ID: uc004dgu.1_intron_7_0_chrX_46510659_r
GENE: SLC9A7(9)
chrX:46510609-46510800-


(2)
AGO2.ip 		(13)
B-CELL 		(6)
BRAIN 		(5)
BREAST 		(18)
CELL-LINE 		(2)
CERVIX 		(2)
HEART 		(1)
HELA 		(7)
LIVER 		(2)
OTHER 		(7)
SKIN 		(1)
TESTES

Sense strand
ATTACACCTACAACAATCTGTCGGTGGAATCAAGAAGTCGAACCAAGCAGGTGAGAGAGAGGCTTGGTACTCACGAGTTGCTTGTTAACACAGGGAAGGGGGAACTGCAGGGTTACAGCTTCCTTTTCCCTTCTCTGTGCAGCTCTTTGAGGTGTTACATTTCCTGGCAGAGAACTTCATCTTCTCCTACAT
........................................................................................(((((((((((((((((((........))).))))....)))))))))))).....................................................
.................................................................................82..........................................................142................................................
SizePerfect hitTotal NormPerfect NormSRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR189782SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR189784SRR189786GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR553576(SRX182782)
source: Testis. (testes)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		SRR037941(GSM510479)
293DroshaTN. (cell line)		TAX577579(Rovira)
total RNA. (breast)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR343334SRR040018(GSM532903)
G701N. (cervix)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR191529(GSM715639)
131genomic small RNA (size selected RNA from . (breast)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189787SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		GSM532874(GSM532874)
G699T. (cervix)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		TAX577739(Rovira)
total RNA. (breast)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR343335SRR191558(GSM715668)
61genomic small RNA (size selected RNA from t. (breast)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029125(GSM416754)
U2OS. (cell line)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
......................................................................................AACACAGGGAAGGGGGAACTGC....................................................................................22126.0026.007.00-2.003.00--2.00--2.00-3.00-1.00-------2.00-2.00-----------1.00-------------1.00--------------------
......................................................................................AACACAGGGAAGGGGGAACTGA....................................................................................2219.003.001.00------5.00--------------1.00------2.00----------------------------------------
.......................................................................................ACACAGGGAAGGGGGAACTGC....................................................................................2118.008.003.00--3.00-----1.00----------------------------------------------1.00-------------
.....................................................................................TAACACAGGGAAGGGGGAACTGC....................................................................................2317.007.003.00-1.00-----------1.00--1.00----------------------------------------1.00-----------
..............................CAAGAAGTCGAACCAAGCAG..............................................................................................................................................2016.006.00-----6.00----------------------------------------------------------------
..................................................GTGAGAGAGAGGCTTGGTACTCACGAGTTGCTTGTTAACACAGGGAAGGGGGAACTGCAGGGTTACAGCTTCCTTTTCCCTTCTCTGTGCAG..................................................9216.006.00----6.00-----------------------------------------------------------------
........................................................................................................................TCCTTTTCCCTTCTCTGTGCAGT.................................................234.000.00-------------2.00-----------2.00--------------------------------------------
.......................GTGGAATCAAGAAGTCGAAC.....................................................................................................................................................2014.004.00-------------------2.00----2.00---------------------------------------------
......................................................................................AACACAGGGAAGGGGGAACTAA....................................................................................2214.002.00--------4.00-------------------------------------------------------------
......................................................................................AACACAGGGAAGGGGGAACTG.....................................................................................2113.003.00---------1.00--2.00---------------------------------------------------------
...............................AAGAAGTCGAACCAAGCAGCT............................................................................................................................................213.000.00------1.00---1.00-------------------------------------------------1.00---------
......................................................................................AACACAGGGAAGGGGGAACT......................................................................................2012.002.00---------------------------------------1.00-----1.00------------------------
................................AGAAGTCGAACCAAGCAGCT............................................................................................................................................202.000.00--------------------1.00-------------------1.00-----------------------------
......................................................................................AACACAGGGAAGGGGGAACTGCA...................................................................................2312.002.001.00-------------1.00-------------------------------------------------------
......................GGTGGAATCAAGAAGTCGAACCAAGCAG..............................................................................................................................................2812.002.00----------------------------2.00-----------------------------------------
.....................................................................................TAACACAGGGAAGGGGGAACTG.....................................................................................2212.002.002.00---------------------------------------------------------------------
.TTACACCTACAACAAG...............................................................................................................................................................................162.000.00---------------------------------1.00--------------------1.00---------------
.....................................................................................TAACACAGGGAAGGGGGAACTGA....................................................................................2312.002.001.00------------------------------------1.00--------------------------------
......................................................................................AACACAGGGAAGGGGGAACTGCT...................................................................................2312.0026.00---------1.00------------------------------------1.00-----------------------
....................................................................................................................AGCTTCCTTTTCCCTTCTCTG.......................................................2112.002.00--2.00-------------------------------------------------------------------
.......................................................................................ACACAGGGAAGGGGGAACTGCAAAGA...............................................................................262.000.00------------------2.00---------------------------------------------------
......................................................................................AACACAGGGAAGGGGGAACCGC....................................................................................2212.001.00--------------------------------------------1.00----------1.00--------------
....................................................................................TTAACACAGGGAAGGGGGAACT......................................................................................2211.001.00----------------------1.00-----------------------------------------------
......................GGTGGAATCAAGAAGTCGAACCAAGCAGCTCT..........................................................................................................................................3211.002.00-1.00--------------------------------------------------------------------
