ID: uc004dbg.2_intron_8_0_chrX_24546304_f.5p
GENE: (9)
chrX:24546254-24546503+


(1)
B-CELL
(7)
BREAST
(5)
CELL-LINE
(3)
CERVIX
(1)
FIBROBLAST
(3)
HEART
(1)
HELA
(1)
OTHER
(52)
SKIN
(1)
TESTES

Sense strand
ATTCTACTGCTCCTAGACCCAGCCTGGAGCCTACCAGAGCTGCCCCTTTGGTAAGCATCTGAAAGTGCTGCTGAAGGAAAGATCATAAACACAGGAAGGGGCTCAGAGGGAGCTGCCTCTCTCCCCAGGTTGTCACATTAGTGTAGTTGATTTAGAAGGTTGCGTGTATTATGGTTTGGAGGAGGGAGAATTTTTTGCCTTGGCTACTTGCTTTGTGAATCCTTTGGACTTCAATTTCCTCTCTGATTTG
......................................................................................................................................................((((((..((..........))..))))))..(((.(((....))).)))..................................................
....................................................................................................................................................149................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189782SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189784SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189787SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR189786SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189783SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577588(Rovira)
total RNA. (breast)
TAX577746(Rovira)
total RNA. (breast)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040028(GSM532913)
G026N. (cervix)
SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
TAX577740(Rovira)
total RNA. (breast)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
GSM359178(GSM359178)
hela_nucl_t. (hela)
SRR191627(GSM715737)
45genomic small RNA (size selected RNA from t. (breast)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR343337TAX577745(Rovira)
total RNA. (breast)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR040014(GSM532899)
G623N. (cervix)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR040012(GSM532897)
G648N. (cervix)
TAX577744(Rovira)
total RNA. (breast)
TAX577589(Rovira)
total RNA. (breast)
SRR207117(GSM721079)
Whole cell RNA. (cell line)
.........................................................................................................................................................AGAAGGTTGCGTGTAC.................................................................................162283.002.5032.0029.0030.00--20.0017.0014.0013.0013.009.008.009.007.007.007.005.006.004.005.00-4.002.003.003.00-3.003.002.003.001.00-2.002.002.00--2.002.00-1.00-1.001.00--1.00---1.001.001.001.001.00---1.001.001.00-----1.00-1.00------------
.........................................................................................................................................................AGAAGGTTGCGTGTATC................................................................................17123.0010.00----23.00----------------------------------------------------------------------------
.........................................................................................................................................................AGAAGGTTGCGTGTAT.................................................................................16110.0010.00-2.00--2.001.00----2.00----1.00--1.00------------1.00-------------------------------------------------
.........................................................................................................................................................AGAAGGTTGCGTGTACAA...............................................................................1825.002.50-1.00----1.00----1.00--1.00-------1.00----------------------------------------------------------
.......................................................................................................................................................TTAGAAGGTTGCGTGTTCAG...............................................................................2033.673.33--0.33----1.67----0.330.67-0.33-------0.33---------------------------------------------------------
.......................................................................................................................................................TTAGAAGGTTGCGTGT...................................................................................1633.333.33--------1.33---------------0.33--------------0.67-0.33--------------------------------0.33-0.33----
.........................................................................................................................................................AGAAGGTTGCGTGTAG.................................................................................1623.002.501.00-1.00--------------------------------------------------------------1.00---------------
.........................................................................................................................................................AGAAGGTTGCGTGTACAT...............................................................................1823.002.50----------1.001.00-------------------------------------------------------1.00-------------
.......................................................................................................................................................TTAGAAGGTTGCGTGTTCAT...............................................................................2033.003.330.33-0.33--0.33-1.33----------------------0.33-----------------------------------------------0.33--
.........................................................................................................................................................AGAAGGTTGCGTGTA..................................................................................1522.502.50------0.500.50-----------------------------------------1.00---------------------0.50---------
.................................................................................................................................................................................GGAGGAGGGAGAATTTTTT......................................................1912.002.00-----------------------------------2.00---------------------------------------------
.........................................................................................................................................................AGAAGGTTGCGTGTATG................................................................................1712.0010.00----------------1.00-------------1.00--------------------------------------------------
........................................................................................................................................................TAGAAGGTTGCGTGT...................................................................................1542.002.00--------------------0.75------------------1.25-----------------------------------------
.........................................................................................................................................................AGAAGGTTGCGTGTAGATC..............................................................................1922.002.50----------------------1.00-----1.00----------------------------------------------------
.......................................................................................................................................................TTAGAAGGTTGCGTGTTCAA...............................................................................2031.673.33--------0.33-0.33---0.33-------------------------0.33--------------------------------0.33-------
.........................................................................................................................................................AGAAGGTTGCGTGTACATC..............................................................................1921.002.501.00--------------------------------------------------------------------------------
