| (1) AGO2.ip | (4) B-CELL | (1) BRAIN | (3) BREAST | (17) CELL-LINE | (2) CERVIX | (2) HEART | (7) HELA | (4) OTHER | (8) SKIN | (2) XRN.ip |
| TAAAATTAAAACTCCATACCTTCGAATCTCATAAAGATGAAATTTTCCAGGTATGTGACAGTTTTCTGGTGTCTGTATGTCAGGAAATGAAATCCAGGGATTCATCAGTTAAGCTATACCAGACTCGTGGGTCCACTATTGAAAAAAATGTCTTGTACGTGGTGTTACATGGAGATGCTCATAGGGTAAGGTACACCTTGTTGAAGAATTAAAAAGCTTCTGGGATGGTTATGGGGTCGAATAAATTTATTGAGATCCCAGGCTGAGTTCCTCAGTGCTGGGGAGTGCAGCCTTCCTGAGGACAGGATGGAGCTGAGCCCTTGCAGAGCACTTGAAAGTCGGGGACAAGAGAGTGAGGCCATCAGGCCAAGGATAAGATAATAGAGTGCAAGATGGGAAAATATCAGATTAGAACAACAGCCACAAACCTAGCAGCGGATGATTCTTTAAATACATTTTCAAAATTATCTATTACTAGGTCCACTGGTCTCCACATAATGAAACTATTCTGGCTTCAAGTGGTACTGA ..........................................................................................................................................................................................................................((((.((.((((..((((((.((((....))))..)))))).(((((..(((((((....)))))))..))))).(((((....)))))........)))).)).)))).(((((....(((...)))....))))).((((....))))................................................................................................................................................................ .............................................................................................................................................................................................................206..................................................................................................................................................................................387........................................................................................................................................... | Size | Perfect hit | Total Norm | Perfect Norm | DRR001486(DRX001040) "Hela long cytoplasmic cell fraction, LNA(+)". (hela) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | DRR001485(DRX001039) "Hela long total cell fraction, LNA(+)". (hela) | SRR314796(SRX084354) "Total RNA, fractionated (15-30nt)". (cell line) | SRR037943(GSM510481) 293DcrTN. (cell line) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR342899(SRX096795) small RNA seq of Left atrial tissue. (heart) | SRR343334 | SRR189782 | SRR037944(GSM510482) 293DcrTN_cand5. (cell line) | RoviraIPAgo2(Rovira) total RNA. (ago2 breast) | SRR207110(GSM721072) Nuclear RNA. (cell line) | SRR015360(GSM380325) Plasma B cells (PC137). (B cell) | SRR207116(GSM721078) Nuclear RNA. (cell line) | SRR033712(GSM497057) Burkitt Lymphoma (BL510). (B cell) | SRR029124(GSM416753) HeLa. (hela) | SRR342894(SRX096790) small RNA seq of Right atrial tissue. (heart) | SRR033732(GSM497077) bjab cell line (bjab103). (B cell) | GSM359178(GSM359178) hela_nucl_t. (hela) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR343335 | SRR060168(GSM565978) 5-8F_nucleus. (cell line) | DRR001482(DRX001036) "Hela long total cell fraction, control". (hela) | GSM359173(GSM359173) hela_10_1. (hela) | SRR037936(GSM510474) 293cand1. (cell line) | SRR060983(GSM569187) Human pre-germinal center B cell [09-001]. (cell line) | SRR330906(SRX091744) tissue: normal skindisease state: normal. (skin) | SRR040028(GSM532913) G026N. (cervix) | SRR191606(GSM715716) 84genomic small RNA (size selected RNA from t. (breast) | SRR189785 | SRR039192(GSM494811) K562 cell line is derived from a CML patient . (cell line) | SRR033721(GSM497066) Ly3 cell line (Ly3). (B cell) | SRR040039(GSM532924) G531T. (cervix) | GSM956925F181A(GSM956925) "cell line: HEK293 cell linepassages: 15-20ip. (cell line) | DRR001489(DRX001043) "Hela short nuclear cell fraction, control". (hela) | SRR330902(SRX091740) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR029132(GSM416761) MB-MDA231. (cell line) | SRR107296(GSM677703) 18-30nt fraction of small RNA. (cell line) | GSM450599(GSM450599) miRNA sequencing raw reads from post-mortem s. (brain) | SRR191585(GSM715695) 196genomic small RNA (size selected RNA from . (breast) | SRR330893(SRX091731) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR326280(GSM769510) total cell content of unperturbed cells was s. (cell line) | SRR330886(SRX091724) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR207119(GSM721081) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR330859(SRX091697) tissue: skin psoriatic involveddisease state:. (skin) | SRR330896(SRX091734) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330891(SRX091729) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330869(SRX091707) tissue: skin psoriatic involveddisease state:. (skin) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .................................................................................................................................................................................................................................................................................................................................................................................................................TATCAGATTAGAACAACAGCCACAAACCTAGCAGCGGATGATTCTTTAAATACATTTTCAAAATTATCTATTACTAG.................................................. | 77 | 1 | 25.00 | 25.00 | 25.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................................................................................................................CATCAGGCCAAGGATC......................................................................................................................................................... | 16 | 17.00 | 0.00 | - | - | - | 17.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................................................................................................................................................................................................................................................................ATATCAGATTAGAACAACAGCCACAAACCTAGCAGCGGATGATTCTTTAAATACATTTTCAAAATTATCTATTACTAG.................................................. | 78 | 1 | 12.00 | 12.00 | - | - | 12.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................................................................................................................AGGCCAAGGATAAGATAATA................................................................................................................................................. | 20 | 1 | 10.00 | 10.00 | - | - | - | - | 10.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGATTAGAACAACAGCCACAAACCTAGCAGCGGATGATTCTTTAAATACATTTTCAAAATTATCTATTACTA................................................... | 75 | 1 | 9.00 | 9.00 | - | - | 9.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................................................................................................................................................................................................AAAATATCAGATTAGAACAACAGCCACAAAC.................................................................................................... | 31 | 1 | 4.00 | 4.00 | - | - | - | - | - | - | - | - | - | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................................................................................................GACAGGATGGAGCTGAGCCCTTGCAGAGCAC..................................................................................................................................................................................................... | 31 | 1 | 4.00 | 4.00 | - | 3.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................AAAAAGCTTCTGGGATAAG........................................................................................................................................................................................................................................................................................................... | 19 | 4.00 | 0.00 | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTCTGGCTTCAAGTGGTAC... | 21 | 1 | 3.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .AAAATTAAAACTCCATACCTTCGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 24 | 1 | 3.00 | 3.00 | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTATTCTGGCTTCAAGTGG...... | 21 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................TACCTTCGAATCTCATAAAGATGAAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 26 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTAGGTCCACTGGTCTCCACATAAGA............................ | 27 | 2.00 | 0.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................................ATGCTCATAGGGTAAGGTACACCTTGTTGAA................................................................................................................................................................................................................................................................................................................................... | 31 | 1 | 2.00 | 2.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................AAAAGCTTCTGGGATGGTTATGGGGCCG................................................................................................................................................................................................................................................................................................. | 28 | 2.00 | 0.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................................................................................................................................................................................................................................................................................................ACAGGATGGAGCTGAGCCCTTGCAGAGCACC.................................................................................................................................................................................................... | 31 | 2.00 | 0.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGAAACTATTCTGGCTTC............ | 20 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGCTTCAAGTGGTACTGA | 20 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................ATTCATCAGTTAAGCTATACCAG...................................................................................................................................................................................................................................................................................................................................................................................................................... | 23 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................................................................................GCACTTGAAAGTCGGGGACA..................................................................................................................................................................................... | 20 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................GTTGAAGAATTAAAAAGCTTCTGGGATGG............................................................................................................................................................................................................................................................................................................ | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................ATGGTTATGGGGTCGGA............................................................................................................................................................................................................................................................................................... | 17 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | |
| ..AAATTAAAACTCCATACCTTCGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................AAAAGCTTCTGGGATGGTTATGGGGTC.................................................................................................................................................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....ATTAAAACTCCATACCTCCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCTGGCTTCAAGTGGTAC... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................................................................................ATGGAGCTGAGCCCTTGCAGAGCACTCGA................................................................................................................................................................................................. | 29 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................................................................................................................................................................................................................................................................................................ACAGGATGGAGCTGAGCCCTTGCAGAGCACCTGA................................................................................................................................................................................................. | 34 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........AACTCCATACCTTCGAATCTCATAAAGATGAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 32 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ..................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGATTAGAACAACAGCCACAAACCTAGCAGCGGATGATTCTTTAAATACATTTTCAAAATTATCTATTACTAG.................................................. | 76 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGGCTTCAAGTGGTACTG. | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................CAGGTATGTGACAGTTTTCTGGTGTCTGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................................................AGGACAGGATGGAGCTGAGCCCTTGCAGAGCAC..................................................................................................................................................................................................... | 33 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................................................................................GATGGAGCTGAGCCCTTGCAGAGCACTT................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAACCTAGCAGCGGATGACTC................................................................................... | 23 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................................................................................................................................................................................................................................................................CTTCCTGAGGACAGGATGGAGCTGA.................................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................................................................GAGGACAGGATGGAGCTGAGCCCTTGCAGAGCACT.................................................................................................................................................................................................... | 35 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................................................................CTGGGGAGTGCAGCCTTCCTGAGGACAGGA............................................................................................................................................................................................................................. | 30 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................................................................................ATGGAGCTGAGCCCTTGCAGAGCACCTG.................................................................................................................................................................................................. | 28 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................AAGCTATACCAGACTCGTGGGTCCACTGA..................................................................................................................................................................................................................................................................................................................................................................................................... | 29 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....ATTAAAACTCCATACCTTCG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................AGCTATACCAGACTCGTGGGTCCAC........................................................................................................................................................................................................................................................................................................................................................................................................ | 25 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................................................................................................GACAGGATGGAGCTGAGCCCTTGCAGAGCACCTG.................................................................................................................................................................................................. | 34 | 1 | 1.00 | 4.