ID: uc004dbc.2_intron_10_0_chrX_24091381_f.3p
GENE: (11)
chrX:24094639-24094888+


(1)
AGO2.ip 		(2)
B-CELL 		(2)
BRAIN 		(3)
BREAST 		(15)
CELL-LINE 		(2)
CERVIX 		(1)
HEART 		(5)
HELA 		(5)
LIVER 		(2)
OTHER 		(1)
RRP40.ip 		(14)
SKIN 		(1)
TESTES 		(2)
XRN.ip

Sense strand
AGACTGTCTCAGAAAAAACACACAAAAGCAAGAATAAAAAAGAATCTAAGAATATAGTGTGGGCTTTCTTTATGGAGGAGCAGGCTTTGGGAACAAATTTGAATTCAGAAGATAAGCAGGTAAAATTTATCACAAGATTGTGTGGTAATGAGAGTGAAGTGGATGTAAGATTTATGATTTCTTTTATTTTCATTTTGCAGTTTAATTGGTTGGGGTCAGATAAGAAGAGGAGTGACAATCAAGCCAACAG
..............................................................................................((((((..(((((....................(((((((......)))))))((....))....)))))...)))))).............................................................................
..............................................................................................95.............................................................................174..........................................................................
SizePerfect hitTotal NormPerfect NormSRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR037938(GSM510476)
293Red. (cell line)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189784SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040010(GSM532895)
G529N. (cervix)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		GSM359176(GSM359176)
hela_chip_smrna_pure. (hela)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR553576(SRX182782)
source: Testis. (testes)		SRR191393(GSM715503)
22genomic small RNA (size selected RNA from t. (breast)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR191420(GSM715530)
122genomic small RNA (size selected RNA from . (breast)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040028(GSM532913)
G026N. (cervix)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
.......................................................................................................................GTAAAATTTATCACAAGATTGTGTGGTAATGAGAGTGAAGTGGATGTAAGATTTATGATTTCTTTTATTTTCATTTTGCA...................................................8016.006.00----6.00------------------------------------------------
..................................................................................................................................................AATGAGAGTGAAGTGGATGTAAGT................................................................................245.000.00-----5.00-----------------------------------------------
........................................................................................................................TAAAATTTATCACAAGATTGTGTGGTAATGAGAGTGAAGTGGATGTAAGATTTATGATTTC.....................................................................6114.004.00------4.00----------------------------------------------
................................................................................................................................................................................................................................AAGAGGAGTGACAATCAAGCCAACAGCAG2923.500.50--3.000.50-------------------------------------------------
..............................................................................................................................................................GTGGATGTAAGATTTATGATTTCT....................................................................2413.003.00-------3.00---------------------------------------------
..................................................AATATAGTGTGGGCTTTCTTTATGGAGGAGCAGGCTTTGGGAACAAATTTGAATTCAGAAGATAAGCA....................................................................................................................................6813.003.00----3.00------------------------------------------------
.........................................................................................................................................................................ATTTATGATTTCTTTTATTTTCATTTTGCAG..................................................3113.003.00--3.00--------------------------------------------------
...................................................................................................................................................................................................................................AGGAGTGACAATCAAGCCAACAGCAG263.000.00--3.00--------------------------------------------------
..............................................................................................................................................................................................................TGGTTGGGGTCAGATAAGAAGAGGAA..................262.000.00-2.00---------------------------------------------------
.............................................................................................................................................................................................................................AAGAAGAGGAGTGACAATA..........192.000.00--------2.00--------------------------------------------
....................................................................TTTATGGAGGAGCAGGCTTTGGGAACAAATT.......................................................................................................................................................3112.002.00----------------2.00------------------------------------
...................................................................................................TGAATTCAGAAGATAAGCAG...................................................................................................................................2012.002.00-2.00---------------------------------------------------
................................................................................................................................................................................ATTTCTTTTATTTTCATTTTGCAGTTTAATTGG.........................................3312.002.00--2.00--------------------------------------------------
.........................................................................................GGAACAAATTTGAATTCAGAAGATA........................................................................................................................................2512.002.00----------------------1.00-1.00----------------------------
........................................................................TGGAGGAGCAGGCTTTGGGAACAAATATG.....................................................................................................................................................292.000.002.00----------------------------------------------------
.......................................................................ATGGAGGAGCAGGCTTTGGG...............................................................................................................................................................2012.002.00-2.00---------------------------------------------------
....................................................................TTTATGGAGGAGCAGGCTTTGG................................................................................................................................................................2212.002.00-2.00---------------------------------------------------
...................................................................................................TGAATTCAGAAGATAAGCAGGTAAAAT............................................................................................................................2712.002.00-2.00---------------------------------------------------
............................................................................................................................................................................TATGATTTCTTTTATTTTCATTTTGCAG..................................................2812.002.00---2.00-------------------------------------------------
............................................................................................................................................................................................................ATTGGTTGGGGTCAGATAAGA.........................2122.002.001.00------1.00---------------------------------------------
.............................................................................................................................................................................................................TTGGTTGGGGTCAGATAAG..........................1921.501.50-1.00---------------------------------------0.50-----------
............................................................................................................................................................................................................ATTGGTTGGGGTCAGATAAGAAGAGGAGCGAC..............3221.500.501.50----------------------------------------------------
................................................................................................................................................................................................................................AAGAGGAGTGACAATCAAGCCAACAGC2721.500.501.50----------------------------------------------------
..............................................................................................................................................................................................................................AGAAGAGGAGTGACAATCAAGCCAAC..2621.501.501.50----------------------------------------------------
.................................................................................................................................................................................................................TTGGGGTCAGATAAGAAGAGGAGCG................2521.000.501.00----------------------------------------------------
.................................................................................................................................................................................................................................AGAGGAGTGACAATCAAGCCAACAGCAG281.000.001.00----------------------------------------------------
..................................................................................................................................................................................................................TGGGGTCAGATAAGAAGAGGAGTGAC..............2621.001.00---1.00-------------------------------------------------
.......................................................................ATGGAGGAGCAGGCTTTGGGAAC............................................................................................................................................................2311.001.001.00----------------------------------------------------
.......................................................................................................................................................GAGTGAAGTGGATGTAAGATTTATGA.........................................................................2611.001.00-------------1.00---------------------------------------
................................................................................................................................................................................ATTTCTTTTATTTTCATTTTGCAGTTCAAT............................................301.000.00---1.00-------------------------------------------------
................................................................................CAGGCTTTGGGAACAAATTTGAATTCAGAAG...........................................................................................................................................3111.001.00--------------1.00--------------------------------------
............................................................................................................................................................................................................ATTGGTTGGGGTCAGATAAGAAGAGGAGCG................3021.000.501.00----------------------------------------------------
.......................................................................................................................GTAAAATTTATCACAAGATTGTGTGG.........................................................................................................2611.001.00---------------------------1.00-------------------------
.......................................................AGTGTGGGCTTTCTTTATGGAGGAGCAGGCTT...................................................................................................................................................................3211.001.001.00----------------------------------------------------
.........................................................................................................................................................................................................................AGATAAGAAGAGGAGTGACAATCAA........2521.001.00-----------------1.00-----------------------------------
...............................................................................................................................................................TGGATGTAAGATTTATG..........................................................................1711.001.00---------------1.00-------------------------------------
.......................................................................................................................................................................AGATTTATGATTTCTTTTATTT.............................................................2211.001.00---1.00-------------------------------------------------
......................................................................................................................................................................................................................GTCAGATAAGAAGAGGAGTG................2021.001.00-1.00---------------------------------------------------
.......................................................................................TGGGAACAAATTTGAATTCAGAAGATAAGCAGG..................................................................................................................................3311.001.00---1.00-------------------------------------------------
.......................................................................ATGGAGGAGCAGGCTTTGGA...............................................................................................................................................................201.000.00-1.00---------------------------------------------------
......................................................................................................................................AGATTGTGTGGTAATGAG..................................................................................................1891.001.00--------------------------------0.89-------------------0.11
..............................................................................................................................................................GTGGATGTAAGATTTATGA.........................................................................1911.001.00--------------------1.00--------------------------------
.............................................................................GAGCAGGCTTTGGGAACAAAT........................................................................................................................................................2111.001.00-------------1.00---------------------------------------
........................................................................TGGAGGAGCAGGCTTTGGGAACAAATATT.....................................................................................................................................................291.000.001.00----------------------------------------------------
...................................................................................................................................ACAAGATTGTGTGGTAATGAGAGTGAAGTGGATGTAAGATTTATGATTTCTTTTA................................................................5511.001.00------1.00----------------------------------------------
..........................................AATCTAAGAATATAGTGTGGGCT.........................................................................................................................................................................................2311.001.001.00----------------------------------------------------
..........................................................................................................................................................................TTTATGATTTCTTTTATCAAC...........................................................211.000.00---1.00-------------------------------------------------
......................................................................TATGGAGGAGCAGGCTGGG.................................................................................................................................................................191.000.001.00----------------------------------------------------
.............................................................................................................................................................................................................TTGGTTGGGGTCAGATAAGAAGAGGAGCG................291.000.00---1.00-------------------------------------------------
....................................................................................................................................................................................................................GGGTCAGATAAGAAGGAAA...................191.000.00-------------------------1.00---------------------------
..................................................................................................................................................................................................................TGGGGTCAGATAAGAATT......................181.000.00------------------------------1.00----------------------