...................................................................................................................................................TGATTTAGAAGGTTGCATAA...................................................................................201.000.00---1.00-----------------------------------------------------------------------------
.......TGCTCCTAGACCCAGCCTGGAGCCTA.........................................................................................................................................................................................................................2611.001.00-------------------------------------------------------------1.00-------------------
..........................................................................................................................................................................................AGAATTTTTTGCCTTGGCTACTTGCTCTG...................................291.000.00-----------------------------------------1.00---------------------------------------
.........................................................................................................................................................AGAAGGTTGCGTGTATA................................................................................1711.0010.00-------------------------------1.00-------------------------------------------------
.........................................................................................................................................................AGAAGGTTGCGTGTAGAAA..............................................................................1921.002.50---------------------------------------------------------------1.00-----------------
.........................................................................................................................................................AGAAGGTTGCGTGTAGG................................................................................1721.002.50-----------------------------------------------1.00---------------------------------
..................................................GTAAGCATCTGAAAGTGCTGCTGAAG..............................................................................................................................................................................2611.001.00----------------------------------------------------------------1.00----------------
.........................................................................................................................................................AGAAGGTTGCGTGTACAG...............................................................................1821.002.50-------------1.00-------------------------------------------------------------------
...................................................................................................................................................TGATTTAGAAGGTTGTGTG....................................................................................191.000.00-------------------------------------------------------1.00-------------------------
.......................................................................................................................................................TTAGAAGGTTGCGTGTATAAGT.............................................................................221.000.00---------------------------------------------------------1.00-----------------------
.........................................................................................................................................................AGAAGGTTGCGTGTACA................................................................................1721.002.50--------------------------------------------------------------1.00------------------
..............................................TTTGGTAAGCATCTGG............................................................................................................................................................................................161.000.00---------1.00-----------------------------------------------------------------------
.........................................................................................................................................................AGAAGGTTGCGTGTACATA..............................................................................1921.002.50--------1.00------------------------------------------------------------------------
.....................................................................................................................................................................................GAGGGAGAATTTTTTTCAG..................................................191.000.00---1.00-----------------------------------------------------------------------------
.......................................................................................................................................................TTAGAAGGTTGCGTGTATAGTT.............................................................................221.000.00--------------------------------------------1.00------------------------------------
.......................................................................................................................................................TTAGAAGGTTGCGTGTTCA................................................................................1930.673.33----------------------------------------------------------------------0.33------0.33---
.......................................................................................................................................................TTAGAAGGTTGCGTGTTT.................................................................................1830.673.33----------------------------------------------------------------------0.33----0.33-----
........................................................................................................................................................TAGAAGGTTGCGTGTTCAT...............................................................................1940.502.00--------0.25----0.25-------------------------------------------------------------------
.................................................................................................................TGCCTCTCTCCCCAGGTT.......................................................................................................................1830.330.33------------------------------------------------------------------------0.33--------
.......................................................................................................................................................TTAGAAGGTTGCGTGTTCGT...............................................................................2030.333.33-------------0.33-------------------------------------------------------------------
.......................................................................................................................................................TTAGAAGGTTGCGTGTTCG................................................................................1930.333.33-------------------------------------------------------------------------------0.33-
........................................................................................................................................................TAGAAGGTTGCGTGTTCAA...............................................................................1940.252.00--------------------------------------------------------------------------------0.25

Antisense strand
ATTCTACTGCTCCTAGACCCAGCCTGGAGCCTACCAGAGCTGCCCCTTTGGTAAGCATCTGAAAGTGCTGCTGAAGGAAAGATCATAAACACAGGAAGGGGCTCAGAGGGAGCTGCCTCTCTCCCCAGGTTGTCACATTAGTGTAGTTGATTTAGAAGGTTGCGTGTATTATGGTTTGGAGGAGGGAGAATTTTTTGCCTTGGCTACTTGCTTTGTGAATCCTTTGGACTTCAATTTCCTCTCTGATTTG
......................................................................................................................................................((((((..((..........))..))))))..(((.(((....))).)))..................................................
