ID: uc004dae.2_intron_9_0_chrX_21899091_f.3p
GENE: (10)
chrX:21900351-21900600+


(1)
AGO2.ip 		(1)
B-CELL 		(4)
BREAST 		(14)
CELL-LINE 		(1)
FIBROBLAST 		(2)
HEART 		(1)
HELA 		(1)
LIVER 		(13)
SKIN 		(2)
XRN.ip

Sense strand
AAGGTTTTTGAACTTTGAAATAATATAAACTCATTTTTTTTAAGTAGTAGAGATCTAAGAAGGAATGGCAGAGATTTAAAGAAAGTAGAGAAGTCAAGTGTAATCTCTAATTCAGTCACAGTAAAATATCTTCTGACTCATAGAAATATGGTTTCTACTCAGACCTCTCACAGTTGGTTCCTTAACTGATTTTAACCCAGGTACCTGATTTCCCTCTCAGGAGCTCTGGCTATTGTTAATGCAGTACCCT
..................................................(((((....((((((((((.((((......(((..((((((............)))))).)))..................(((((....(((((((...))))))).)))))..))))...)))).))))))....)))))..........................................................
..................................................51...................................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR029124(GSM416753)
HeLa. (hela)		SRR207117(GSM721079)
Whole cell RNA. (cell line)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR191587(GSM715697)
50genomic small RNA (size selected RNA from t. (breast)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		GSM416733(GSM416733)
HEK293. (cell line)		SRR037931(GSM510469)
293GFP. (cell line)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191632(GSM715742)
78genomic small RNA (size selected RNA from t. (breast)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577743(Rovira)
total RNA. (breast)
................................................................................................................................................................................GTTCCTTAACTGATTTTAACCCAG..................................................24134.0034.006.0010.00--------2.002.001.001.001.001.00--1.001.001.001.00--1.00----1.001.001.00---1.001.00
................................................................................................................................................................................GTTCCTTAACTGATTTTAACCCAGA.................................................25126.0034.0022.00-----3.00-----1.00------------------------
.................................................................................................................................................................................TTCCTTAACTGATTTTAACCCAGAA................................................25114.005.00----7.007.00-------------------------------
.................................................................................................................................................................................TTCCTTAACTGATTTTAACCCAGA.................................................2418.005.008.00------------------------------------
.................................................................................................................................................................................TTCCTTAACTGATTTTAACCCAG..................................................2315.005.00-------2.00--------1.00-----1.001.00-------------
....................................................................................................................................................................................CTTAACTGATTTTAACCCAGAA................................................223.000.003.00------------------------------------
..............................................GTAGAGATCTAAGAAGGAATGGCAG...................................................................................................................................................................................2512.002.00--------2.00----------------------------
...............................................................................................................................................................................GGTTCCTTAACTGATTTTAACCCAGG.................................................2612.002.002.00------------------------------------
...............................................................................................................................................................................GGTTCCTTAACTGATTTTAACCCAGA.................................................262.000.002.00------------------------------------
.........................................................................................................................................................................................................................CAGGAGCTCTGGCTATTGTT.............2011.001.00---------------------------------1.00---
..............................................................................................................................................................................TGGTTCCTTAACTGATTTTAACCCAGA.................................................271.000.001.00------------------------------------
..............................................................GAATGGCAGAGATTTAAAGAAAGTAGAGAAG.............................................................................................................................................................3111.001.00----------------------------1.00--------
...........................................................................................................................................................................................................................GGAGCTCTGGCTATTGTTAATGCAGTACC..2911.001.00---------------------------1.00---------
.....................................................TCTAAGAAGGAATGGCAGAGATTTAAAGAAAGTAGA.................................................................................................................................................................3611.001.00----------------------------------1.00--
................................................................................................................................................................................GTTCCTTAACTGATTTTAACCCAGAG................................................2611.0034.00-----------------1.00-------------------
.....................................................................................................................................................................................................................CTCTCAGGAGCTCTGGCTATT................2111.001.00--------------------------------1.00----
........................................................AAGAAGGAATGGCAGAAGAG..............................................................................................................................................................................201.000.00--------------------------1.00----------
......................................................................................................................................................................................................................TCTCAGGAGCTCTGGCTAT.................1911.001.001.00------------------------------------
.................................................................................................................................................................................TTCCTTAACTGATTTTAACCCAGG.................................................2411.001.00-1.00-----------------------------------
...........................................GTAGTAGAGATCTAAGAAGGAATGG......................................................................................................................................................................................2511.001.00-------------------------1.00-----------

Antisense strand
AAGGTTTTTGAACTTTGAAATAATATAAACTCATTTTTTTTAAGTAGTAGAGATCTAAGAAGGAATGGCAGAGATTTAAAGAAAGTAGAGAAGTCAAGTGTAATCTCTAATTCAGTCACAGTAAAATATCTTCTGACTCATAGAAATATGGTTTCTACTCAGACCTCTCACAGTTGGTTCCTTAACTGATTTTAACCCAGGTACCTGATTTCCCTCTCAGGAGCTCTGGCTATTGTTAATGCAGTACCCT
..................................................(((((....((((((((((.((((......(((..((((((............)))))).)))..................(((((....(((((((...))))))).)))))..))))...)))).))))))....)))))..........................................................
..................................................51...................................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR029124(GSM416753)
HeLa. (hela)		SRR207117(GSM721079)
Whole cell RNA. (cell line)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR191587(GSM715697)
50genomic small RNA (size selected RNA from t. (breast)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		GSM416733(GSM416733)
HEK293. (cell line)		SRR037931(GSM510469)
293GFP. (cell line)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191632(GSM715742)
78genomic small RNA (size selected RNA from t. (breast)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577743(Rovira)
total RNA. (breast)
................................................................................................................................................AATATGGTTTCTACTATC........................................................................................ 189.000.00--9.00----------------------------------
...............................................................................................................................................AGTAGAAACCATATTT........................................................................................... 1607.007.00---7.00---------------------------------