ID: uc004cpe.1_intron_3_0_chrX_228295_r.3p
GENE: GTPBP6(2)
chrX:228245-228494-


(1)
AGO1.ip 		(2)
AGO2.ip 		(10)
B-CELL 		(6)
BRAIN 		(7)
BREAST 		(35)
CELL-LINE 		(5)
CERVIX 		(1)
FIBROBLAST 		(5)
HEART 		(3)
HELA 		(1)
KIDNEY 		(8)
LIVER 		(2)
OTHER 		(1)
RRP40.ip 		(30)
SKIN 		(2)
UTERUS 		(1)
XRN.ip

Sense strand
CCATCGGCCCGAGAACAGCGACGGTGGCTTTGTCCCACGCGTCGGGTCTGGCCCGGGGTGCCCGAGGAGCTCAGGGACCGTGTAGCCCGGGGTGCGGCCCCCCAGAGGGTGCCGTGGTCTCCATTTGGAGGGCCTGGCTGCGGCGCTAGGAGTTGGGACGCAGGGATCTCTGCAGCGCCCTGACCTCCACGCCCTCCTAGGAAAGACCACGCTGATCAAGGCACTGACGGGCGATGCCGCCATCCAGCCA
..................................................................................(((((((.(((..(((((.(((((((..((....))..)).))))).)))))..))).))).))))......................................................................................................
.................................................................................82................................................................................164....................................................................................
SizePerfect hitTotal NormPerfect NormSRR189787SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR189786SRR189784SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		TAX577580(Rovira)
total RNA. (breast)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR038857(GSM458540)
D20. (cell line)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		TAX577745(Rovira)
total RNA. (breast)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		DRR001482(DRX001036)
"Hela long total cell fraction, control". (hela)		SRR343334SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)		SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR189782SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR040039(GSM532924)
G531T. (cervix)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR038861(GSM458544)
MM466. (cell line)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038860(GSM458543)
MM426. (cell line)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		TAX577744(Rovira)
total RNA. (breast)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR040027(GSM532912)
G220T. (cervix)		SRR038852(GSM458535)
QF1160MB. (cell line)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR037936(GSM510474)
293cand1. (cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR038859(GSM458542)
MM386. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR038863(GSM458546)
MM603. (cell line)		TAX577453(Rovira)
total RNA. (breast)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR040030(GSM532915)
G013N. (cervix)		SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)		SRR040023(GSM532908)
G575T. (cervix)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040016(GSM532901)
G645N. (cervix)		SRR444069(SRX128917)
Sample 26cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
..........................................................................................................................................TGCGGCGCTAGGAGTTGGGACG..........................................................................................2225.505.50-0.50-------1.00----0.50----------------------------0.50-------------------1.00---------------------------0.50-0.500.50----------0.50--------------
......................................................................................CCGGGGTGCGGCCCCGGG..................................................................................................................................................185.000.00--3.00----------------2.00----------------------------------------------------------------------------------------------------
............................................................................................................................TTGGAGGGCCTGGCTGCGGCGCT.......................................................................................................2324.504.50-0.500.500.50-0.50---------------0.50-----0.500.50----------------------------------------------0.50--------------------0.50-----------------------
...........................................................................................................................TTTGGAGGGCCTGGCTGCGGCATT.......................................................................................................243.000.00--1.00-------------------------------1.00-------------------1.00-----------------------------------------------------------------
..........................................................................................................................................TGCGGCGCTAGGAGTTGGGA............................................................................................2023.003.00----------1.00------------0.50----------------------------------------------------0.50------------------0.50----0.50-------------------
............................................................................................................................TTGGAGGGCCTGGCTGCGGCGCTT......................................................................................................2423.004.50---1.00---------------------------1.00----------------------------------1.00-----------------------------------------------------
..........................................................................................................................................TGCGGCGCTAGGAGTTGGGAC...........................................................................................2123.003.00--------0.50-----------1.00------------------------------------0.50----------------------0.50-------------------------0.50-------------
................................................................................................................................................................CAGGGATCTCTGCAGCG.........................................................................1723.003.00--------0.50-----------0.50----1.00-----------------0.50-------------------------------------------------------0.50--------------------
..........................................................................................................................................TGCGGCGCTAGGAGTTGGGACGC.........................................................................................2323.003.00-0.50------0.50-----------------0.50---0.50-------0.50---------------------------------------0.50-----------------------------------------
...........................................................................................................................TTTGGAGGGCCTGGCTGCGGCGC........................................................................................................2322.502.50----------0.50--2.00----------------------------------------------------------------------------------------------------------
.........................................................................................................................................CTGCGGCGCTAGGAGTTGGGACGA.........................................................................................242.000.00------------------1.00----------------------1.00------------------------------------------------------------------------------
............................................................................................................................TTGGAGGGCCTGGCTGCGGCGA........................................................................................................222.000.00-----1.00----------------------------------1.00-------------------------------------------------------------------------------
............................................................................................................................TTGGAGGGCCTGGCTGCGGCGC........................................................................................................2222.002.00-0.50--------------------0.50---------------0.50------------------------------------------0.50--------------------------------------
...........................................................................................................................TTTGGAGGGCCTGGCTGCGGAAA........................................................................................................2322.000.50------2.00-----------------------------------------------------------------------------------------------------------------
............................................................................................................................TTGGAGGGCCTGGCTGCGGCGCTAA.....................................................................................................252.000.00-----------------1.00---------------------------------1.00--------------------------------------------------------------------
............................................................................................................................................CGGCGCTAGGAGTTGGGACGCT........................................................................................222.000.00------------------1.00-----------------------------------------1.00-----------------------------------------------------------
..........................................................................................................................................TGCGGCGCTAGGAGTTGGGACGCAT.......................................................................................252.000.00---------------------------------------1.00----------------------1.00---------------------------------------------------------
..........................................................................................................................................................................................................................AGGCACTGACGGGCGATG..............1821.501.50----------------------------1.00---------------------------------------------------------0.50---------------------------------
