ID: uc004dmr.2_intron_8_0_chrX_48978873_r
GENE: (2)
chrX:48978823-48979021-


(3)
AGO2.ip 		(1)
AGO3.ip 		(1)
B-CELL 		(2)
BRAIN 		(5)
BREAST 		(10)
CELL-LINE 		(2)
CERVIX 		(4)
HEART 		(4)
HELA 		(3)
LIVER 		(2)
OTHER 		(19)
SKIN 		(1)
TESTES 		(2)
UTERUS 		(1)
XRN.ip

Sense strand
GGCCTTGGCGGATGGGGTGGTGTCCCAGGCTGTGAAGGAGCTCATTGCGGGTGAGTGATACCCCTTTACCCTTCCCCATTGAAGGAAGAAGAGGAAGAAGGTGGAAGGATAGAGTGGGACTTCATTGCTCCCTCCTATTCTTCCTTTAGAATCCAAGAAGTCTCTGGAAGAGAGAGAGAATGCGGGTGTCGACCCCACG
.....................................................(((((..((((((((.((((((((......................)).)))))).))))).)))...))))).........................................................................
..................................................51..........................................................................127......................................................................
SizePerfect hitTotal NormPerfect NormSRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR189783GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR189782GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR040040(GSM532925)
G612N. (cervix)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		TAX577746(Rovira)
total RNA. (breast)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040029(GSM532914)
G026T. (cervix)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR553576(SRX182782)
source: Testis. (testes)		TAX577579(Rovira)
total RNA. (breast)		TAX577744(Rovira)
total RNA. (breast)		TAX577738(Rovira)
total RNA. (breast)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
.....................................................................................................TGGAAGGATAGAGTGGGACTTC............................................................................22129.0029.007.00-1.003.00-4.002.00---2.00--1.001.00-1.00--1.00--1.00----1.00-1.00-1.00----------------1.00-1.00------
.....................................................................................................TGGAAGGATAGAGTGGGACTTCA...........................................................................23112.0012.00--2.002.00-1.00-----1.00--------1.00-----------1.001.00---1.00--------------1.001.00---
.....................................................................................................TGGAAGGATAGAGTGGGACTT.............................................................................21111.0011.00------2.004.001.002.00-1.00--1.00------------------------------------------
................GTGGTGTCCCAGGCTGTGAAGG.................................................................................................................................................................2219.009.009.00--------------------------------------------------------
.....................................................................................................TGGAAGGATAGAGTGGGACTTCATTGCTCCCTCC................................................................3418.008.00-5.00--2.00----------------------------------1.00-----------------
.....................................................................................................TGGAAGGATAGAGTGGGACTTCATTG........................................................................2617.007.00-6.00------1.00------------------------------------------------
.....................................................................................................TGGAAGGATAGAGTGGGACT..............................................................................2017.007.00----1.00-----------1.00-1.00-------1.00--------------1.001.001.00-------------
......................................................................................................GGAAGGATAGAGTGGGACTTCA...........................................................................2215.005.00--5.00------------------------------------------------------
.....................................................................................................TGGAAGGATAGAGTGGGACTTCAT..........................................................................2413.003.00---1.00-1.00-----------------------------------------1.00---------
.....................................................................................................TGGAAGGATAGAGTGGGACTTCATT.........................................................................2513.003.00--1.00-----1.00--------1.00---------------------------------------
.....................................................................................................TGGAAGGATAGAGTGGGACTTCATTGCT......................................................................2812.002.00----2.00----------------------------------------------------
.....................................................................................................TGGAAGGATAGAGTGGGACTTA............................................................................2212.0011.00------1.00--1.00-----------------------------------------------
...........................................................ACCCCTTTACCCTTCCCCAT........................................................................................................................2011.001.00------------------------------1.00--------------------------
.......................................................................................................................................................TCCAAGAAGTCTCTGGAAGAGAGAGA......................2611.001.00-------------------------------------------------1.00-------
....................................................................................................................................................................TGGAAGAGAGAGAGAATGCG...............2011.001.00---------------1.00-----------------------------------------
.....................................................................................................TGGAAGGATAGAGTGGGACTTCATTGCTCCCTCT................................................................341.000.00---------------------------------------------1.00-----------
.........................................................................................AGAGGAAGAAGGTGGAAGAGTT........................................................................................221.000.00----------------------------------1.00----------------------
................................TGAAGGAGCTCATTGCATAG...................................................................................................................................................201.000.00----1.00----------------------------------------------------
....................................................................................GAAGAAGAGGAAGAAGGTATC..............................................................................................211.000.00--------------------------------------1.00------------------
.....................................................................................................TGGAAGGATAGAGTGGGACTTCATTGC.......................................................................2711.001.00---1.00-----------------------------------------------------
................GTGGTGTCCCAGGCTGTGAAG..................................................................................................................................................................2111.001.00---1.00-----------------------------------------------------
.....................................................................................................TGGAAGGATAGAGTGGGACTTCAA..........................................................................2411.0012.00----------1.00----------------------------------------------
.....................GTCCCAGGCTGTGAAGGAGCTCATTGC.......................................................................................................................................................2711.001.00--------------------------------------------1.00------------
.....................................................................................................TGGAAGGATAGAGTGGGA................................................................................1811.001.00-----------------------------------1.00---------------------
............TGGGGTGGTGTCCCAGGCTGTGAAG..................................................................................................................................................................2511.001.00----------------------------------------1.00----------------
......................................................................................................GGAAGGATAGAGTGGGACTTCG...........................................................................221.000.00--1.00------------------------------------------------------
.................................................GGTGAGTGATACCCCCAAA...................................................................................................................................191.000.00-----------------------1.00---------------------------------
.....................................................................................................TGGAAGGATAGAGTGGGACTTATA..........................................................................2411.0011.00--1.00------------------------------------------------------
...................GTGTCCCAGGCTGTGAAGGAGCTCATTGCGGA....................................................................................................................................................321.000.00-------1.00-------------------------------------------------
..................................................................................AGGAAGAAGAGGAAGA.....................................................................................................1601.001.00------------------------1.00--------------------------------
.................................................................................................................................................................................GAATGCGGGTGTCGAGTG....181.000.00---------------1.00-----------------------------------------
....................................................................................................GTGGAAGGATAGAGTGGGACT..............................................................................2111.001.00------------------------------------1.00--------------------
....................................................................................................GTGGAAGGATAGAGTGGGACTTCA...........................................................................2411.001.00--------1.00------------------------------------------------
.................................GAAGGAGCTCATTGCGG.....................................................................................................................................................1720.500.50------------------------------------------------------0.50--
.........................................................................................................AGGATAGAGTGGGACTT.............................................................................1740.250.25-----------------0.25---------------------------------------
........................................................................................................................................................................AGAGAGAGAGAATGCGGTCT...........2040.250.25-------------------------------------------------------0.25-
.........................................................................................................AGGATAGAGTGGGACTTATG..........................................................................2040.250.25---0.25-----------------------------------------------------
........................................................................................................................................................................AGAGAGAGAGAATGCGG..............1740.250.25-----------0.25---------------------------------------------
..........................................................................................................................................................AAGAAGTCTCTGGAAGA............................1750.200.20--------------------------------------------------------0.20

