ID: uc004dcz.2_intron_63_0_chrX_32583999_r.3p
GENE: DMD(15)
chrX:32583949-32584198-


(1)
BREAST
(3)
CELL-LINE
(4)
HEART
(2)
LIVER
(5)
OTHER
(1)
SKIN

Sense strand
TTTCTCTTCAAACTTCTTGGGATAATTAGATAGATTATAACTTTCTACCTCTATTTTTCTGAACTTTTGATCCTTTGCGGGCACGATTGAAATATTTTCTTATCTATGCAAATGAGCAAATACACGCAAAAGCAGATTGAACTATAGTGGTGTATGGAATGCAACCCAGGCTTATTCTGTGATCTTTCTTGTTTTAACAGGTTTTAAAAGCGGATCTAGAAAAGAAAAAGCAATCCATGGGCAAACTGTA
...........................................................................................................((((((((((..((((((.((.....((......))....))))))))((........))..))))))).)))......................................................................
...........................................................................................................108....................................................................................195.....................................................
SizePerfect hitTotal NormPerfect NormSRR189787SRR189784SRR189782SRR189786SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR037937(GSM510475)
293cand2. (cell line)
SRR189785SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR191430(GSM715540)
167genomic small RNA (size selected RNA from . (breast)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
................................................................................................................TGAGCAAATACACGCAAAACTGA...................................................................................................................2336.000.0020.0010.002.003.00----------1.00-
................................................................................................................TGAGCAAATACACGCAAAACTG....................................................................................................................227.000.00-5.001.00------1.00------
................................................................................................................TGAGCAAATACACGCAAAACTTA...................................................................................................................235.000.003.001.00-1.00------------
................................................................................................................TGAGCAAATACACGCAAAAGTGA...................................................................................................................233.000.002.00--1.00------------
................................................................................................................TGAGCAAATACACGCAAAATTGA...................................................................................................................232.000.001.001.00--------------
................................................................................................................TGAGCAAATACACGCAAAACTTT...................................................................................................................232.000.001.00--1.00------------
................................................................................................................TGAGCAAATACACGCAAAACTGT...................................................................................................................232.000.002.00---------------
................................................................................................................TGAGCAAATACACGCAAAAGTG....................................................................................................................222.000.00-2.00--------------
................................................................................................................TGAGCAAATACACGCAAAACTCA...................................................................................................................231.000.00--1.00-------------
...............................................................................................................................................................................................................AAGCGGATCTAGAAAAGAAAAAGCAAT................2711.001.00----1.00-----------
..................................................................................................................................................................................................................CGGATCTAGAAAAGAAAAA.....................1911.001.00------1.00---------
.................................................................................................................GAGCAAATACACGCAAAACTG....................................................................................................................211.000.00--------1.00-------
..................................................................................................................................................................................................................CGGATCTAGAAAAGAAAAAGC...................2111.001.00-----1.00----------
................................................................................................................TGAGCAAATACACGCAAAACTAA...................................................................................................................231.000.00-1.00--------------
................................................................................................................TGAGCAAATACACGCAAAAATG....................................................................................................................221.000.00-1.00--------------
................................................................................................................TGAGCAAATACACGCAAAAC......................................................................................................................201.000.00--1.00-------------
................................................................................................................TGAGCAAATACACGCAAAACAG....................................................................................................................221.000.00-1.00--------------
...........................................................................................................................................................................................................TTAAAAGCGGATCTAGAAAAGAA........................2311.001.00----1.00-----------
.....................................TAACTTTCTACCTCTAC....................................................................................................................................................................................................171.000.00-1.00--------------
................................................................................................................................................................................................................AGCGGATCTAGAAAAGAA........................1811.001.00-----1.00----------
................................................................................................................TGAGCAAATACACGCAAAACTT....................................................................................................................221.000.00--1.00-------------
................................................................................................................TGAGCAAATACACGCAAAAGTTC...................................................................................................................231.000.00---1.00------------
...........................................................................................................................................................................TTATTCTGTGATCTTTTTCA...........................................................201.000.00--1.00-------------
................................................................................................................TGAGCAAATACACGCAAAATTG....................................................................................................................221.000.00-1.00--------------
................................................................................................................TGAGCAAATACACGCAAAAGTT....................................................................................................................221.000.00---1.00------------
................................................................................................................TGAGCAAATACACGCAAAACAGA...................................................................................................................231.000.00-1.00--------------
................................................................................................................TGAGCAAATACACGCAATAC......................................................................................................................201.000.00-1.00--------------
................................................................................................................TGAGCAAATACACGCAAAAATGG...................................................................................................................231.000.00-1.00--------------
................................................................................................................................................................................................................AGCGGATCTAGAAAAGAAAAAGC...................2311.001.00----1.00-----------
................................................................................................................TGAGCAAATACACGCAAAAGTTA...................................................................................................................231.000.001.00---------------
.........................................................................................................................................................................................................TTTTAAAAGCGGATCTAGAAAAGAAAA......................2711.001.00-------1.00--------
................................................................................................................................................................................................................AGCGGATCTAGAAAA...........................1520.500.50---------------0.50

Antisense strand
TTTCTCTTCAAACTTCTTGGGATAATTAGATAGATTATAACTTTCTACCTCTATTTTTCTGAACTTTTGATCCTTTGCGGGCACGATTGAAATATTTTCTTATCTATGCAAATGAGCAAATACACGCAAAAGCAGATTGAACTATAGTGGTGTATGGAATGCAACCCAGGCTTATTCTGTGATCTTTCTTGTTTTAACAGGTTTTAAAAGCGGATCTAGAAAAGAAAAAGCAATCCATGGGCAAACTGTA
...........................................................................................................((((((((((..((((((.((.....((......))....))))))))((........))..))))))).)))......................................................................
...........................................................................................................108....................................................................................195.....................................................
SizePerfect hitTotal NormPerfect NormSRR189787SRR189784SRR189782SRR189786SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR037937(GSM510475)
293cand2. (cell line)
SRR189785SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR191430(GSM715540)
167genomic small RNA (size selected RNA from . (breast)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
..TCTCTTCAAACTTCTTGAG..................................................................................................................................................................................................................................... 192.000.00------------1.001.00--
..................................................................................................................................AGCAGATTGAACTATGA....................................................................................................... 171.000.00-----------1.00----
...................................TATAACTTTCTACCTCTAG.................................................................................................................................................................................................... 191.000.00--1.00-------------
......................................................................................................................................................................................................................TCTAGAAAAGAAAAAGGCT................. 191.000.00----------1.00-----