ID: uc004czq.1_intron_11_0_chrX_20071107_r.3p
GENE: (2)
chrX:20071057-20071306-


(1)
AGO2.ip 		(14)
BRAIN 		(15)
BREAST 		(4)
CELL-LINE 		(2)
CERVIX 		(1)
FIBROBLAST 		(9)
LIVER 		(2)
OTHER 		(2)
SKIN 		(4)
UTERUS

Sense strand
TGCTGCAGACCAAGGGCTGCTGTAGCCTGGTCATTTCTAGAGTAGGATAATGAGATGCCAGGATGATGAAAGCAGAGCATGCTGTGCCACAGCATTTAGGAGGTGCGTGGATGAGGACAGGAAGGACACTTCGGGATATGTGTTTCTTGGTTCTACAGTAGTGTGATGAATACCAATGTCTTTAATGCATTTCTCTGCAGCATGTGACAAACTTTCAACATCAACTATGAGTTTGCCAAAGCCAACGGAG
..........................................................................................................(((((......(((((((.(((..........))).)))))))..)))))....((((.....)))).............................................................................
..........................................................................................................107...................................................................177.......................................................................
SizePerfect hitTotal NormPerfect NormTAX577744(Rovira)
total RNA. (breast)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577743(Rovira)
total RNA. (breast)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577589(Rovira)
total RNA. (breast)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		TAX577580(Rovira)
total RNA. (breast)		SRR189782TAX577739(Rovira)
total RNA. (breast)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		TAX577741(Rovira)
total RNA. (breast)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040042(GSM532927)
G428N. (cervix)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577746(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		TAX577588(Rovira)
total RNA. (breast)		SRR189787TAX577453(Rovira)
total RNA. (breast)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		TAX577740(Rovira)
total RNA. (breast)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577742(Rovira)
total RNA. (breast)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR191431(GSM715541)
168genomic small RNA (size selected RNA from . (breast)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040043(GSM532928)
G428T. (cervix)		TAX577738(Rovira)
total RNA. (breast)		TAX577745(Rovira)
total RNA. (breast)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
.........................................................................................................................................................TACAGTAGTGTGATGACTGA.............................................................................20109.000.007.004.0010.0014.00-10.003.004.008.003.004.003.00-3.001.001.002.003.004.003.00-1.003.001.002.00-3.003.001.002.001.00--1.00-2.00-1.00-1.00-------------
.........................................................................................................................................................TACAGTAGTGTGATGACT...............................................................................1854.000.001.0012.00--15.00--1.00--2.00-7.003.002.006.00-----1.00---2.00--1.00--------------------1.00---
.........................................................................................................................................................TACAGTAGTGTGATGACTGG.............................................................................2023.000.002.00-4.002.00-3.00--2.004.00------1.001.00--1.00-----1.00---2.00----------------------
.........................................................................................................................................................TACAGTAGTGTGATGAATGAA............................................................................21120.0019.003.003.00-----1.00--5.00--1.003.00--1.001.00---1.00----------------------------1.00-
.........................................................................................................................................................TACAGTAGTGTGATGAAT...............................................................................18119.0019.00-3.00--7.00-------3.00-2.002.00-----1.00---1.00---------------------------
.........................................................................................................................................................TACAGTAGTGTGATGAATGA.............................................................................20115.0019.002.00-1.001.00--2.002.001.00-1.002.00------1.001.00----1.00----------------------------
.........................................................................................................................................................TACAGTAGTGTGATGACTG..............................................................................1913.000.002.00-1.002.00-2.001.00--2.00-2.00-----------1.00-----------------------------
.........................................................................................................................................................TACAGTAGTGTGATGACTGT.............................................................................208.000.003.00----------1.00-----1.00-----------1.00--1.00-------1.00------------
.........................................................................................................................................................TACAGTAGTGTGATGAGTGA.............................................................................208.000.00-1.00----1.001.00-1.00----------1.00---1.001.00--------1.00------------------
.........................................................................................................................................................TACAGTAGTGTGATGAATGAAT...........................................................................2217.0019.005.00-1.00---------------------------------1.00----------------
.........................................................................................................................................................TACAGTAGTGTGATGAATGGAT...........................................................................2216.0019.00------2.00---------1.001.00-1.00------------------------------1.00--
.........................................................................................................................................................TACAGTAGTGTGATGACTAA.............................................................................206.000.00--1.00--1.00----1.00---------1.00------1.00----1.00--------------------
.........................................................................................................................................................TACAGTAGTGTGATGACTAG.............................................................................205.000.00--1.001.00--1.00-1.00-------1.00------------------------------------
.........................................................................................................................................................TACAGTAGTGTGATGAATGG.............................................................................2015.0019.00--1.00--1.001.00----1.00----1.00------------------------------------
.........................................................................................................................................................TACAGTAGTGTGATGATTGA.............................................................................204.000.00-1.00-----2.00-----1.00---------------------------------------
.........................................................................................................................................................TACAGTAGTGTGATGATT...............................................................................184.000.00-2.00--1.00----------------1.00-------------------------------
.........................................................................................................................................................TACAGTAGTGTGATGAATGGA............................................................................2114.0019.00--1.001.00-------------1.00--1.00--------------------------------
.........................................................................................................................................................TACAGTAGTGTGATGAATGAAG...........................................................................2213.0019.00-1.00---1.00---1.00-------------------------------------------
.........................................................................................................................................................TACAGTAGTGTGATGAATGAAA...........................................................................2213.0019.00-------1.00----------------------------1.00-----------1.00----
.........................................................................................................................................................TACAGTAGTGTGATGATTGG.............................................................................203.000.00-------1.00-----1.00-----1.00---------------------------------
.........................................................................................................................................................TACAGTAGTGTGATGAATGTAT...........................................................................2213.0019.003.00----------------------------------------------------
