.00------------------------0.33----------------------------------------------------------------------------------------------------------------
.......................................................................................................................................ACCCCTATCTGAGGGACCA................................................................................................1930.331.00-----------0.33-----------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................AAGAGCTCAGGAGAAG..1680.120.12----------------------------------------------------------------------------------------------------------------------------------------0.12

Antisense strand
GAGACTGTAATCTCTTTGGTACCTAACCCAGTGGGGGCAAGGTCAGGTATATCTTCTCAGCAGAGGCAGCTGGGATGAAGCTGGCTCCAGGAAAGAAGAAAAGACATAAAGCCAGGACAAAGGCATAACAGCCCAACCCCTATCTGAGGGCGCCACCCATGTCAGACCCCCTCTCCTTTCTGTGTCTTTTGTCTCTACAGGTCAGTGAAGCCCAGGAGGACCTGGGGGGGGCAAGAGCTCAGGAGAAGGC
..............................................................................................................................................((((((((.....)))...)))))....................................................................................
..................................................................................................................................131................................................182..................................................................
SizePerfect hitTotal NormPerfect NormSRR029125(GSM416754)
U2OS. (cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR029132(GSM416761)
MB-MDA231. (cell line)		SRR029129(GSM416758)
SW480. (cell line)		SRR037931(GSM510469)
293GFP. (cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR029127(GSM416756)
A549. (cell line)		SRR037935(GSM510473)
293cand3. (cell line)		SRR029131(GSM416760)
MCF7. (cell line)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR029124(GSM416753)
HeLa. (hela)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR029126(GSM416755)
143B. (cell line)		SRR189784SRR189782GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM416733(GSM416733)
HEK293. (cell line)		SRR029128(GSM416757)
H520. (cell line)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR015361(GSM380326)
Memory B cells (MM55). (B cell)		SRR191629(GSM715739)
5genomic small RNA (size selected RNA from to. (breast)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR191588(GSM715698)
52genomic small RNA (size selected RNA from t. (breast)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR444062(SRX128910)
Sample 27_3cDNABarcode: AF-PP-343: ACG CTC TT. (skin)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191491(GSM715601)
150genomic small RNA (size selected RNA from . (breast)		SRR191408(GSM715518)
88genomic small RNA (size selected RNA from t. (breast)		SRR038859(GSM458542)
MM386. (cell line)		SRR191414(GSM715524)
31genomic small RNA (size selected RNA from t. (breast)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR191405(GSM715515)
55genomic small RNA (size selected RNA from t. (breast)		SRR037932(GSM510470)
293cand4_rep1. (cell line)		SRR444047(SRX128895)
Sample 27_1cDNABarcode: AF-PP-343: ACG CTC TT. (skin)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		TAX577579(Rovira)
total RNA. (breast)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR191410(GSM715520)
20genomic small RNA (size selected RNA from t. (breast)		SRR040034(GSM532919)
G001N. (cervix)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR037936(GSM510474)
293cand1. (cell line)		TAX577580(Rovira)
total RNA. (breast)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR189785SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR191439(GSM715549)
176genomic small RNA (size selected RNA from . (breast)		SRR191623(GSM715733)
18genomic small RNA (size selected RNA from t. (breast)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR191444(GSM715554)
109genomic small RNA (size selected RNA from . (breast)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR191614(GSM715724)
92genomic small RNA (size selected RNA from t. (breast)		SRR191628(GSM715738)
52genomic small RNA (size selected RNA from t. (breast)		SRR191587(GSM715697)
50genomic small RNA (size selected RNA from t. (breast)		SRR191500(GSM715610)
7genomic small RNA (size selected RNA from to. (breast)		SRR191475(GSM715585)
18genomic small RNA (size selected RNA from t. (breast)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191418(GSM715528)
40genomic small RNA (size selected RNA from t. (breast)		SRR191416(GSM715526)
34genomic small RNA (size selected RNA from t. (breast)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191627(GSM715737)
45genomic small RNA (size selected RNA from t. (breast)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR038860(GSM458543)
MM426. (cell line)		TAX577744(Rovira)
total RNA. (breast)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		TAX577453(Rovira)
total RNA. (breast)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191610(GSM715720)
195genomic small RNA (size selected RNA from . (breast)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191412(GSM715522)
24genomic small RNA (size selected RNA from t. (breast)		SRR191420(GSM715530)
122genomic small RNA (size selected RNA from . (breast)		GSM532877(GSM532877)
G691N. (cervix)		SRR191485(GSM715595)
123genomic small RNA (size selected RNA from . (breast)		TAX577588(Rovira)
total RNA. (breast)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191447(GSM715557)
142genomic small RNA (size selected RNA from . (breast)		SRR191633(GSM715743)
85genomic small RNA (size selected RNA from t. (breast)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)		SRR191612(GSM715722)