......................................................................................AACACAGGGAAGGGGGAACTGTAT..................................................................................2411.003.00-1.00--------------------------------------------------------------------
.................................GAAGTCGAACCAAGCAGCT............................................................................................................................................191.000.00-----------------1.00----------------------------------------------------
....................................................................................................................................................................TGGCAGAGAACTTCATCTT.........1911.001.00--------------------------------------------------1.00-------------------
............................ATCAAGAAGTCGAACCAAGCAGCT............................................................................................................................................241.000.00--------------------------1.00-------------------------------------------
......................................................................................AACACAGGGAAGGGGGAAC.......................................................................................1911.001.00-----------------------------------------1.00----------------------------
................................................................................................................................CCTTCTCTGTGCAGCTCTTTGA..........................................2211.001.00------------------------------------------1.00---------------------------
..TACACCTACAACAATCTGT...........................................................................................................................................................................1911.001.00--------------------1.00-------------------------------------------------
.......................GTGGAATCAAGAAGTCGAA......................................................................................................................................................1921.001.00---------------0.50---------------0.50--------------------------------------
........................................................................................................................................GTGCAGCTCTTTGAGGTAGTA...................................211.000.00--1.00-------------------------------------------------------------------
.......................................................................................................................TTCCTTTTCCCTTCTCTGTGCATT.................................................241.000.00-----------------------------------------------1.00----------------------
.....................................................................................TAACACAGGGAAGGGGGAACTAT....................................................................................231.000.00--------------------------------1.00-------------------------------------
...................GTCGGTGGAATCAAGAAGTCGAACCAAGC................................................................................................................................................2911.001.00-1.00--------------------------------------------------------------------
...................................................................................................................................................................CTGGCAGAGAACTTCATCTT.........2011.001.00-----------1.00----------------------------------------------------------
..........................................................................................CAGGGAAGGGGGAACTCTG...................................................................................191.000.00-------------------------------------------1.00--------------------------
....................................................................................TTAACACAGGGAAGGGGGATT.......................................................................................211.000.00--------------------------------------1.00-------------------------------
.......................................................................................ACACAGGGAAGGGGGAACTG.....................................................................................2011.001.00-----------------------------------------------------------1.00----------
........................TGGAATCAAGAAGTCGAACCAAGCAG..............................................................................................................................................2611.001.00----------------1.00-----------------------------------------------------
................TCTGTCGGTGGAATCAAGAAGTCGAAC.....................................................................................................................................................2711.001.00-1.00--------------------------------------------------------------------
........................TGGAATCAAGAAGTCGAACCAAGCA...............................................................................................................................................2511.001.00-------------------------------------------------------------1.00--------
.......................................................................................ACACAGGGAAGGGGGAACTGCTTAA................................................................................2511.008.00------------------------------1.00---------------------------------------
...............ATCTGTCGGTGGAATCAAGAAGTCG........................................................................................................................................................2521.001.00---------------------------------------------------------1.00------------
..........................................................................................................GCAGGGTTACAGCTTTTGC...................................................................191.000.00------------1.00---------------------------------------------------------
.......................GTGGAATCAAGAAGTCGAACCAAGCAGC.............................................................................................................................................281.000.00-1.00--------------------------------------------------------------------
...............ATCTGTCGGTGGAATCAAGAAGTCGAAC.....................................................................................................................................................2811.001.00-1.00--------------------------------------------------------------------
.........ACAACAATCTGTCGGTGG.....................................................................................................................................................................1811.001.00----------1.00-----------------------------------------------------------
.......................................................................................ACACAGGGAAGGGGGAACTGA....................................................................................2111.001.00--------------1.00-------------------------------------------------------
......................................................................................AACACAGGGAAGGGGGAACTTC....................................................................................2211.002.00------------------------------------------------1.00---------------------
................................AGAAGTCGAACCAAGCAGC.............................................................................................................................................191.000.00----------1.00-----------------------------------------------------------
............................................................................................................................................................................AACTTCATCTTCTCCTACA.1911.001.00----------1.00-----------------------------------------------------------
.....................................................................................TAACACAGGGAAGGGGGAACTGCT...................................................................................2411.007.00----------------------------------1.00-----------------------------------
...............................AAGAAGTCGAACCAAGCAGCTC...........................................................................................................................................221.000.00------1.00---------------------------------------------------------------
.......................GTGGAATCAAGAAGTCGAACCAAGCAGCTC...........................................................................................................................................301.000.00-1.00--------------------------------------------------------------------
