| (5) BREAST | (14) CELL-LINE | (3) HEART | (2) LIVER | (1) OTHER | (1) SKIN | (1) XRN.ip |
| CTGGAAGTGACTTGATGATGTATTTGATCTGCACTATTAAGGATTTGTAGGGATTAAAAGATGGGAAAGTCAGACTATTTCAAAGAGTAGAAATTTCATAAGTAAAAGTATAGGGATTAACACAGAGAAACTTACTTGGGCTTTTATAAAACGGGAGTAAATAATTTAGAGGTAATTATTTTGTGTATTTTATATTCTAGATAATGTCACTGCATCCCAGATACATCTCTTTTCTTTGGCAAGTTGCAGA ....................................................................................((((((...((((...........................))))...))))))................................................................................................................. ...........................................................................76............................................................138.............................................................................................................. | Size | Perfect hit | Total Norm | Perfect Norm | SRR060169(GSM565979) 5-8F_cytoplasm. (cell line) | SRR390723(GSM850202) total small RNA. (cell line) | SRR191607(GSM715717) 192genomic small RNA (size selected RNA from . (breast) | SRR029128(GSM416757) H520. (cell line) | SRR039190(GSM494809) PBMCs were isolated by ficoll gradient from t. (blood) | SRR060168(GSM565978) 5-8F_nucleus. (cell line) | SRR015448(SRR015448) cytoplasmic small RNAs. (breast) | SRR314796(SRX084354) "Total RNA, fractionated (15-30nt)". (cell line) | SRR029130(GSM416759) DLD2. (cell line) | SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver) | SRR342901(SRX096797) small RNA seq of Left atrial tissue. (heart) | SRR015447(SRR015447) nuclear small RNAs. (breast) | SRR342895(SRX096791) small RNA seq of Left atrial tissue. (heart) | SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR207110(GSM721072) Nuclear RNA. (cell line) | SRR015446(SRR015446) smallRNAs high-throughput sequencing Total. (breast) | SRR189782 | SRR189785 | SRR039192(GSM494811) K562 cell line is derived from a CML patient . (cell line) | TAX577741(Rovira) total RNA. (breast) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR039622(GSM531985) HCV(+) Adjacent Tissue Sample. (liver) | SRR342896(SRX096792) small RNA seq of Right atrial tissue. (heart) | SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR330886(SRX091724) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR060981(GSM569185) Human centroblast [09-001]. (cell line) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR037934(GSM510472) 293cand4_rep3. (cell line) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ................................................................................CAAAGAGTAGAAATTGCTA....................................................................................................................................................... | 19 | 118.00 | 0.00 | 36.00 | - | 19.00 | 28.00 | 18.00 | 9.00 | 4.00 | - | 2.00 | - | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................CAAAGAGTAGAAATTGCT........................................................................................................................................................ | 18 | 71.00 | 0.00 | 27.00 | - | 18.00 | 7.00 | 10.00 | 2.00 | 4.00 | - | 2.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................CAAAGAGTAGAAATTGC......................................................................................................................................................... | 17 | 52.00 | 0.00 | - | 49.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................CAAAGAGTAGAAATTGATC....................................................................................................................................................... | 19 | 7.00 | 0.00 | - | - | - | - | - | - | - | 7.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................................................................CATCTCTTTTCTTTGGC.......... | 17 | 4 | 1.50 | 1.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.50 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................ATACATCTCTTTTCTTTTTG.......... | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .TGGAAGTGACTTGATGATGTATTTGATA............................................................................................................................................................................................................................. | 28 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | |
| ........................................................................................................................................................................................................................CCAGATACATCTCTTTTCTTTGGC.......... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ................................................................................CAAAGAGTAGAAATTTCTCA...................................................................................................................................................... | 20 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................................................................................ACATCTCTTTTCTTTGGCAAGTTGCA.. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................AGGGATTAACACAGAGAAACGTA.................................................................................................................... | 23 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | |
| ................................................................................CAAAGAGTAGAAATTGCAA....................................................................................................................................................... | 19 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................................................................................................................................................................................................TTTTCTTTGGCAAGTTGCAG. | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................TACATCTCTTTTCTTTTCTG......... | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | |
| ...........................................................................................................................................................................................................................GATACATCTCTTTTCTTTGGCAAG....... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ....................................................................................................................................................................................................................CATCCCAGATACATCTCTTTT................. | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................CAAAGAGTAGAAATTGATA....................................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................................................................................................................................................................................................................TACATCTCTTTTCTTGG............ | 17 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | |
| .......................................AGGATTTGTAGGGATTAAAAGATGGGA........................................................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................AGATACATCTCTTTTCTTT............. | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................ACATCTCTTTTCTTTGGCAAGTTG.... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................AGGGATTAAAAGATGGGAAAGTCA.................................................................................................................................................................................. | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ...................................................................................................................................................................................................................GCATCCCAGATACATCTCTTTTCTT.............. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................TCTCTTTTCTTTGGCAAGTTGC... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................TGTCACTGCATCCCAGATACATC....................... | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................TATTCTAGATAATGTCACTGCATCCCAGA............................. | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| .............................................................................................................................................................................................................................TACATCTCTTTTCTTTTTTG......... | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................................................................................................................................................................................GCATCCCAGATACATCTCT.................... | 19 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 |
| ..........................................................................................................................................................................................................AATGTCACTGCATCCCA............................... | 17 | 3 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | - | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| CTGGAAGTGACTTGATGATGTATTTGATCTGCACTATTAAGGATTTGTAGGGATTAAAAGATGGGAAAGTCAGACTATTTCAAAGAGTAGAAATTTCATAAGTAAAAGTATAGGGATTAACACAGAGAAACTTACTTGGGCTTTTATAAAACGGGAGTAAATAATTTAGAGGTAATTATTTTGTGTATTTTATATTCTAGATAATGTCACTGCATCCCAGATACATCTCTTTTCTTTGGCAAGTTGCAGA ....................................................................................((((((...((((...........................))))...))))))................................................................................................................. ...........................................................................76............................................................138.............................................................................................................. | Size | Perfect hit | Total Norm | Perfect Norm | SRR060169(GSM565979) 5-8F_cytoplasm. (cell line) | SRR390723(GSM850202) total small RNA. (cell line) | SRR191607(GSM715717) 192genomic small RNA (size selected RNA from . (breast) | SRR029128(GSM416757) H520. (cell line) | SRR039190(GSM494809) PBMCs were isolated by ficoll gradient from t. (blood) | SRR060168(GSM565978) 5-8F_nucleus. (cell line) | SRR015448(SRR015448) cytoplasmic small RNAs. (breast) | SRR314796(SRX084354) "Total RNA, fractionated (15-30nt)". (cell line) | SRR029130(GSM416759) DLD2. (cell line) | SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver) | SRR342901(SRX096797) small RNA seq of Left atrial tissue. (heart) | SRR015447(SRR015447) nuclear small RNAs. (breast) | SRR342895(SRX096791) small RNA seq of Left atrial tissue. (heart) | SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR207110(GSM721072) Nuclear RNA. (cell line) | SRR015446(SRR015446) smallRNAs high-throughput sequencing Total. (breast) | SRR189782 | SRR189785 | SRR039192(GSM494811) K562 cell line is derived from a CML patient . (cell line) | TAX577741(Rovira) total RNA. (breast) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR039622(GSM531985) HCV(+) Adjacent Tissue Sample. (liver) | SRR342896(SRX096792) small RNA seq of Right atrial tissue. (heart) | SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR330886(SRX091724) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR060981(GSM569185) Human centroblast [09-001]. (cell line) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR037934(GSM510472) 293cand4_rep3. (cell line) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ................................................................................................................................................................ATAATTTAGAGGTAATATT....................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |