ID: uc004cqf.3_intron_4_0_chrX_2326855_r.5p
GENE: (2)
chrX:2343038-2343287-


(3)
AGO2.ip
(6)
B-CELL
(5)
BRAIN
(2)
BREAST
(17)
CELL-LINE
(1)
CERVIX
(1)
HEART
(1)
HELA
(5)
LIVER
(7)
OTHER
(4)
SKIN

Sense strand
CTATTCTACAGCGAAGCATCTGGCGAGACTTGGCATGCATGTTATCATAGGTGATGACTTTTACAGTTACTTGTGTTTTTTGTTTTTTCGGTTTTTTTTTTTTTCTGAGACAGGATCGCAGTCCGTCAACCCGTGCTGGACTGCAGTGGTGCAATCTTGGCTCACTGCAGCCTCCACCTCCTGGGTTAAAGTGATTCTCCTACCTCAGCCTCCCGAGTAGCTGGGTTTACAGACATGCACCACCACGCCT
........................................................................................(((((((.((((......)))).)))))))(((..((......))..)))................................................................................................................
..............................................................................79.........................................................138..............................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189782SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189784DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR189787DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
GSM956925PAZD5SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR040019(GSM532904)
G701T. (cervix)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR189786SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR343334SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR343335
...................................................................................TTTTTCGGTTTTTTTTTTTTGGC................................................................................................................................................2311.000.008.003.00-----------------------------------------------
.....................................................................................TTTCGGTTTTTTTTTTTTTGGC...............................................................................................................................................228.000.004.004.00-----------------------------------------------
..................................................................................TTTTTTCGGTTTTTTTTTTTTGGC................................................................................................................................................247.000.006.001.00-----------------------------------------------
..................................................................................TTTTTTCGGTTTTTTTTTTTTTGGC...............................................................................................................................................257.000.005.002.00-----------------------------------------------
.....................................................................................TTTCGGTTTTTTTTTTTTGGC................................................................................................................................................216.000.005.001.00-----------------------------------------------
....................................................................................TTTTCGGTTTTTTTTTTTTGGC................................................................................................................................................224.000.004.00------------------------------------------------
.....................................................................................TTTCGGTTTTTTTTTTGGC..................................................................................................................................................194.000.003.001.00-----------------------------------------------
...................................................................................TTTTTCGGTTTTTTTTTTTGGC.................................................................................................................................................224.000.002.002.00-----------------------------------------------
..................................................................................TTTTTTCGGTTTTTTTTTTTGGC.................................................................................................................................................234.000.003.001.00-----------------------------------------------
.....................................................................................TTTCGGTTTTTTTTTTTTTCTTGGC............................................................................................................................................253.000.003.00------------------------------------------------
.......................................................................................TCGGTTTTTTTTTTTTTCTTTTA............................................................................................................................................233.000.002.001.00-----------------------------------------------
..................................................................................TTTTTTCGGTTTTTTTTTTTGGCT................................................................................................................................................243.000.003.00------------------------------------------------
...................................................................................................................TCGCAGTCCGTCAACAGCG....................................................................................................................193.000.00--3.00----------------------------------------------
.............................................................................................................................................................TGGCTCACTGCAGCCTCCACCTCCGGGC.................................................................283.000.003.00------------------------------------------------
......................................................................................TTCGGTTTTTTTTTTTTTGGC...............................................................................................................................................213.000.00-3.00-----------------------------------------------
....................................................................................TTTTCGGTTTTTTTTTTTTTGGC...............................................................................................................................................232.000.002.00------------------------------------------------
..................................................................................TTTTTTCGGTTTTTTTTTTTTTGGCT..............................................................................................................................................262.000.001.001.00-----------------------------------------------
..................................................................................TTTTTTCGGTTTTTTTTTTGGC..................................................................................................................................................222.000.002.00------------------------------------------------
............................................................................................................................................................................................AAGTGATTCTCCTACCTCAGCCCCTA....................................262.000.002.00------------------------------------------------
...................................................................................................................TCGCAGTCCGTCAACTTCG....................................................................................................................192.000.00--2.00----------------------------------------------
..........................................................................................GTTTTTTTTTTTTTCTGAGACT..........................................................................................................................................222.000.00-2.00-----------------------------------------------
.....................................................................................TTTCGGTTTTTTTTTTTGGC.................................................................................................................................................202.000.001.001.00-----------------------------------------------
....................................................................................TTTTCGGTTTTTTTTTTTTGGCT...............................................................................................................................................232.000.002.00------------------------------------------------
..................................................................................TTTTTTCGGTTTTTTTTTTTTTGG................................................................................................................................................242.000.002.00------------------------------------------------
.....................................................................................TTTCGGTTTTTTTTTTTTTGGCT..............................................................................................................................................232.000.002.00------------------------------------------------