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................................GAGTGCAGCCTTCCTGAGGACAA............................................................................................................................................................................................................................... | 23 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................................................................................................................................................................................................................................................................................................ACAGGATGGAGCTGAGCCCT............................................................................................................................................................................................................... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................TTGAGATCCCAGGCTGAGTTCCTC............................................................................................................................................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................................................................................................ACAGGATGGAGCTGACC.................................................................................................................................................................................................................. | 17 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTCCACTGGTCTCCACAT................................ | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................................................................................................................GTCGGGGACAAGAGAGTGAGGCCATCA.................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ..........................TCTCATAAAGATGAAATTTTCCAGGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCTTCAAGTGGTACTGAAA | 21 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAAGTGGTACTGAATAG | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................................................................................................................................................................................................................................................GAGGACAGGATGGAGCTGAGCCCTTGCAGAGCAC..................................................................................................................................................................................................... | 34 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................CGAATCTCATAAAGATGAAATTTTCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATAATGAAACTATTCTGGCTTCAAGT........ | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTATTCTGGCTTCAAGTGGTACTG. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................AATCTCATAAAGATGAAATTTTCCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................................GTTATGGGGTCGAATAAATT......................................................................................................................................................................................................................................................................................... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ..........................................................................................................................................................................................................................................................................................................AGGACAGGATGGAGCTGAGCCCTTGCAGAGCACC.................................................................................................................................................................................................... | 34 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................................................................................................................................................................TAAGATAATAGAGTGCAAGA....................................................................................................................................... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................................................AGGACAGGATGGAGCTGAGC.................................................................................................................................................................................................................. | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTATTCTGGCTTCAAGTGGTACTG. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................................................................................................................TGGAGCTGAGCCCTTGCAGAGCACG.................................................................................................................................................................................................... | 25 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................................................................................................................................................................................................................................................GACAGGATGGAGCTGAGCC................................................................................................................................................................................................................. | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACTATTCTGGCTTCAAGTGGGAC... | 25 | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................................................................................................................................................................................................................................................................................................ACAGGATGGAGCTGAGCCCTTGCAGAGCACT.................................................................................................................................................................................................... | 31 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCTCCACATAATGAAA......................... | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................................................................................................................................................CGGGGACAAGAGAGTGAGG.......................................................................................................................................................................... | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................TTGAGATCCCAGGCTGAGTTCCT................................................................................................................................................................................................................................................................ | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................................................................................................ACAGGATGGAGCTGAGCCCCTGC............................................................................................................................................................................................................ | 23 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................................................................................................................TGAGATCCCAGGCTGA...................................................................................................................................................................................................................................................................... | 16 | 4 | 0.25 | 0.25 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.25 | - |
