ID: uc004cxe.2_intron_1_0_chrX_15768289_f.3p
GENE: (2)
chrX:15782501-15782750+


(2)
AGO1.ip 		(3)
AGO2.ip 		(2)
AGO3.ip 		(9)
B-CELL 		(3)
BRAIN 		(8)
BREAST 		(29)
CELL-LINE 		(1)
FIBROBLAST 		(3)
HEART 		(4)
HELA 		(1)
KIDNEY 		(1)
LIVER 		(3)
OTHER 		(34)
SKIN 		(1)
UTERUS 		(1)
XRN.ip

Sense strand
ACAGGTGTGTACCACCACGCCTGGATAATTTTTTGCATATTTTGTAGAGACAGGGTTTCGCCGTGTTTCCTAGGCTGGTCTCAAACTTCTGGCCTCAAGTGATCCACCCGCCTTGGCCTCCCCAAGTGCTGGGATTATAGGAGTGAGCCACTGCACTCGGTCCAACAGTCTTGATAATAGGCTGACCTGCTTTCTCCTAGTGCATCCACTCTGGGAGAGCGTGGACCTGGTTCCTGGGGGCGATCGCCAG
................................................................................................................................((((((.....(((.((((........)))).)))..((((((.......))))))..........))))))..................................................
...........................................................................................................................124.........................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR189784DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR029129(GSM416758)
SW480. (cell line)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189782SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		TAX577739(Rovira)
total RNA. (breast)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191420(GSM715530)
122genomic small RNA (size selected RNA from . (breast)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR553575(SRX182781)
source: Kidney. (Kidney)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191509(GSM715619)
156genomic small RNA (size selected RNA from . (breast)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191611(GSM715721)
57genomic small RNA (size selected RNA from t. (breast)		SRR191556(GSM715666)
45genomic small RNA (size selected RNA from t. (breast)		GSM956925PAZD5SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		TAX577741(Rovira)
total RNA. (breast)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR029126(GSM416755)
143B. (cell line)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577579(Rovira)
total RNA. (breast)		SRR038857(GSM458540)
D20. (cell line)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033731(GSM497076)
h929 Cell line (h929). (B cell)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR037934(GSM510472)
293cand4_rep3. (cell line)
................................................................................................................................CTGGGATTATAGGAGTGAGCCAAA..................................................................................................24015.005.00--5.00------1.00--1.00-----1.001.00--------1.00-------------1.00---------------1.00----1.00---1.00-----------------------------1.00--
................................................................................................................................CTGGGATTATAGGAGTGAGCCAAT..................................................................................................24014.005.00--1.00--2.00---1.00-1.002.00-------1.00--------1.00----------------------1.00-----------------1.001.00--------------1.001.00------------
................................................................................................................................CTGGGATTATAGGAGTGAGC......................................................................................................20010.0010.00-9.00-----1.00--------------------------------------------------------------------------------------------
.................................................................................................................................TGGGATTATAGGAGTGAGC......................................................................................................1906.006.00-3.00--2.00---------1.00-------------------------------------------------------------------------------------
................................................................................................................................CTGGGATTATAGGAGTGAGCCAAGA.................................................................................................2506.005.00-----1.00----------2.00-------1.00---------1.00--1.00--------------------------------------------------------------
.................................................................................................................................TGGGATTATAGGAGTGAGCCAAA..................................................................................................2306.001.00--1.00------1.00-1.00---------2.00-----------------------------------------------------------------------1.00------
..............................................................................................................................TGCTGGGATTATAGGAGTGAGC......................................................................................................2206.006.00-------1.002.00-----1.00------------2.00------------------------------------------------------------------------
.................................................................................................................................TGGGATTATAGGAGTGAGCCAAGA.................................................................................................2406.001.00-1.00--3.00-------------------------------------------------------1.00-----------------------------1.00---------
................................................................................................................................CTGGGATTATAGGAGTGAGCCA....................................................................................................2205.005.00----2.00---3.00-------------------------------------------------------------------------------------------
..............................................................................................................................TGCTGGGATTATAGGAGTGAAA......................................................................................................2205.003.00----------4.00--------------------------------------------1.00--------------------------------------------
................................................................................................................................CTGGGATTATAGGAGTGAGCCAAAA.................................................................................................2505.005.00---------------3.00-1.00-------------------------------------------------------------------1.00--------------
.................................................................................................................................TGGGATTATAGGAGTGAGCCAAAA.................................................................................................2404.001.00--2.00------1.00----------1.00-------------------------------------------------------------------------------
................................................................................................................................CTGGGATTATAGGAGTGAGCCAAAT.................................................................................................2504.005.00------2.00------------------------2.00--------------------------------------------------------------------
................................................................................................................................CTGGGATTATAGGAGTGAGAAA....................................................................................................2204.001.00------------------------1.00-----------1.00-2.00-------------------------------------------------------------
................................................................................................................................CTGGGATTATAGGAGTGAGCCAATT.................................................................................................2504.005.00--2.00---2.00---------------------------------------------------------------------------------------------