.............................................................................TTTTGTTTTTTCGGTTTTTTTGTC.....................................................................................................................................................242.000.00-2.00-----------------------------------------------
.....................................................................................TTTCGGTTTTTTTTTTTTTCTGGC.............................................................................................................................................2422.000.502.00------------------------------------------------
....................................................................................TTTTCGGTTTTTTTTTTTGGC.................................................................................................................................................212.000.001.001.00-----------------------------------------------
..................................................................................TTTTTTCGGTTTTTTTTTTTGG..................................................................................................................................................222.000.002.00------------------------------------------------
...................................................................................TTTTTCGGTTTTTTTTTTTTCCTC...............................................................................................................................................242.000.001.001.00-----------------------------------------------
..................................................................................TTTTTTCGGTTTTTTTTTTTTGG.................................................................................................................................................232.000.001.001.00-----------------------------------------------
.............AAGCATCTGGCGAGACTTGGCATG.....................................................................................................................................................................................................................2421.501.50------0.501.00-----------------------------------------
...........................................................................................................................CGTCAACCCGTGCTGGCCTC...........................................................................................................201.000.00--1.00----------------------------------------------
.................................................................................................................................................................................................ATTCTCCTACCTCAGCCTCCCGAGTAGGGGA..........................311.000.001.00------------------------------------------------
...................................................................................TTTTTCGGTTTTTTTTTTTTCTTT...............................................................................................................................................241.000.001.00------------------------------------------------
...................................................................................TTTTTCGGTTTTTTTTTTTTTCCTTT.............................................................................................................................................261.000.001.00------------------------------------------------
.......................................................................................TCGGTTTTTTTTTTTTTCCGGC.............................................................................................................................................221.000.001.00------------------------------------------------
.............AAGCATCTGGCGAGACTTG..........................................................................................................................................................................................................................1921.001.00------------1.00------------------------------------
.....................................................................................TTTCGGTTTTTTTTTTTTTGGG...............................................................................................................................................221.000.00-1.00-----------------------------------------------
......................................................................................TTCGGTTTTTTTTTTTTGGGG...............................................................................................................................................211.000.001.00------------------------------------------------
.......................................................................................TCGGTTTTTTTTTTTTGGC................................................................................................................................................191.000.00-1.00-----------------------------------------------
...................................................................................TTTTTCGGTTTTTTTTTTTTGGCT...............................................................................................................................................241.000.001.00------------------------------------------------
.........................................................................................................................................................ATCTTGGCTCACTGCAGCCTCCACCTCGGAT..................................................................311.000.001.00------------------------------------------------
.....................................................................................TTTCGGTTTTTTTTTTTTCGGC...............................................................................................................................................221.000.00-1.00-----------------------------------------------
........................................................................................................................................TGGACTGCAGTGGTGC..................................................................................................1601.001.00---------1.00---------------------------------------
.......................................................................TGTGTTTTTTGTTTTTTCTATT.............................................................................................................................................................221.000.00-------------1.00-----------------------------------
....................................................................................TTTTCGGTTTTTTTTCGAG...................................................................................................................................................191.000.00-1.00-----------------------------------------------
.......................................................................................TCGGTTTTTTTTTTTTTCTGAT.............................................................................................................................................221.000.00-1.00-----------------------------------------------
...........................................................................................................................................................................................AAAGTGATTCTCCTACCTCAGCT........................................231.000.00-----------------------1.00-------------------------
.........................................................................................................................................................ATCTTGGCTCACTGCAGCCTCCACCTCCGGGC.................................................................321.000.001.00------------------------------------------------
.......................................................................................TCGGTTTTTTTTTTTTTAAG...............................................................................................................................................201.000.00-1.00-----------------------------------------------
.........................................................................................................................................................ATCTTGGCTCACTGCAGCCTCCACCCAGG....................................................................291.000.001.00------------------------------------------------
................................................................................................................................ACCCGTGCTGGACTGCAGTGGTGCAA................................................................................................2621.001.00-------0.50----0.50------------------------------------
.............................................................................................................................................................................................AGTGATTCTCCTACCTCAGCCCCAG....................................251.000.00-1.00-----------------------------------------------
.....................................................................................TTTCGGTTTTTTTTTTTTTGGGC..............................................................................................................................................231.000.00-1.00-----------------------------------------------
.........................................................................TGTTTTTTGTTTTTTCGTGG.............................................................................................................................................................201.000.00-1.00-----------------------------------------------
......................................................................................TTCGGTTTTTTTTTTTTTCTGGC.............................................................................................................................................231.000.00-1.00-----------------------------------------------
...................................................................................TTTTTCGGTTTTTTTTTTGGC..................................................................................................................................................211.000.00-1.00-----------------------------------------------
............................................................................................................................................................................................AAGTGATTCTCCTACCTCAG..........................................2001.001.00-------------------------------1.00-----------------
...................................................................................TTTTTCGGTTTTTTTTACT....................................................................................................................................................191.000.00---1.00---------------------------------------------
...................................................................................TTTTTCGGTTTTTTTTTTTTAG.................................................................................................................................................221.000.00-1.00-----------------------------------------------
......................................................................................TTCGGTTTTTTTTTTTTGGA................................................................................................................................................201.000.00-1.00-----------------------------------------------
...................................................................................................................TCGCAGTCCGTCAACA.......................................................................................................................161.000.00----1.00--------------------------------------------
....................................................................................TTTTCGGTTTTTTTTTTTCTGG................................................................................................................................................221.000.00-1.00-----------------------------------------------
...................................................................................................................................................................ACTGCAGCCTCCACCTCCTGGGTCCG.............................................................261.000.00-1.00-----------------------------------------------
..................................................................................TTTTTTCGGTTTTTTTTTTTTCGGC...............................................................................................................................................251.000.001.00------------------------------------------------
...................................................................................................................TCGCAGTCCGTCAACACTG....................................................................................................................191.000.00----1.00--------------------------------------------
.............................................................................TTTTGTTTTTTCGGTTTTTTTCTCC....................................................................................................................................................251.000.001.00------------------------------------------------
...................................................................................TTTTTCGGTTTTTTTTTGGC...................................................................................................................................................201.000.00-1.00-----------------------------------------------
...........................................................................TTTTTTGTTTTTTCGGTTTTTTTTTTTCTG.................................................................................................................................................301.000.00-1.00-----------------------------------------------
....................................................................................TTTTCGGTTTTTTTTTTTGG..................................................................................................................................................201.000.001.00------------------------------------------------
...................................................................................................................TCGCAGTCCGTCAACCTTG....................................................................................................................191.000.00--1.00----------------------------------------------
.................................................................................................................................................................TCACTGCAGCCTCCACCTCCTGGGTGGG.............................................................281.000.001.00------------------------------------------------
...................................................................................................................................................................ACTGCAGCCTCCACCTCCTGGGTCCAG............................................................271.000.00-1.00-----------------------------------------------
............................................................................TTTTTGTTTTTTCGGTTTTTTTTTGAG...................................................................................................................................................271.000.00-1.00-----------------------------------------------
.....................................................................................TTTCGGTTTTTTTTTTTGGTT................................................................................................................................................211.000.001.00------------------------------------------------
.....................................................................................TTTCGGTTTTTTTTTTTTTCGGCT.............................................................................................................................................241.000.00-1.00-----------------------------------------------
...................................................................................................................TCGCAGTCCGTCAACATTG....................................................................................................................191.000.00----1.00--------------------------------------------
...........................................................................TTTTTTGTTTTTTCGGTTTTTTTTA......................................................................................................................................................251.000.001.00------------------------------------------------
...................................................................................................................TCGCAGTCCGTCAACTTC.....................................................................................................................181.000.00--1.00----------------------------------------------
.............................................................................TTTTGTTTTTTCGGTTCGC..........................................................................................................................................................191.000.001.00------------------------------------------------
...................................................................................................................................................................ACTGCAGCCTCCACCTCCTGGGGCC..............................................................251.000.001.00------------------------------------------------
.............................................................................TTTTGTTTTTTCGGTTTTTTTTTTGG...................................................................................................................................................261.000.00-1.00-----------------------------------------------