....................................................................................................................................................149................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189782SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189784SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189787SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR189786SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189783SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577588(Rovira)
total RNA. (breast)
TAX577746(Rovira)
total RNA. (breast)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040028(GSM532913)
G026N. (cervix)
SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
TAX577740(Rovira)
total RNA. (breast)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
GSM359178(GSM359178)
hela_nucl_t. (hela)
SRR191627(GSM715737)
45genomic small RNA (size selected RNA from t. (breast)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR343337TAX577745(Rovira)
total RNA. (breast)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR040014(GSM532899)
G623N. (cervix)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR040012(GSM532897)
G648N. (cervix)
TAX577744(Rovira)
total RNA. (breast)
TAX577589(Rovira)
total RNA. (breast)
SRR207117(GSM721079)
Whole cell RNA. (cell line)
......................................................................................................................................................................................AGGGAGAATTTTTTGTTG.................................................. 1817.000.00---14.00----------------3.00------------------------------------------------------------
.....................................................................................................................................................................................GAGGGAGAATTTTTTGTG................................................... 186.000.00---6.00-----------------------------------------------------------------------------
......................................................................................................................................................................................AGGGAGAATTTTTTGGTG.................................................. 182.000.00---2.00-----------------------------------------------------------------------------
.....................................................................................................................................................................................GAGGGAGAATTTTTTGTC................................................... 182.000.00---2.00-----------------------------------------------------------------------------
...................................................................................................................CCTCTCTCCCCAGGTTGCTA................................................................................................................... 201.000.00-------------------------1.00-------------------------------------------------------
....................................................AAGCATCTGAAAGTGCTGGTT................................................................................................................................................................................. 211.000.00--------------------------------------------------------1.00------------------------
......................................................................................................................................................................................AGGGAGAATTTTTTGTG................................................... 171.000.00---1.00-----------------------------------------------------------------------------
...............................................................................................................................GGTTGTCACATTAGTGTAGAAG..................................................................................................... 221.000.00------------------------------------1.00--------------------------------------------
..............................................................................................................AGCTGCCTCTCTCCCCAA.......................................................................................................................... 181.000.00------------------------------------------------1.00--------------------------------
................................................................................................................................GTTGTCACATTAGTGTATGAG..................................................................................................... 211.000.00-------------------------1.00-------------------------------------------------------
......................................................................................................................................................................................AGGGAGAATTTTTTGATG.................................................. 181.000.00---1.00-----------------------------------------------------------------------------
.......................................................................................................................................................................ATTATGGTTTGGAGGCCAG................................................................ 191.000.00--------------------1.00------------------------------------------------------------
................................................................................................................................GTTGTCACATTAGTGTATGAA..................................................................................................... 211.000.00-------------------------1.00-------------------------------------------------------
...........................................................................................................................................................................................................................TCCTTTGGACTTCAACGC............. 181.000.00---------------------------------------------------------------------1.00-----------
............................................................................................................GGAGCTGCCTCTCTCCCCATGA........................................................................................................................ 221.000.00---------------------------------------------1.00-----------------------------------
.................................................GGTAAGCATCTGAAAGGCT...................................................................................................................................................................................... 191.000.00------------------------------------1.00--------------------------------------------