.........................................................................................................................................................TACAGTAGTGTGATGAGTGG.............................................................................203.000.001.00--1.00----------------------------------------1.00--------
.........................................................................................................................................................TACAGTAGTGTGATGAATGATT...........................................................................2212.0019.00------2.00----------------------------------------------
...............................................................................................................TGAGGACAGGAAGGACACTCGGG....................................................................................................................232.000.00-------------------------------2.00---------------------
.........................................................................................................................................................TACAGTAGTGTGATGAATGTT............................................................................2112.0019.00--1.00---1.00----------------------------------------------
.........................................................................................................................................................TACAGTAGTGTGATGACTTA.............................................................................202.000.00--1.00------------------1.00-------------------------------
.........................................................................................................................................................TACAGTAGTGTGATGAATGAT............................................................................2112.0019.00--1.00-------------1.00------------------------------------
.........................................................................................................................................................TACAGTAGTGTGATGAGT...............................................................................182.000.00-1.00-----------1.00---------------------------------------
.........................................................................................................................................................TACAGTAGTGTGATGAATGGAA...........................................................................2212.0019.00--1.00----1.00---------------------------------------------
.........................................................................................................................................................TACAGTAGTGTGATGAATAATT...........................................................................222.000.00--------------------------------1.00--------------1.00-----
.........................................................................................................................................................TACAGTAGTGTGATGAATGGT............................................................................2112.0019.001.00-------------------------------------1.00--------------
.........................................................................................................................................................TACAGTAGTGTGATGAATAAAT...........................................................................222.000.001.00-----------------1.00----------------------------------
.........................................................................................................................................................TACAGTAGTGTGATGACCGA.............................................................................202.000.00--1.00------1.00-------------------------------------------
.........................................................................................................................................................TACAGTAGTGTGATGAATATAG...........................................................................221.000.001.00----------------------------------------------------
.........................................................................................................................................................TACAGTAGTGTGATGACGG..............................................................................191.000.00-----------1.00-----------------------------------------
........................................................................................................................................................CTACAGTAGTGTGATAACT...............................................................................191.000.00--------------1.00--------------------------------------
.........................................................................................................................................................TACAGTAGTGTGATGAATGATA...........................................................................2211.0019.00------------------1.00----------------------------------
.........................................................................................................................................................TACAGTAGTGTGATGAATGTA............................................................................2111.0019.00----------------1.00------------------------------------
.........................................................................................................................................................TACAGTAGTGTGATGAATGTTA...........................................................................2211.0019.001.00----------------------------------------------------
.........................................................................................................................................................TACAGTAGTGTGATGGAT...............................................................................181.000.00-1.00---------------------------------------------------
.........................................................................................................................................................TACAGTAGTGTGATGAATGTGA...........................................................................2211.0019.00--------------1.00--------------------------------------
.........................................................................................................................................................TACAGTAGTGTGATGAATGGTT...........................................................................2211.0019.00-----------------------------------------1.00-----------
.........................................................................................................................................................TACAGTAGTGTGATGAAGGAA............................................................................211.000.00----------------1.00------------------------------------
.........................................................................................................................................................TACAGTAGTGTGATGACTCA.............................................................................201.000.00-----------------------1.00-----------------------------
.........................................................................................................................................................TACAGTAGTGTGATGAATATAA...........................................................................221.000.00--1.00--------------------------------------------------
.........................................................................................................................................................TACAGTAGTGTGATGAGTTC.............................................................................201.000.00--------------------1.00--------------------------------
.........................................................................................................................................................TACAGTAGTGTGATGACTAT.............................................................................201.000.00--1.00--------------------------------------------------
.........................................................................................................................................................TACAGTAGTGTGATGAATAA.............................................................................201.000.00-------------------------------------1.00---------------
.........................................................................................................................................................TACAGTAGTGTGATGAATAAT............................................................................211.000.00---------1.00-------------------------------------------
.........................................................................................................................................................TACAGTAGTGTGATGAATGATG...........................................................................2211.0019.00--------1.00--------------------------------------------
.........................................................................................................................................................TACAGTAGTGTGATGAATAGA............................................................................211.000.00---------1.00-------------------------------------------