.....................................................................................TTTCGGTTTTTTTTTTTGGCT................................................................................................................................................211.000.001.00------------------------------------------------
..................................................................................TTTTTTCGGTTTTTTTTTCGGC..................................................................................................................................................221.000.001.00------------------------------------------------
..................................................................................TTTTTTCGGTTTTTTTTTATT...................................................................................................................................................211.000.00---1.00---------------------------------------------
.......................................................................................TCGGTTTTTTTTTTTTTAAAC..............................................................................................................................................211.000.00---1.00---------------------------------------------
...................................................................................TTTTTCGGTTTTTTTTGAT....................................................................................................................................................191.000.00---1.00---------------------------------------------
.............................................................................................................................................................TGGCTCACTGCAGCCTCCACCCAGC....................................................................251.000.001.00------------------------------------------------
.......................................................................................TCGGTTTTTTTTTTTTTCTGGCT............................................................................................................................................231.000.001.00------------------------------------------------
...................................................................................................................TCGCAGTCCGTCAACTTCC....................................................................................................................191.000.00----1.00--------------------------------------------
...........................................................................................................................................................................................................................................TGCACCACCACGCCTTTTG191.000.00-1.00-----------------------------------------------
...................................................................................TTTTTCGGTTTTTTTTTTTAC..................................................................................................................................................211.000.00---1.00---------------------------------------------
.......................CGAGACTTGGCATGCTA..................................................................................................................................................................................................................171.000.00--------------------------1.00----------------------
.......................CGAGACTTGGCATGCTAAC................................................................................................................................................................................................................191.000.00---------------------------------1.00---------------
.................................................................................GTTTTTTCGGTTTTTTC........................................................................................................................................................171.000.001.00------------------------------------------------
..............................................................................TTTGTTTTTTCGGTTTTTTTTGAGG...................................................................................................................................................251.000.00-1.00-----------------------------------------------
.....................................................................................TTTCGGTTTTTTTTTTTTTAG................................................................................................................................................211.000.00-1.00-----------------------------------------------
..................................................................................TTTTTTCGGTTTTTTTTTTTCTT.................................................................................................................................................231.000.00---1.00---------------------------------------------
.......................................................................................TCGGTTTTTTTTTTTTCTTC...............................................................................................................................................201.000.00-1.00-----------------------------------------------
.........................................................................................................................................................ATCTTGGCTCACTGCAGCCTCCACCTCCGGGT.................................................................321.000.001.00------------------------------------------------
.........................................................................................................................................................ATCTTGGCTCACTGCAGCCTCCACCTGGGT...................................................................301.000.001.00------------------------------------------------
...................................................................................TTTTTCGGTTTTTTTTTTTG...................................................................................................................................................201.000.001.00------------------------------------------------
.....................................................................................TTTCGGTTTTTTTTTTTTTCTTCC.............................................................................................................................................241.000.001.00------------------------------------------------
...........................................................................................TTTTTTTTTTTTTCTGAGACAGCTG......................................................................................................................................251.000.00-1.00-----------------------------------------------
......................................................................TTGTGTTTTTTGTTTTTTCGAG..............................................................................................................................................................221.000.00-1.00-----------------------------------------------
............................................................................TTTTTGTTTTTTCGGTTTTTTTAG......................................................................................................................................................241.000.00-1.00-----------------------------------------------
......................................................................................TTCGGTTTTTTTTTTTTGGC................................................................................................................................................201.000.00-1.00-----------------------------------------------
......................................................................................TTCGGTTTTTTTTTTTTTGGGC..............................................................................................................................................221.000.001.00------------------------------------------------
....................................................................................TTTTCGGTTTTTTTTTTTGAGA................................................................................................................................................221.000.00-1.00-----------------------------------------------
...................................................................................TTTTTCGGTTTTTTTTTTTTTGGC...............................................................................................................................................241.000.001.00------------------------------------------------
............................................................................TTTTTGTTTTTTCGGTTTTTTTTTTTGC..................................................................................................................................................281.000.001.00------------------------------------------------