65genomic small RNA (size selected RNA from t. (breast)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR191434(GSM715544)
171genomic small RNA (size selected RNA from . (breast)		SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR191459(GSM715569)
32genomic small RNA (size selected RNA from t. (breast)		SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)		TAX577740(Rovira)
total RNA. (breast)		SRR191621(GSM715731)
16genomic small RNA (size selected RNA from t. (breast)		SRR038855(GSM458538)
D10. (cell line)		SRR191626(GSM715736)
36genomic small RNA (size selected RNA from t. (breast)		SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)		SRR191433(GSM715543)
170genomic small RNA (size selected RNA from . (breast)		SRR040007(GSM532892)
G601T. (cervix)		SRR191570(GSM715680)
56genomic small RNA (size selected RNA from t. (breast)		SRR191403(GSM715513)
44genomic small RNA (size selected RNA from t. (breast)		SRR191580(GSM715690)
103genomic small RNA (size selected RNA from . (breast)		TAX577741(Rovira)
total RNA. (breast)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR038861(GSM458544)
MM466. (cell line)		SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)		TAX577742(Rovira)
total RNA. (breast)		SRR191417(GSM715527)
39genomic small RNA (size selected RNA from t. (breast)		SRR191411(GSM715521)
21genomic small RNA (size selected RNA from t. (breast)		SRR040017(GSM532902)
G645T. (cervix)		SRR191624(GSM715734)
31genomic small RNA (size selected RNA from t. (breast)		SRR191502(GSM715612)
9genomic small RNA (size selected RNA from to. (breast)		SRR191474(GSM715584)
16genomic small RNA (size selected RNA from t. (breast)		SRR038857(GSM458540)
D20. (cell line)		SRR191461(GSM715571)
35genomic small RNA (size selected RNA from t. (breast)		SRR191438(GSM715548)
175genomic small RNA (size selected RNA from . (breast)		SRR191619(GSM715729)
166genomic small RNA (size selected RNA from . (breast)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR038863(GSM458546)
MM603. (cell line)		SRR191445(GSM715555)
110genomic small RNA (size selected RNA from . (breast)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		SRR191458(GSM715568)
28genomic small RNA (size selected RNA from t. (breast)		SRR191473(GSM715583)
121genomic small RNA (size selected RNA from . (breast)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040027(GSM532912)
G220T. (cervix)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
...ACTGTAATCTCTTTGGCAG.................................................................................................................................................................................................................................... 197.000.00-2.00-------------1.004.00------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................AACAGCCCAACCCCTCGCC......................................................................................................... 193.000.00---------------------3.00-------------------------------------------------------------------------------------------------------------------
..............................................................................................GAAGAAAAGACATAAAGCG......................................................................................................................................... 191.000.00---------------------------------------------1.00-------------------------------------------------------------------------------------------
....................................................................................................................................................................................TGTGTCTTTTGTCTCTCAAA.................................................. 201.000.00---------------------1.00-------------------------------------------------------------------------------------------------------------------
........................................................................................AGGAAAGAAGAAAAGCATG............................................................................................................................................... 191.000.00---------------1.00-------------------------------------------------------------------------------------------------------------------------
...ACTGTAATCTCTTTGGCA..................................................................................................................................................................................................................................... 181.000.00-1.00---------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................TCTTTTGTCTCTACAAAAG............................................... 191.000.00---------------1.00-------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................CTCAGATAGGGGTTGGGCTGTTATGC...................................................................................................... 2611.001.00-------------------------------------------------1.00---------------------------------------------------------------------------------------
.AGACTGTAATCTCTTTAT....................................................................................................................................................................................................................................... 181.000.00----------------1.00------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................AAGGAGAGGGGGTCTG........................................................................ 1660.170.17------------0.17----------------------------------------------------------------------------------------------------------------------------