.................................................................................................................................................................................TAGGCTGACCTGCTTTCTCCTAGA.................................................243.000.00-------------2.00-------------------------------------------------------------------1.00------------------
............................................................................................................................AGTGCTGGGATTATAGGAGTGAAA......................................................................................................243.000.00--------------------------------1.00-1.00---------------------------------------------------------1.00-------
..............................................................................................................................TGCTGGGATTATAGGAGTGA........................................................................................................2003.003.00-------------------2.00--------------------------------------------1.00-----------------------------------
..............................................................................................................................TGCTGGGATTATAGGAGTGAGAAA....................................................................................................2403.001.00--------1.00--1.00--------------------------------------------------------------1.00-------------------------
..............................................................................................................................TGCTGGGATTATAGGAGTGAGCAT....................................................................................................2402.006.00-------------------------------------------------------------------------------------------1.00----1.00---
..............................................................................................................................TGCTGGGATTATAGGAGTGAAGA.....................................................................................................2302.003.00----------------------1.00---------------------1.00-------------------------------------------------------
................................................................................................................................CTGGGATTATAGGAGTGAGCCAGAGA................................................................................................2602.005.00-----1.00----------1.00-----------------------------------------------------------------------------------
.............................................................................................................................GTGCTGGGATTATAGGAGTGAAA......................................................................................................232.000.00-----------------2.00----------------------------------------------------------------------------------
................................................................................................................................CTGGGATTATAGGAGTGAGCAAA...................................................................................................2302.0010.00---------------------------------------------------------1.00-1.00----------------------------------------
................................................................................................................................CTGGGATTATAGGAGTGAGCAAG...................................................................................................2302.0010.00---------1.00--------1.00---------------------------------------------------------------------------------
.................................................................................................................................TGGGATTATAGGAGTGAGCCATAT.................................................................................................2402.001.00----------------------1.00-------------1.00---------------------------------------------------------------
...............................................................................................................................GCTGGGATTATAGGAGTGAGCA.....................................................................................................222.000.00-------------------------1.00------1.00-------------------------------------------------------------------
................................................................................................................................CTGGGATTATAGGAGTGAGCCATAT.................................................................................................2502.005.00-----------------------------1.00-----1.00----------------------------------------------------------------
.................................................................................................................................TGGGATTATAGGAGTGAGCCAAAT.................................................................................................2402.001.00---------------------1.00-----------------------1.00------------------------------------------------------
..............................................................................................................................TGCTGGGATTATAGGAGTGAGAAG....................................................................................................2402.001.00-----------------------2.00----------------------------------------------------------------------------
................................................................................................................................CTGGGATTATAGGAGTGAGCCAAAAA................................................................................................2602.005.00-------------------------1.00--1.00-----------------------------------------------------------------------
.................................................................................................................................TGGGATTATAGGAGTGAGCCAGA..................................................................................................2302.001.00------2.00---------------------------------------------------------------------------------------------
................................................................................................................................CTGGGATTATAGGAGTGAGCCAGA..................................................................................................2402.005.00---------------------------------------1.00--------1.00---------------------------------------------------
................................................................................................................................CTGGGATTATAGGAGTGAGTAA....................................................................................................2202.001.00-----------------------------------------------1.00----------------------------1.00-----------------------
..............................................................................................................................TGCTGGGATTATAGGAGTGAGCAGA...................................................................................................2502.006.00---------------------------------------------------------------------1.00-------------------1.00----------
.........................................................................................TGGCCTCAAGTGATCCACCAAA...........................................................................................................................................222.000.00-------1.00--------------1.00-----------------------------------------------------------------------------