.............................................................................................................................................TGCAGTGGTGCAATCTTGGCTCACCGG..................................................................................271.000.00-1.00-----------------------------------------------
.........................................................................................................................................................ATCTTGGCTCACTGCAGCCTCCACCTAGAG...................................................................301.000.001.00------------------------------------------------
...................................................................................TTTTTCGGTTTTTTTTTTTGGCT................................................................................................................................................231.000.00-1.00-----------------------------------------------
...........................................................................TTTTTTGTTTTTTCGGTTTTTTTTTTTTTGAG...............................................................................................................................................321.000.001.00------------------------------------------------
....................................................................................TTTTCGGTTTTTTTTTTTAGC.................................................................................................................................................211.000.001.00------------------------------------------------
..................................................................................TTTTTTCGGTTTTTTTTTGGC...................................................................................................................................................211.000.001.00------------------------------------------------
........................................................................................CGGTTTTTTTTTTTTGGCC...............................................................................................................................................191.000.001.00------------------------------------------------
.......................................................................................................................................................................................................................AGTAGCTGGGTTTACTTGC................191.000.00-1.00-----------------------------------------------
.....................................................................................TTTCGGTTTTTTTTTTTTGC.................................................................................................................................................201.000.001.00------------------------------------------------
..................................................................................TTTTTTCGGTTTTTTTTTTGGCC.................................................................................................................................................231.000.001.00------------------------------------------------
...................................................................................TTTTTCGGTTTTTTTTTCGGC..................................................................................................................................................211.000.001.00------------------------------------------------
.............................................................................TTTTGTTTTTTCGGTTTTTTTTGAC....................................................................................................................................................251.000.00-1.00-----------------------------------------------
....................................................................................TTTTCGGTTTTTTTTTTTTTGGTA..............................................................................................................................................241.000.00-1.00-----------------------------------------------
..................................................................................TTTTTTCGGTTTTTTTTTTTGA..................................................................................................................................................221.000.001.00------------------------------------------------
...................................................................................................................................................................ACTGCAGCCTCCACCTCCTGGGGTGA.............................................................261.000.00-1.00-----------------------------------------------
.......................................................................................TCGGTTTTTTTTTTTTTCTGGTC............................................................................................................................................231.000.00-1.00-----------------------------------------------
...................................................................................TTTTTCGGTTTTTTTTTTTTTGGCT..............................................................................................................................................251.000.00-1.00-----------------------------------------------
.................................................................................................................................................................TCACTGCAGCCTCCACCTCCTGGGACCC.............................................................281.000.00-1.00-----------------------------------------------
.....................................................................................TTTCGGTTTTTTTTTTTTTGGCC..............................................................................................................................................231.000.001.00------------------------------------------------
......................................................................................TTCGGTTTTTTTTTTTTCCC................................................................................................................................................201.000.001.00------------------------------------------------
...................................................................................................................TCGCAGTCCGTCAACATCG....................................................................................................................191.000.00--1.00----------------------------------------------
.....................................................................................TTTCGGTTTTTTTTTTTTGGA................................................................................................................................................211.000.001.00------------------------------------------------
..................................................................................TTTTTTCGGTTTTTTTTTTTTTGT................................................................................................................................................241.000.001.00------------------------------------------------
..................................................................................TTTTTTCGGTTTTTTTTTTTGGT.................................................................................................................................................231.000.001.00------------------------------------------------
..................................................................................TTTTTTCGGTTTTTTTTCTTG...................................................................................................................................................211.000.00---1.00---------------------------------------------
.......................................................................................................TCTGAGACAGGATCGCGC.................................................................................................................................181.000.00--------------1.00----------------------------------
..........................................................................................................................................................................................TAAAGTGATTCTCCTACCAACC..........................................221.000.00-1.00-----------------------------------------------
..................................................................................TTTTTTCGGTTTTTTTTTTTTGGCC...............................................................................................................................................251.000.001.00------------------------------------------------
.............................................................................TTTTGTTTTTTCGGTTTGAT.........................................................................................................................................................201.000.00---1.00---------------------------------------------