.....................................................................................TAACACAGGGAAGGGGGAACTGAT...................................................................................2411.002.00------1.00---------------------------------------------------------------
...........................AATCAAGAAGTCGAACCAAGCAGCT............................................................................................................................................251.000.00---------------------------------------------------1.00------------------
........TACAACAATCTGTCGGTGGAA...................................................................................................................................................................2111.001.00--------1.00-------------------------------------------------------------
...............................AAGAAGTCGAACCAAGCA...............................................................................................................................................1811.001.00---------------1.00------------------------------------------------------
...........AACAATCTGTCGGTGGGATC.................................................................................................................................................................201.000.00----------------------------------------------------1.00-----------------
........................TGGAATCAAGAAGTCGAACCAAGCAGC.............................................................................................................................................2711.001.00----------------1.00-----------------------------------------------------
.....................................................................................TAACACAGGGAAGGGGGAACTT.....................................................................................221.000.00--------------------------1.00-------------------------------------------
........................................................................................CACAGGGAAGGGGGAACTGCAGGGT...............................................................................2511.001.00------------------------------------1.00---------------------------------
................................................................................................................................................................TTCCTGGCAGAGAACTTAAT............201.000.00---------------1.00------------------------------------------------------
.................................................................................................................................................................TCCTGGCAGAGAACTTCATC...........2020.500.50------0.50---------------------------------------------------------------
..................TGTCGGTGGAATCAAGAAGTCG........................................................................................................................................................2220.500.50-0.50--------------------------------------------------------------------
....................TCGGTGGAATCAAGAAGTCG........................................................................................................................................................2020.500.50---------------------------------------------------------------0.50------
........................................................................................CACAGGGAAGGGGGAACTGC....................................................................................2060.500.50------------------------------------------------------------------0.170.170.17-
..........CAACAATCTGTCGGTGGAA...................................................................................................................................................................1920.500.50-----------------------------------------------------------------0.50----
..............AATCTGTCGGTGGAATCAAGAAGTC.........................................................................................................................................................2520.500.50----------------0.50-----------------------------------------------------
.................................................................................................................................................................TCCTGGCAGAGAACTTC..............1720.500.50------------------------------0.50---------------------------------------
.................CTGTCGGTGGAATCAAGAAGTC.........................................................................................................................................................2220.500.50----------------------------------------------------------------0.50-----
.......................GTGGAATCAAGAAGTC.........................................................................................................................................................1630.330.33-----------------0.33----------------------------------------------------
....................................................................................................................................................................TGGCAGAGAACTTCATC...........1750.200.20--------------------------------0.20-------------------------------------
..........................................................................................CAGGGAAGGGGGAACTGC....................................................................................1880.120.12---------------------------------------------------------------------0.12

Antisense strand
ATTACACCTACAACAATCTGTCGGTGGAATCAAGAAGTCGAACCAAGCAGGTGAGAGAGAGGCTTGGTACTCACGAGTTGCTTGTTAACACAGGGAAGGGGGAACTGCAGGGTTACAGCTTCCTTTTCCCTTCTCTGTGCAGCTCTTTGAGGTGTTACATTTCCTGGCAGAGAACTTCATCTTCTCCTACAT
........................................................................................(((((((((((((((((((........))).))))....)))))))))))).....................................................
.................................................................................82..........................................................142................................................
SizePerfect hitTotal NormPerfect NormSRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR189782SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR189784SRR189786GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR553576(SRX182782)
source: Testis. (testes)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		SRR037941(GSM510479)
293DroshaTN. (cell line)		TAX577579(Rovira)
total RNA. (breast)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR343334SRR040018(GSM532903)
G701N. (cervix)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR191529(GSM715639)
131genomic small RNA (size selected RNA from . (breast)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189787SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		GSM532874(GSM532874)
G699T. (cervix)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		TAX577739(Rovira)
total RNA. (breast)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR343335SRR191558(GSM715668)
61genomic small RNA (size selected RNA from t. (breast)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029125(GSM416754)
U2OS. (cell line)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
.............................................................................................GGAAGGGGGAACTGCATAGA............................................................................... 201.000.00---------------------------1.00------------------------------------------
..............................................................................................................................TCCCTTCTCTGTGCAGGC................................................ 181.000.00---------------------------1.00------------------------------------------
...........................AATCAAGAAGTCGAAG..................................................................................................................................................... 161.000.00--------------------------------------------------------------1.00-------
..................................................GTGAGAGAGAGGCTTGGT............................................................................................................................ 181.000.00-----------------------------------------------------1.00----------------
.............................................................................................................AAGGGAAAAGGAAGCTGTAACCC............................................................ 2311.001.00-------------------------------1.00--------------------------------------