.................................................................................................................................TGGGATTATAGGAGTGAGCCAAG..................................................................................................2302.001.00------------------------1.00-----------------------------------------------------1.00---------------------
.....................................TATTTTGTAGAGACAGGGTTTCGCCG...........................................................................................................................................................................................2621.501.501.50---------------------------------------------------------------------------------------------------
................................................................................................................................CTGGGATTATAGGAGTGAGCATG...................................................................................................2301.0010.00-------------1.00--------------------------------------------------------------------------------------
.......................................................................................TCTGGCCTCAAGTGATCCAGCC.............................................................................................................................................221.000.00----------------------------------------------1.00-----------------------------------------------------
................................................................................................................................CTGGGATTATAGGAGTGAGCAGA...................................................................................................2301.0010.00-----------1.00----------------------------------------------------------------------------------------
.......................................................................................................................CCCCAAGTGCTGGGATTATAGGTGC..........................................................................................................251.000.00-----1.00----------------------------------------------------------------------------------------------
..............................................................................................................................TGCTGGGATTATAGGAGTGAGCAAT...................................................................................................2501.006.00--------------------------------------------------1.00-------------------------------------------------
..............................................................................................................................TGCTGGGATTATAGGAGTGAGAA.....................................................................................................2301.001.00-----------------------------------------------------------------------------------------------1.00----
.......................................................................AGGCTGGTCTCAAACTTCTGGC.............................................................................................................................................................2201.001.00-------1.00--------------------------------------------------------------------------------------------
.................................................................................................................................TGGGATTATAGGAGTGAGCCATTTA................................................................................................2501.001.00-------------------------------------------------1.00--------------------------------------------------
................................................................................................................................CTGGGATTATAGGAGTGAGCAAAA..................................................................................................2401.0010.00------------------------------------------------------------------1.00---------------------------------
.................................................................................................................................TGGGATTATAGGAGTGAGAAA....................................................................................................211.000.00------------------------------------------------------1.00---------------------------------------------
..................................................................................................................................GGGATTATAGGAGTGAGC......................................................................................................1801.001.00-1.00--------------------------------------------------------------------------------------------------
................................................................................................................................CTGGGATTATAGGAGTGAGCTAGA..................................................................................................2401.0010.00-----------------------------------------------------------------1.00----------------------------------
......................................ATTTTGTAGAGACAGGGTTTCACTC...........................................................................................................................................................................................251.000.001.00---------------------------------------------------------------------------------------------------
............................................................................................................................AGTGCTGGGATTATAGGAGTGATA......................................................................................................241.000.00------------------------------1.00---------------------------------------------------------------------
.......................................................................AGGCTGGTCTCAAACTTCTGG..............................................................................................................................................................2101.001.00-------1.00--------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................TGGGAGAGCGTGGACCTGGTTC.................2221.001.00--------------------------------------------------------------------------------1.00-------------------
................................................................................................................................CTGGGATTATAGGAGTGAGCAT....................................................................................................2201.0010.00-------------------------------------------------------------1.00--------------------------------------
..................................................................................................................................GGGATTATAGGAGTGAGCTCTG..................................................................................................2201.001.00-----1.00----------------------------------------------------------------------------------------------
................................................................................................................................CTGGGATTATAGGAGTGAG.......................................................................................................1901.001.00--------------1.00-------------------------------------------------------------------------------------
................................................................................................................................CTGGGATTATAGGAGTGAGCCATTT.................................................................................................2501.005.00------------------------------------------------------------------------1.00---------------------------