.......................CGAGACTTGGCATGCTAC.................................................................................................................................................................................................................181.000.00-------------------1.00-----------------------------
.......................................................................................TCGGTTTTTTTTTTTTCACC...............................................................................................................................................201.000.001.00------------------------------------------------
....................................................................................TTTTCGGTTTTTTTTTTGGC..................................................................................................................................................201.000.001.00------------------------------------------------
.....................................................................................TTTCGGTTTTTTTTTTTTGGT................................................................................................................................................211.000.001.00------------------------------------------------
.......................................................................................TCGGTTTTTTTTTTTTTCTGGC.............................................................................................................................................221.000.001.00------------------------------------------------
......................................................................................TTCGGTTTTTTTTTTTTTCGGC..............................................................................................................................................221.000.00---1.00---------------------------------------------
...............GCATCTGGCGAGACTTGG.........................................................................................................................................................................................................................1830.670.67------------------------------------0.67------------
...................CTGGCGAGACTTGGC........................................................................................................................................................................................................................1530.670.67-------------------------------------0.67-----------
...................................................................................................................................CGTGCTGGACTGCAGTGGTGCAA................................................................................................2320.500.50---------------------------------------------0.50---
..........GCGAAGCATCTGGCGAGACTTGGCATGC....................................................................................................................................................................................................................2820.500.50-------0.50-----------------------------------------
............GAAGCATCTGGCGAGACTTGGCAT......................................................................................................................................................................................................................2420.500.50-----------------0.50-------------------------------
...........CGAAGCATCTGGCGAGAC.............................................................................................................................................................................................................................1820.500.50-----------------0.50-------------------------------
.....................GGCGAGACTTGGCATGCAT..................................................................................................................................................................................................................1920.500.50---------------------------------------0.50---------
............GAAGCATCTGGCGAGACTTGGC........................................................................................................................................................................................................................2220.500.50------0.50------------------------------------------
..................TCTGGCGAGACTTGGCATGCA...................................................................................................................................................................................................................2120.500.50----------------------------------0.50--------------
.........AGCGAAGCATCTGGCGAGACTTGGCATG.....................................................................................................................................................................................................................2820.500.50-----------------------------------------------0.50-
..............................TGGCATGCATGTTATCATAGGTGAT...................................................................................................................................................................................................2520.500.50----------------------------------------------0.50--
....................TGGCGAGACTTGGCATGCA...................................................................................................................................................................................................................1920.500.50------------------------------------------0.50------
.............AAGCATCTGGCGAGACTTGGCATGCA...................................................................................................................................................................................................................2620.500.50----------------------------------0.50--------------
................CATCTGGCGAGACTTGGCATGCATG.................................................................................................................................................................................................................2520.500.50-----------------------------------------0.50-------
.....................................................................................TTTCGGTTTTTTTTTTTTTCTG...............................................................................................................................................2220.500.50-0.50-----------------------------------------------
................................................................................................................................ACCCGTGCTGGACTGCAGTGGTGCA.................................................................................................2520.500.50--------------------------------------------0.50----
..........GCGAAGCATCTGGCGAGACTTGGC........................................................................................................................................................................................................................2420.500.50------0.50------------------------------------------
.................................................................................................................................CCCGTGCTGGACTGCAGTGGTGCA.................................................................................................2420.500.50----------------------------------------0.50--------
....TCTACAGCGAAGCATCTGGCGAG...............................................................................................................................................................................................................................2320.500.50-------------------------------------------0.50-----
.................ATCTGGCGAGACTTGGCAT......................................................................................................................................................................................................................1930.330.33-------------0.33-----------------------------------
.............................................................................TTTTGTTTTTTCGGTTTT...........................................................................................................................................................1860.170.17---0.17---------------------------------------------
.....................................................................................................................................TGCTGGACTGCAGTGGTGCAA................................................................................................2180.120.12-------0.12-----------------------------------------

Antisense strand
CTATTCTACAGCGAAGCATCTGGCGAGACTTGGCATGCATGTTATCATAGGTGATGACTTTTACAGTTACTTGTGTTTTTTGTTTTTTCGGTTTTTTTTTTTTTCTGAGACAGGATCGCAGTCCGTCAACCCGTGCTGGACTGCAGTGGTGCAATCTTGGCTCACTGCAGCCTCCACCTCCTGGGTTAAAGTGATTCTCCTACCTCAGCCTCCCGAGTAGCTGGGTTTACAGACATGCACCACCACGCCT
........................................................................................(((((((.((((......)))).)))))))(((..((......))..)))................................................................................................................