...................................................................................GCTTTGGGAACAAATTTGAATTCAGAAGATAAG......................................................................................................................................3311.001.00---------------1.00-------------------------------------
..............................................................................AGCAGGCTTTGGGAACAAATTTG.....................................................................................................................................................2311.001.00-----------1.00-----------------------------------------
.........................................................................GGAGGAGCAGGCTTTGGG...............................................................................................................................................................1811.001.00-1.00---------------------------------------------------
...................................................................................................TGAATTCAGAAGATAAGCAGGTAA...............................................................................................................................2411.001.00------------1.00----------------------------------------
...............................................................................................................................................................................................ATTTTGCAGTTTAATTGGTTGGGG...................................2411.001.00---1.00-------------------------------------------------
.......................................................................ATGGAGGAGCAGGCTTTGGGA..............................................................................................................................................................2111.001.00---1.00-------------------------------------------------
................................................................................................................................................................................................................GTTGGGGTCAGATAAGAAGAGGAGTGATA.............291.000.00---------1.00-------------------------------------------
..................................................................TCTTTATGGAGGAGCAGGCTTTGGGAC.............................................................................................................................................................271.000.001.00----------------------------------------------------
.................................................................................................................................................................................TTTCTTTTATTTTCATTGACA....................................................211.000.00--1.00--------------------------------------------------
....................................................................................CTTTGGGAACAAATTTGAATTCAGAAGATAAGC.....................................................................................................................................3311.001.00------------1.00----------------------------------------
.........................................................................................................................................TTGTGTGGTAATGAGAGTAGC............................................................................................211.000.00--------------1.00--------------------------------------
...........................................................................AGGAGCAGGCTTTGGGAACAAATCTG.....................................................................................................................................................261.000.00---1.00-------------------------------------------------
......................................................................................................................................................AGAGTGAAGTGGATGTAAGATTTATG..........................................................................2611.001.00--------1.00--------------------------------------------
................................................................................................................................................................................................................GTTGGGGTCAGATAAGAAGAGGAGCG................261.000.00--1.00--------------------------------------------------
................................................AGAATATAGTGTGGGCTTTCT.....................................................................................................................................................................................2111.001.00-----------1.00-----------------------------------------
..........................................................................................................................................................................................................TAATTGGTTGGGGTCAGATAAGA.........................2321.001.00-1.00---------------------------------------------------
............................................................................................................................................................AAGTGGATGTAAGATTTATGATTT......................................................................2411.001.00----------------------------1.00------------------------
......................................................................................................................................................................................................AGTTTAATTGGTTGGGGTCAGATAAGAAGAGG....................3211.001.00------------------1.00----------------------------------
.........................................................................................................................................................................ATTTATGATTTCTTTTATTTTCATCTTG.....................................................281.000.00--1.00--------------------------------------------------
..................................................................TCTTTATGGAGGAGCAGGCTTTGGGAAC............................................................................................................................................................2811.001.001.00----------------------------------------------------
......................................................................................................................................................AGAGTGAAGTGGATGTAAGATTT.............................................................................2311.001.00---------1.00-------------------------------------------
...........................GCAAGAATAAAAAAGAATGTT..........................................................................................................................................................................................................211.000.00---------------------1.00-------------------------------
..............................................................................................................................................................................................................................AGAAGAGGAGTGACAAGCC.........191.000.00---1.00-------------------------------------------------
........................................................................................................................................................AGTGAAGTGGATGTAAGACTT.............................................................................211.000.00----------1.00------------------------------------------
.........................................................................................................................................................................ATTTATGATTTCTTTTATTTTCATTTTGCAGTT................................................3311.001.00---1.00-------------------------------------------------
......................................................................TATGGAGGAGCAGGCTTTGGGAACAAA.........................................................................................................................................................2711.001.00-1.00---------------------------------------------------
........................................................................TGGAGGAGCAGGCTTTGGGAACAATTTG......................................................................................................................................................281.000.001.00----------------------------------------------------
..................................................................................................................................................................................TTCTTTTATTTTCATTTTGCAG..................................................2211.001.00-----------------------1.00-----------------------------