................................................................................................................................CTGGGATTATAGGAGTGAGCCCAT..................................................................................................241.000.00--1.00-------------------------------------------------------------------------------------------------
................................................................................................................................CTGGGATTATAGGAGTGAGACAA...................................................................................................2301.001.00--------------------------------------------------------------------1.00-------------------------------
................................................................................................................................CTGGGATTATAGGAGTGAGGA.....................................................................................................2101.001.00-----------------------------------------1.00----------------------------------------------------------
................................................................................................................................CTGGGATTATAGGAGTGAGCAAT...................................................................................................2301.0010.00-------------------------------------1.00--------------------------------------------------------------
.........................................................................................................................CCAAGTGCTGGGATTTTGT..............................................................................................................191.000.00--------------------1.00-------------------------------------------------------------------------------
.................................................................................................................................TGGGATTATAGGAGTGAGCCAATT.................................................................................................2401.001.00--1.00-------------------------------------------------------------------------------------------------
..............................................................................................................................TGCTGGGATTATAGGAGTGAAAC.....................................................................................................2301.003.00--------------------------------------------------------------1.00-------------------------------------
................................................................................................................................CTGGGATTATAGGAGTGAGCCATTAT................................................................................................2601.005.00---------------------------------1.00------------------------------------------------------------------
......................................ATTTTGTAGAGACAGGGCCGT...............................................................................................................................................................................................211.000.001.00---------------------------------------------------------------------------------------------------
........................................TTTGTAGAGACAGGGTTTCGCTCAG.........................................................................................................................................................................................251.000.001.00---------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................AGAGCGTGGACCTGGTTCCTGGGGGCGACCG....311.000.001.00---------------------------------------------------------------------------------------------------
..........................................TGTAGAGACAGGGTTTCGCCTTCC........................................................................................................................................................................................241.000.001.00---------------------------------------------------------------------------------------------------
............................................................................................................................AGTGCTGGGATTATAGGAGTTAA.......................................................................................................231.000.00---------------------------------------1.00------------------------------------------------------------
..............................................................................................................................TGCTGGGATTATAGGAGTGAAAA.....................................................................................................2301.003.00--------------------------------------------------------1.00-------------------------------------------
.....................................TATTTTGTAGAGACAGGGTGCTG..............................................................................................................................................................................................231.000.00---1.00------------------------------------------------------------------------------------------------
..........................................................................................................................................AGGAGTGAGCCACTGCACTCAGCA........................................................................................241.000.00---------------------------------------------------------------------------1.00------------------------
.................................................................................................................................TGGGATTATAGGAGTGAGCTAAC..................................................................................................2301.006.00-----------------------1.00----------------------------------------------------------------------------
................................................................................................................................CTGGGATTATAGGAGTGAGCCAAGAA................................................................................................2601.005.00------------------------------1.00---------------------------------------------------------------------
............................................................................................................................AGTGCTGGGATTATAGGAGTGAGCCACTGTTCC.............................................................................................331.000.001.00---------------------------------------------------------------------------------------------------
..........................................TGTAGAGACAGGGTTTCGCTGAG.........................................................................................................................................................................................231.000.00---1.00------------------------------------------------------------------------------------------------
.............................................................................................................................GTGCTGGGATTATAGGAGTGAAGA.....................................................................................................241.000.00-----------------------------------------------------------------------------1.00----------------------
..................................................................................................................................GGGATTATAGGAGTGAGCCA....................................................................................................2001.001.00-------------------------------------------------------------------------1.00--------------------------