..............................................................................79.........................................................138..............................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189782SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189784DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR189787DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
GSM956925PAZD5SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR040019(GSM532904)
G701T. (cervix)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR189786SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR343334SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR343335
..............................................................................................................................................................GGCTCACTGCAGCCTCCACCTCCTGGGTTACAG........................................................... 332.000.00-2.00-----------------------------------------------
.................................................................................................................................................................AACCCAGGAGGTGGAGGCTGCAGTGA............................................................... 2602.002.00-----2.00-------------------------------------------
...............................................................................................................................................................GCTCACTGCAGCCTCCACCTCCTGGGTGAGG............................................................ 311.000.001.00------------------------------------------------
...................................................................................................................................................................................................................CCCGAGTAGCTGGGTTTACGG.................. 211.000.00------------------1.00------------------------------
..............................................................................................................................................................GGCTCACTGCAGCCTCCACCTCCTGGGTCG.............................................................. 301.000.00-1.00-----------------------------------------------
.......................................................................................................................................................................CAGCCTCCACCTCCTGGGTTGCT............................................................ 231.000.00--------1.00----------------------------------------
...................................................................................................................................................................................................TCTCCTACCTCAGCCTCCCGAGTGCGG............................ 271.000.001.00------------------------------------------------
...............................................................................................................................................................................................TGATTCTCCTACCTCAATAG....................................... 201.000.00--1.00----------------------------------------------
..................................................................................................................................................................................................TTCTCCTACCTCAGCCTCCCGAAA................................ 241.000.00----------1.00--------------------------------------
......................................................................................................................................................................GCAGCCTCCACCTCCTGGGTTGGCG........................................................... 251.000.001.00------------------------------------------------
......................................................................................................................................................................GCAGCCTCCACCTCCTGGGTCGCG............................................................ 241.000.00-1.00-----------------------------------------------
.....................................................................................................................................................................ACCCAGGAGGTGGAGGCTGCA................................................................ 2101.001.00-----1.00-------------------------------------------
....................................................................................................................................................................CCCAGGAGGTGGAGGCTGCAG................................................................. 2101.001.00---------------1.00---------------------------------
.......................................................................................................................................................................................................CTACCTCAGCCTCCCGAGTCGA............................. 221.000.00-1.00-----------------------------------------------
......................................................................................................................................................................GCAGCCTCCACCTCCTGGGTTCGTT........................................................... 251.000.00--------1.00----------------------------------------
..................................................................................................................................................................................................TTCTCCTACCTCAGCCTCCCGATGA............................... 251.000.00----------1.00--------------------------------------
..................................................................................................................................................................CACTGCAGCCTCCACCTCCTGGGTCTTT............................................................ 281.000.00--------------------------------1.00----------------
....................................................................................................................................................................CTGCAGCCTCCACCTCCTGCC................................................................. 211.000.00------1.00------------------------------------------
..................................................................................................................................................................................................TTCTCCTACCTCAGCCTCCCGAGAAA.............................. 261.000.00-------------------------1.00-----------------------
.......................................................................................................................................................................................................CTACCTCAGCCTCCCGAGTAGCTCCG......................... 261.000.001.00------------------------------------------------
......................................................................................................................................................................................................CCTACCTCAGCCTCCCGAGTAGCAG........................... 251.000.00-1.00-----------------------------------------------
............................................................................................................................................CTGCAGTGGTGCAATCTCCTC......................................................................................... 211.000.00-1.00-----------------------------------------------
....................................................................................................................................................................................................GCTACTCGGGAGGCTGAGGTAGGAG............................. 2501.001.00-----------1.00-------------------------------------
....................................................................................................................................................................................................CTCCTACCTCAGCCTCCCGAGTTG.............................. 241.000.00-1.00-----------------------------------------------