Antisense strand
GGCCTTGGCGGATGGGGTGGTGTCCCAGGCTGTGAAGGAGCTCATTGCGGGTGAGTGATACCCCTTTACCCTTCCCCATTGAAGGAAGAAGAGGAAGAAGGTGGAAGGATAGAGTGGGACTTCATTGCTCCCTCCTATTCTTCCTTTAGAATCCAAGAAGTCTCTGGAAGAGAGAGAGAATGCGGGTGTCGACCCCACG
.....................................................(((((..((((((((.((((((((......................)).)))))).))))).)))...))))).........................................................................
..................................................51..........................................................................127......................................................................
SizePerfect hitTotal NormPerfect NormSRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR189783GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR189782GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR040040(GSM532925)
G612N. (cervix)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		TAX577746(Rovira)
total RNA. (breast)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040029(GSM532914)
G026T. (cervix)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR553576(SRX182782)
source: Testis. (testes)		TAX577579(Rovira)
total RNA. (breast)		TAX577744(Rovira)
total RNA. (breast)		TAX577738(Rovira)
total RNA. (breast)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
................................................................................................................................TCCCTCCTATTCTTCCTTG.................................................... 193.000.00------------2.00---------------------------------1.00----------
..................................................................................................................................................................TCTGGAAGAGAGAGAGAATCA................ 211.000.00---------------------1.00-----------------------------------
................................................................................................................................TCCCTCCTATTCTTCTTTT.................................................... 191.000.00----------------------------1.00----------------------------
............................................................CCCCTTTACCCTTCCACAC........................................................................................................................ 191.000.00---------------------------------------------------1.00-----
................................................................................................................................TCCCTCCTATTCTTCCGTT.................................................... 191.000.00-------------------------1.00-------------------------------
.............GCCTGGGACACCACCCC......................................................................................................................................................................... 1721.001.00-------------1.00-------------------------------------------