......................................ATTTTGTAGAGACAGGGTTTCGCCACG.........................................................................................................................................................................................271.000.001.00---------------------------------------------------------------------------------------------------
................................................................................................................................CTGGGATTATAGGAGTGAGCTAA...................................................................................................2301.0010.00------------------------------------------------------------------------------------1.00---------------
.................................................................................................................................TGGGATTATAGGAGTGAGCCAGAG.................................................................................................2401.001.00----------------------------------------------------------------------------------------------1.00-----
.........................................TTGTAGAGACAGGGTTTCGCCTCT.........................................................................................................................................................................................241.000.00---1.00------------------------------------------------------------------------------------------------
................................................................................................................................CTGGGATTATAGGAGTGAGCCAAAAC................................................................................................2601.005.00---------------------------------1.00------------------------------------------------------------------
.................................................................................................AGTGATCCACCCGCCTTGGCCTCCCTG..............................................................................................................................271.000.00---1.00------------------------------------------------------------------------------------------------
..........................AATTTTTTGCATATTTTTC.............................................................................................................................................................................................................191.000.00----------------------------------------1.00-----------------------------------------------------------
.................................................................................................................................TGGGATTATAGGAGTGAGCCTAT..................................................................................................231.000.00----------------------------------------------------------------------------------1.00-----------------
..............................................................................................................................TGCTGGGATTATAGGAGTGAG.......................................................................................................2101.001.00-----------------------------------------------------1.00----------------------------------------------
.................................................................................................AGTGATCCACCCGCCTTGGCCTCC.................................................................................................................................2401.001.00-------------------------------------------------------------------------------1.00--------------------
............................................................................................................................AGTGCTGGGATTATAGGAGTAAAA......................................................................................................241.000.00-----------------------------------1.00----------------------------------------------------------------
................................................................................................................................CTGGGATTATAGGAGTGAGCCTTTT.................................................................................................251.000.00------------------1.00---------------------------------------------------------------------------------
...................................................................................................................................................................................................................TGGGAGAGCGTGGACCT......................1721.001.00-------------------------------------------1.00--------------------------------------------------------
.................................................................................................................................TGGGATTATAGGAGTGAGCCA....................................................................................................2101.001.00-------1.00--------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................GGGAGAGCGTGGACCTGGTTC.................2120.500.50-------------------------0.50--------------------------------------------------------------------------
.....................................TATTTTGTAGAGACAGGGTTTCGCCGTG.........................................................................................................................................................................................2820.500.500.50---------------------------------------------------------------------------------------------------
......................................................................................................................TCCCCAAGTGCTGGGATTATAGGAG...........................................................................................................2520.500.50-----0.50----------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................TCTGGGAGAGCGTGGACCTGG....................2120.500.50--------------------------------------------------------------------------------------------------0.50-
........................................................................................................................................................................................................................GAGCGTGGACCTGGTTCCTGGGGGCG........2620.500.50-----------------------------------------0.50----------------------------------------------------------
.............................TTTTTGCATATTTTGTAGAGACAGGG...................................................................................................................................................................................................2630.330.330.33---------------------------------------------------------------------------------------------------
................................TTGCATATTTTGTAGAGACAG.....................................................................................................................................................................................................2160.170.17------------------------------------------0.17---------------------------------------------------------

Antisense strand
ACAGGTGTGTACCACCACGCCTGGATAATTTTTTGCATATTTTGTAGAGACAGGGTTTCGCCGTGTTTCCTAGGCTGGTCTCAAACTTCTGGCCTCAAGTGATCCACCCGCCTTGGCCTCCCCAAGTGCTGGGATTATAGGAGTGAGCCACTGCACTCGGTCCAACAGTCTTGATAATAGGCTGACCTGCTTTCTCCTAGTGCATCCACTCTGGGAGAGCGTGGACCTGGTTCCTGGGGGCGATCGCCAG
................................................................................................................................((((((.....(((.((((........)))).)))..((((((.......))))))..........))))))..................................................