...............................................................................................................................................................................................TGATTCTCCTACCTCAAAAA....................................... 201.000.00--------------------1.00----------------------------
.......................................................................................................................................................................................................CTACCTCAGCCTCCCGAGTACAA............................ 231.000.00-----------------------------------1.00-------------
...................................................................................................................................................................................................TCTCCTACCTCAGCCTCCCTA.................................. 211.000.00---------------------------1.00---------------------
....................................................................................................................................................................CTGCAGCCTCCACCTCCTGGGTTGCAG........................................................... 271.000.001.00------------------------------------------------
..................................................................................................................................................................CACTGCAGCCTCCACCTCCTGGGTTGGAG........................................................... 291.000.001.00------------------------------------------------
................................................................................................................................ACCCGTGCTGGACTGCAGTGGTGCAAGA.............................................................................................. 2821.000.001.00------------------------------------------------
..................................................................................................................................................................................................TTCTCCTACCTCAGCCTCCCGAA................................. 231.000.00----------------------1.00--------------------------
...................................................................................................................................................................ACCCAGGAGGTGGAGGCTGCAGT................................................................ 2301.001.00-----1.00-------------------------------------------
...............................................................................................................................................................................................TGATTCTCCTACCTCAGCCTAAAA................................... 241.000.00----------------1.00--------------------------------
......................................................................................................................................................................GCAGCCTCCACCTCCTGGGTTTGG............................................................ 241.000.00-1.00-----------------------------------------------
...............................................................................................................................................................................................TGATTCTCCTACCTCAACAT....................................... 201.000.00----1.00--------------------------------------------
.............................................................................................................................................................................................AGTGATTCTCCTACCTCAGCCTCCA.................................... 251.000.001.00------------------------------------------------
....................................................................................................................................................................AACCCAGGAGGTGGAGGCTGCAG............................................................... 2301.001.00---------------------1.00---------------------------
.......................................................................................................................................................................................................CTACCTCAGCCTCCCGAGTAGCA............................ 231.000.00------------------------1.00------------------------
....................................................................................................................................................................................................CTCCTACCTCAGCCTCCCGATG................................ 221.000.00-1.00-----------------------------------------------
.......................................................................................TCGGTTTTTTTTTTTTG.................................................................................................................................................. 171.000.00----------------------------1.00--------------------
..................................................................................................................................................................................................CGGGAGGCTGAGGTAGGAGAA................................... 2101.001.00-----------1.00-------------------------------------
.................................................................................................................................................................TCACTGCAGCCTCCACCTCCTGGGTCAT............................................................. 281.000.00-----1.00-------------------------------------------
.......................................................................................................................................................................CAGCCTCCACCTCCTGGGGCTT............................................................. 221.000.00-----------------------------1.00-------------------
..............................................................................................................................................................CCCAGGAGGTGGAGGCTGCAGTGAGCC................................................................. 2701.001.00---------1.00---------------------------------------
...........................................................................................................................................................................................AAAGTGATTCTCCTACCTCAGCCTCCCGAGTC............................... 321.000.00-1.00-----------------------------------------------
........................................................................................................................................................................................................TACCTCAGCCTCCCGATAA............................... 191.000.00------------------------------1.00------------------
......................................ATGTTATCATAGGTGTTG.................................................................................................................................................................................................. 180.600.00--------------------------------------0.40---------0.20
......................................................................................................................................................................................................AACCCAGCTACTCGGGAGGCTGAGGTAGG....................... 2950.200.200.20------------------------------------------------
...........................................................................................................................................................TTAACCCAGGAGGTGGAGGCTGCAGTGAGCCAAG............................................................. 3450.200.200.20------------------------------------------------
......................................CACCTATGATAACAT..................................................................................................................................................................................................... 1550.200.20--------------------------------------0.20----------