..............................................................................................................................................................................................................TGGTTGGGGTCAGATAAGAAGAGGAGCG................281.000.001.00----------------------------------------------------
........................................................................................GGGAACAAATTTGAATTCAGAAG...........................................................................................................................................2311.001.00-------------------1.00---------------------------------
.......................................................................................................................................................................AGATTTATGATTTCTTTTATTTTCATTTTGCAG..................................................3311.001.001.00----------------------------------------------------
...........................................................................................................................................................................................................AATTGGTTGGGGTCAGATAAGAAGAGGAGTGAC..............3321.001.00-----------------------------1.00-----------------------
........................................................................................................................................................AGTGAAGTGGATGTAAGATTT.............................................................................2111.001.00----------1.00------------------------------------------
..........AGAAAAAACACACAAAAGCAAGA.........................................................................................................................................................................................................................2311.001.00-------------------------------1.00---------------------
....................................................................................................................................................................................................................GGGTCAGATAAGAAGAGGAGTG................2220.500.50-----------------------------------0.50-----------------
........................................................................................................................................................................................................................CAGATAAGAAGAGGAGTG................1820.500.50---------------------------------------0.50-------------
................................................................................................................................................................................................................................AAGAGGAGTGACAATCAAGCCAACAGATG2920.500.50--0.50--------------------------------------------------
.............................................................................................................................................................................................................TTGGTTGGGGTCAGATAAGAAGAGGAGTGACA.............3220.500.50----------------------------------0.50------------------
........................................................................................................................................................................................................TTTAATTGGTTGGGGTCAGATAAGAAGAGGAGT.................3320.500.50------------------0.50----------------------------------
..........................................................................................................................................................................................................TAATTGGTTGGGGTCAG...............................1740.500.500.50----------------------------------------------------
..................................................................................................................................................................................................................TGGGGTCAGATAAGAAGAGGAG..................2220.500.50---------------------------------------------0.50-------
..............................................................................................................................................................................................................................AGAAGAGGAGTGACAATCAAGCCAACAGCAG3120.500.500.50----------------------------------------------------
.............................................................................................................................................................................................................TTGGTTGGGGTCAGATAAGAAGAGGAGTG................2920.500.500.50----------------------------------------------------
..............................................................................................................................................................................................................................AGAAGAGGAGTGACAATCAAGCCAACAGC2920.500.500.50----------------------------------------------------
..................................................................................................................................................................................................................TGGGGTCAGATAAGAAGAGGAGCGAC..............2620.500.500.50----------------------------------------------------
.....................................................................................................................................................................................................................GGTCAGATAAGAAGAGGAGTGACAA............2520.500.50--------------------------------------------0.50--------
......................................................................................................................................................................................................................GTCAGATAAGAAGAGGAG..................1820.500.50-0.50---------------------------------------------------
...................................................................................................................................................................................................................GGGGTCAGATAAGAAGAGGAGTGACAATCAAG.......3220.500.50--0.50--------------------------------------------------
............................................................................................................................................................................................................ATTGGTTGGGGTCAGATAAGAAGAGGAGTGACA.............3320.500.500.50----------------------------------------------------
...................................................................................................................................................................................................................GGGGTCAGATAAGAAGAGGAGTGACAATC..........2920.500.50--0.50--------------------------------------------------
............................................................................................................................................................................................................ATTGGTTGGGGTCAGATAAGAAGAGGAG..................2820.500.500.50----------------------------------------------------
..............................................................................................................................................................................................................................AGAAGAGGAGTGACAATCAAGCCAACAG2820.500.500.50----------------------------------------------------
............................................................................................................................................................AAGTGGATGTAAGATTT.............................................................................1720.500.50------------------------------------0.50----------------
................................................................................................................................................................................................................GTTGGGGTCAGATAAGAAGAGGAGT.................2520.500.50-------------------------------------0.50---------------
................................................................................................................................................................................................................................AAGAGGAGTGACAATCAAGCCAACAG2620.500.500.50----------------------------------------------------
.................................................GAATATAGTGTGGGC..........................................................................................................................................................................................1520.500.50-------------------------------------------0.50---------
...........................................................................................................................................................................................................AATTGGTTGGGGTCAGATAAGAAGAGG....................2720.500.50----------------------------------------0.50------------