...........................................................................................................................124.........................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR189784DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR029129(GSM416758)
SW480. (cell line)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189782SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		TAX577739(Rovira)
total RNA. (breast)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191420(GSM715530)
122genomic small RNA (size selected RNA from . (breast)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR553575(SRX182781)
source: Kidney. (Kidney)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191509(GSM715619)
156genomic small RNA (size selected RNA from . (breast)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191611(GSM715721)
57genomic small RNA (size selected RNA from t. (breast)		SRR191556(GSM715666)
45genomic small RNA (size selected RNA from t. (breast)		GSM956925PAZD5SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		TAX577741(Rovira)
total RNA. (breast)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR029126(GSM416755)
143B. (cell line)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577579(Rovira)
total RNA. (breast)		SRR038857(GSM458540)
D20. (cell line)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033731(GSM497076)
h929 Cell line (h929). (B cell)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR037934(GSM510472)
293cand4_rep3. (cell line)
.......................................................................................................CCACCCGCCTTGGCCTCCCCAAGTGTGG....................................................................................................................... 282.000.00---2.00------------------------------------------------------------------------------------------------
.............................................AGAGACAGGGTTTCGCCGTGTTGCTG................................................................................................................................................................................... 262.000.002.00---------------------------------------------------------------------------------------------------
...........................................GTAGAGACAGGGTTTCGCCGTGTCC...................................................................................................................................................................................... 252.000.00---2.00------------------------------------------------------------------------------------------------
...........................................................................TGGTCTCAAACTTCTGGCCTCA......................................................................................................................................................... 221.000.00----------------------------------------------------------------------------------------1.00-----------
...............................................................................................................................GCTGGGATTATAGGAGTGAGCCACTGTCT.............................................................................................. 291.000.00--------------------------1.00-------------------------------------------------------------------------
............................................................................................CCTCAAGTGATCCACCCGCCTGAGG..................................................................................................................................... 251.000.00---1.00------------------------------------------------------------------------------------------------
......................................................................TAGGCTGGTCTCAAACTTCTGGCCTTCC........................................................................................................................................................ 281.000.001.00---------------------------------------------------------------------------------------------------
...........................................................................TGGTCTCAAACTTCTGGCCTCACTG...................................................................................................................................................... 251.000.001.00---------------------------------------------------------------------------------------------------
........................................................................GGCTGGTCTCAAACTTGAGC.............................................................................................................................................................. 201.000.00---1.00------------------------------------------------------------------------------------------------
.............................................AGAGACAGGGTTTCGCCGTGTTGG..................................................................................................................................................................................... 241.000.00---1.00------------------------------------------------------------------------------------------------
.............................................................................................................GCCTTGGCCTCCCCAAGTGCTCAGG.................................................................................................................... 251.000.001.00---------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................CTCTGGGAGAGCGTGCGG........................ 181.000.00---------------------------------------------------1.00------------------------------------------------
...GGTGTGTACCACCACATG..................................................................................................................................................................................................................................... 181.000.00-----------------------------------------------------------------------------------1.00----------------
..............................................GAGACAGGGTTTCGCCGTCAG....................................................................................................................................................................................... 211.000.001.00---------------------------------------------------------------------------------------------------
.....................................................................................CTTCTGGCCTCAAGTGATCCACCCAGG.......................................................................................................................................... 271.000.001.00---------------------------------------------------------------------------------------------------
.........................................................................................................ACCCGCCTTGGCCTCCCACT............................................................................................................................. 201.000.00--------------------------1.00-------------------------------------------------------------------------
...............................................................................................................................GCTGGGATTATAGGAGTGAGCCACTGTTTG............................................................................................. 301.000.00----------------------------------------1.00-----------------------------------------------------------
...........................................GTAGAGACAGGGTTTCGCCGTTAG....................................................................................................................................................................................... 241.000.001.00---------------------------------------------------------------------------------------------------
...............................................AGACAGGGTTTCGCCGTACAC...................................................................................................................................................................................... 211.000.001.00---------------------------------------------------------------------------------------------------
........................................................................................CTGGCCTCAAGTGATCCACCCGCTCG........................................................................................................................................ 261.000.00---1.00------------------------------------------------------------------------------------------------
...........................................................................................................TATAATCCCAGCACTTGGGGAGGCCAAGGCGG............................................................................................................... 3290.110.11---------------------------------------------------------------------------------------------------0.11