........................................................................................................................................................CTACAGTAGTGTGATGACTGA.............................................................................211.000.00---------------------------------1.00-------------------
.........................................................................................................................................................TACAGTAGTGTGATGAATGGTA...........................................................................2211.0019.00-------------------1.00---------------------------------
.........................................................................................................................................................TACAGTAGTGTGATGAAAAAA............................................................................211.000.00----------------------------1.00------------------------
.........................................................................................................................................................TACAGTAGTGTGATGACCGG.............................................................................201.000.00---1.00-------------------------------------------------
.........................................................................................................................................................TACAGTAGTGTGATGAGTGT.............................................................................201.000.001.00----------------------------------------------------
..........................................................................................................................................TGTGTTTCTTGGTTCTGGCT............................................................................................201.000.00-------------------------------1.00---------------------
.........................................................................................................................................................TACAGTAGTGTGATGAGTG..............................................................................191.000.00-----------1.00-----------------------------------------
.........................................................................................................................................................TACAGTAGTGTGATGAATGACT...........................................................................2211.0019.00-----------1.00-----------------------------------------
.........................................................................................................................................................TACAGTAGTGTGATGATTGT.............................................................................201.000.00------1.00----------------------------------------------
.........................................................................................................................................................TACAGTAGTGTGATGAATAGAA...........................................................................221.000.00---1.00-------------------------------------------------
.........................................................................................................................................................TACAGTAGTGTGATGATTG..............................................................................191.000.00------------1.00----------------------------------------
.........................................................................................................................................................TACAGTAGTGTGATGAATG..............................................................................1911.0019.00-----------------------1.00-----------------------------
.........................................................................................................................................................TACAGTAGTGTGATGAATAAAAA..........................................................................231.000.00--------1.00--------------------------------------------
.........................................................................................................................................................TACAGTAGTGTGATGACCAA.............................................................................201.000.00-------------------1.00---------------------------------
.........................................................................................................................................................TACAGTAGTGTGATGAATAAA............................................................................211.000.00-----1.00-----------------------------------------------
...........................................................................................................TGGATGAGGACAGGAAGGA............................................................................................................................1930.670.67----------------------------------------------0.67------
............................................................................................................GGATGAGGACAGGAAGGAC...........................................................................................................................1930.330.33--------------------0.33--------------------------------
............................................................................................................GGATGAGGACAGGAAGGA............................................................................................................................1830.330.33----------------------------------------------0.33------

Antisense strand
TGCTGCAGACCAAGGGCTGCTGTAGCCTGGTCATTTCTAGAGTAGGATAATGAGATGCCAGGATGATGAAAGCAGAGCATGCTGTGCCACAGCATTTAGGAGGTGCGTGGATGAGGACAGGAAGGACACTTCGGGATATGTGTTTCTTGGTTCTACAGTAGTGTGATGAATACCAATGTCTTTAATGCATTTCTCTGCAGCATGTGACAAACTTTCAACATCAACTATGAGTTTGCCAAAGCCAACGGAG
..........................................................................................................(((((......(((((((.(((..........))).)))))))..)))))....((((.....)))).............................................................................
..........................................................................................................107...................................................................177.......................................................................
SizePerfect hitTotal NormPerfect NormTAX577744(Rovira)
total RNA. (breast)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577743(Rovira)
total RNA. (breast)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577589(Rovira)
total RNA. (breast)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		TAX577580(Rovira)
total RNA. (breast)		SRR189782TAX577739(Rovira)
total RNA. (breast)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		TAX577741(Rovira)
total RNA. (breast)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040042(GSM532927)
G428N. (cervix)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577746(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		TAX577588(Rovira)
total RNA. (breast)		SRR189787TAX577453(Rovira)
total RNA. (breast)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		TAX577740(Rovira)
total RNA. (breast)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577742(Rovira)
total RNA. (breast)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR191431(GSM715541)
168genomic small RNA (size selected RNA from . (breast)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040043(GSM532928)
G428T. (cervix)		TAX577738(Rovira)
total RNA. (breast)		TAX577745(Rovira)
total RNA. (breast)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
...........................................................................................................TGGATGAGGACAGGAGAGG............................................................................................................................ 191.000.00------------------------------------------1.00----------
......................................AGAGTAGGATAATGAGAGT................................................................................................................................................................................................. 191.000.00----------------------------------------------------1.00
...................CTGTAGCCTGGTCATGATT.................................................................................................................................................................................................................... 191.000.00----------------------------------1.00------------------
.........................................TCCTGGCATCTCATTATCCTAC........................................................................................................................................................................................... 2211.001.00---------------------------------------------1.00-------
....................................................................................................................................................GGTTCTACAGTAGTGCTG.................................................................................... 181.000.00-------------------------------------------1.00---------