................................................................................................................................................................................................................GTTGGGGTCAGATAAGAAGAGGAGTG................2620.500.50-0.50---------------------------------------------------
............................................................................................................................................................................................................ATTGGTTGGGGTCAGATAAG..........................2020.500.50--------------------------0.50--------------------------
.....................................................................................................................................................................................................................GGTCAGATAAGAAGAGGAGTGACAACC..........2720.500.500.50----------------------------------------------------
.................................................................................................................................................................................................................TTGGGGTCAGATAAGAAGAGGAGTGACA.............2820.500.500.50----------------------------------------------------
.....................................................................................................................................................................................................................................GAGTGACAATCAAGCCAACAG2120.500.50--------0.50--------------------------------------------
.................................................................................................................................................................................................................................AGAGGAGTGACAATCAAG.......1820.500.50---------0.50-------------------------------------------
.............................................................................................................................................................................................................................AAGAAGAGGAGTGACAATCAAGC......2320.500.50----------------------------------------------0.50------
...................................................................................................................................................................................................................GGGGTCAGATAAGAAGAGGAGTG................2320.500.50---------------------------------0.50-------------------
..........................................................................................................................................................................................................TAATTGGTTGGGGTCAGAT.............................1920.500.50-0.50---------------------------------------------------
........................................................................................................................................................................................................................CAGATAAGAAGAGGAGTGACAATCA.........2520.500.50-------------------0.50---------------------------------
........................................................................................................................................................................................................TTTAATTGGTTGGGGTCAGATAAGAAG.......................2720.500.50------------------------------------------0.50----------
.................................................................................................................................................................................................................TTGGGGTCAGATAAGAAGAGGAG..................2320.500.500.50----------------------------------------------------
................................................................................................................................................................................................................................AAGAGGAGTGACAATCAAG.......1920.500.50--------------------------0.50--------------------------
.....................................................................................................................................................................................................................GGTCAGATAAGAAGAGGAGTGACAATCAAGCC.....3220.500.50--------------------------------------0.50--------------
...........................................................................................................................................................................................................................ATAAGAAGAGGAGTGACAA............1920.500.50-----------------0.50-----------------------------------
..........................................................................................................................................................................................................................................ACAATCAAGCCAACAG1630.330.33-----------------------------------------------0.33-----
......................................................................................................................................AGATTGTGTGGTAATGAGAG................................................................................................2080.250.25--------------------------------------------------0.120.12-
...........................................................................................................................................................................................................AATTGGTTGGGGTCAGA..............................1740.250.25-0.25---------------------------------------------------
.....................................................................................................................................................................TAAGATTTATGATTTC.....................................................................1650.200.20--0.20--------------------------------------------------
.......................AAAAGCAAGAATAAAAAA.................................................................................................................................................................................................................1870.140.14---------------------------------0.14-------------------

Antisense strand
AGACTGTCTCAGAAAAAACACACAAAAGCAAGAATAAAAAAGAATCTAAGAATATAGTGTGGGCTTTCTTTATGGAGGAGCAGGCTTTGGGAACAAATTTGAATTCAGAAGATAAGCAGGTAAAATTTATCACAAGATTGTGTGGTAATGAGAGTGAAGTGGATGTAAGATTTATGATTTCTTTTATTTTCATTTTGCAGTTTAATTGGTTGGGGTCAGATAAGAAGAGGAGTGACAATCAAGCCAACAG
..............................................................................................((((((..(((((....................(((((((......)))))))((....))....)))))...)))))).............................................................................
..............................................................................................95.............................................................................174..........................................................................
SizePerfect hitTotal NormPerfect NormSRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR037938(GSM510476)
293Red. (cell line)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189784SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040010(GSM532895)
G529N. (cervix)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		GSM359176(GSM359176)
hela_chip_smrna_pure. (hela)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR553576(SRX182782)
source: Testis. (testes)		SRR191393(GSM715503)
22genomic small RNA (size selected RNA from t. (breast)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR191420(GSM715530)
122genomic small RNA (size selected RNA from . (breast)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040028(GSM532913)
G026N. (cervix)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
.......................AAAAGCAAGAATAAAAATTT............................................................................................................................................................................................................... 201.000.00--1.00--------------------------------------------------
.............................................................................................................................................................................................................ATCTGACCCCAACCAA............................. 1660.170.17------------------------------------------------0.17----
.........................................................................CAAAGCCTGCTCCTCC................................................................................................................................................................. 1670.140.14-------------------------------------------------0.14---