| TAAAATTAAAACTCCATACCTTCGAATCTCATAAAGATGAAATTTTCCAGGTATGTGACAGTTTTCTGGTGTCTGTATGTCAGGAAATGAAATCCAGGGATTCATCAGTTAAGCTATACCAGACTCGTGGGTCCACTATTGAAAAAAATGTCTTGTACGTGGTGTTACATGGAGATGCTCATAGGGTAAGGTACACCTTGTTGAAGAATTAAAAAGCTTCTGGGATGGTTATGGGGTCGAATAAATTTATTGAGATCCCAGGCTGAGTTCCTCAGTGCTGGGGAGTGCAGCCTTCCTGAGGACAGGATGGAGCTGAGCCCTTGCAGAGCACTTGAAAGTCGGGGACAAGAGAGTGAGGCCATCAGGCCAAGGATAAGATAATAGAGTGCAAGATGGGAAAATATCAGATTAGAACAACAGCCACAAACCTAGCAGCGGATGATTCTTTAAATACATTTTCAAAATTATCTATTACTAGGTCCACTGGTCTCCACATAATGAAACTATTCTGGCTTCAAGTGGTACTGA ..........................................................................................................................................................................................................................((((.((.((((..((((((.((((....))))..)))))).(((((..(((((((....)))))))..))))).(((((....)))))........)))).)).)))).(((((....(((...)))....))))).((((....))))................................................................................................................................................................ .............................................................................................................................................................................................................206..................................................................................................................................................................................387........................................................................................................................................... | Size | Perfect hit | Total Norm | Perfect Norm | DRR001486(DRX001040) "Hela long cytoplasmic cell fraction, LNA(+)". (hela) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | DRR001485(DRX001039) "Hela long total cell fraction, LNA(+)". (hela) | SRR314796(SRX084354) "Total RNA, fractionated (15-30nt)". (cell line) | SRR037943(GSM510481) 293DcrTN. (cell line) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR342899(SRX096795) small RNA seq of Left atrial tissue. (heart) | SRR343334 | SRR189782 | SRR037944(GSM510482) 293DcrTN_cand5. (cell line) | RoviraIPAgo2(Rovira) total RNA. (ago2 breast) | SRR207110(GSM721072) Nuclear RNA. (cell line) | SRR015360(GSM380325) Plasma B cells (PC137). (B cell) | SRR207116(GSM721078) Nuclear RNA. (cell line) | SRR033712(GSM497057) Burkitt Lymphoma (BL510). (B cell) | SRR029124(GSM416753) HeLa. (hela) | SRR342894(SRX096790) small RNA seq of Right atrial tissue. (heart) | SRR033732(GSM497077) bjab cell line (bjab103). (B cell) | GSM359178(GSM359178) hela_nucl_t. (hela) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR343335 | SRR060168(GSM565978) 5-8F_nucleus. (cell line) | DRR001482(DRX001036) "Hela long total cell fraction, control". (hela) | GSM359173(GSM359173) hela_10_1. (hela) | SRR037936(GSM510474) 293cand1. (cell line) | SRR060983(GSM569187) Human pre-germinal center B cell [09-001]. (cell line) | SRR330906(SRX091744) tissue: normal skindisease state: normal. (skin) | SRR040028(GSM532913) G026N. (cervix) | SRR191606(GSM715716) 84genomic small RNA (size selected RNA from t. (breast) | SRR189785 | SRR039192(GSM494811) K562 cell line is derived from a CML patient . (cell line) | SRR033721(GSM497066) Ly3 cell line (Ly3). (B cell) | SRR040039(GSM532924) G531T. (cervix) | GSM956925F181A(GSM956925) "cell line: HEK293 cell linepassages: 15-20ip. (cell line) | DRR001489(DRX001043) "Hela short nuclear cell fraction, control". (hela) | SRR330902(SRX091740) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR029132(GSM416761) MB-MDA231. (cell line) | SRR107296(GSM677703) 18-30nt fraction of small RNA. (cell line) | GSM450599(GSM450599) miRNA sequencing raw reads from post-mortem s. (brain) | SRR191585(GSM715695) 196genomic small RNA (size selected RNA from . (breast) | SRR330893(SRX091731) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR326280(GSM769510) total cell content of unperturbed cells was s. (cell line) | SRR330886(SRX091724) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR207119(GSM721081) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR330859(SRX091697) tissue: skin psoriatic involveddisease state:. (skin) | SRR330896(SRX091734) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330891(SRX091729) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330869(SRX091707) tissue: skin psoriatic involveddisease state:. (skin) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .......................................................................................................................................CTATTGAAAAAAATGGG........................................................................................................................................................................................................................................................................................................................................................................................ | 17 | 3.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................................................................................................................................................................................................................................................................................................CATCAGGCCAAGGATCTTT...................................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................................................ATTAAAAAGCTTCTGATTA.............................................................................................................................................................................................................................................................................................................. | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAGACCAGTGGACC.................................. | 17 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................................................................................................................................................................................CAAACCTAGCAGCGGAAC....................................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................................................................................................................................................................................................................................................................................................................................................................CAAACCTAGCAGCGGACT....................................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | |
| ............................................................................................................................................................................................................................CCCATAACCATCCCA..................................................................................................................................................................................................................................................................................................... | 15 | 3 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.33 | - | - |
| ............................................................................................................................................................................................................................................................................................................................................................................................CATCTTGCACTCTAT..................................................................................................................................... | 15 | 7 | 0.14 | 0.14 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.14 |