............................................................................................................................TTGGAGGGCCTGGCTGCGGC..........................................................................................................2021.501.50--0.50-------0.50-------------------------------0.50-----------------------------------------------------------------------------
.............................................................................................................................TGGAGGGCCTGGCTGCGGCGCTT......................................................................................................231.000.00--------------------------------------------------------------------1.00---------------------------------------------------
...........................................................................................................................TTTGGAGGGCCTGGCTGCGGCGCA.......................................................................................................2421.002.50-----------------------------------------------1.00------------------------------------------------------------------------
...........................................................................................................................TTTGGAGGGCCTGGCTGCGGCGCTT......................................................................................................2521.001.00---------------------------------------------1.00--------------------------------------------------------------------------
..........................................................................................................................................TGCGGCGCTAGGAGTTGGGACGCT........................................................................................2421.003.00--------------1.00---------------------------------------------------------------------------------------------------------
............................................................................................................................TTGGAGGGCCTGGCTGCGGAA.........................................................................................................2121.000.50----------------------------------------------------------------1.00-------------------------------------------------------
...........................................................................................................................................GCGGCGCTAGGAGTTGGGACGC.........................................................................................2221.001.00---------0.50------------------------------------------------------------------------------0.50-------------------------------
.........................................................................................................................................CTGCGGCGCTAGGAGTTGGGACGCTCTT.....................................................................................281.000.00---1.00--------------------------------------------------------------------------------------------------------------------
............................................................................................................................TTGGAGGGCCTGGCTGCC............................................................................................................181.000.00----------------------------------------------------1.00-------------------------------------------------------------------
...............................................................................................................................................................................CGCCCTGACCTCCACGCCCTC......................................................2121.001.00------------0.50----------------------------------------------------------------------------0.50------------------------------
.................................................................................................................................GGGCCTGGCTGCGGCGGCGG.....................................................................................................201.000.00-------1.00----------------------------------------------------------------------------------------------------------------
............................................................................................................................................CGGCGCTAGGAGTTGGGACGCAT.......................................................................................231.000.00-------------------------------------------------------1.00----------------------------------------------------------------
...........................................................................................................................TTTGGAGGGCCTGGCTGCGGCGCTAT.....................................................................................................261.000.00---------------------------------------------------------------------1.00--------------------------------------------------
..........................................................................................................................................TGCGGCGCTAGGAGTTGGGTAT..........................................................................................2221.000.50------------------------------------1.00-----------------------------------------------------------------------------------
......................................................................................................................................TGGCTGCGGCGCTAGGAGTTGGGAC...........................................................................................2521.001.00-0.50---------------------------------------------------------------------------------0.50------------------------------------
..........................................................................................................................................TGCGGCGCTAGGAGTTGGGACGAA........................................................................................2421.005.50--------------------------------------------------------1.00---------------------------------------------------------------
..........................................................................................................................................TGCGGCGCTAGGAGTTGGT.............................................................................................1921.000.50-------------------------------------------------------------1.00----------------------------------------------------------
............................................................................................................................TTGGAGGGCCTGGCTGA.............................................................................................................171.000.00--------------------------------------------1.00---------------------------------------------------------------------------
.....................................CGCGTCGGGTCTGGCCGGTG.................................................................................................................................................................................................201.000.00-----------------------------------------------------------------1.00------------------------------------------------------
............................................................................................................................TTGGAGGGCCTGGCTGCGGCGCAT......................................................................................................2421.002.00----------------1.00-------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................GCTGATCAAGGCACTGACGGG...................2121.001.00-----------------------------1.00------------------------------------------------------------------------------------------
............................................................................................................................TTGGAGGGCCTGGCTGAAAA..........................................................................................................201.000.00-----------1.00------------------------------------------------------------------------------------------------------------
............................................................................................................................TTGGAGGGCCTGGCTGCGGCGCA.......................................................................................................2321.002.00----------------------------------------------------------1.00-------------------------------------------------------------
.............................................................................................................................TGGAGGGCCTGGCTGCGAAT.........................................................................................................201.000.00-----------------------------------1.00------------------------------------------------------------------------------------
..........................................................................................................................................TGCGGCGCTAGGAGTTGGGAAG..........................................................................................2221.003.00---------1.00--------------------------------------------------------------------------------------------------------------
............................................................................................................................TTGGAGGGCCTGGCTGCGGCGAA.......................................................................................................231.000.00----------------1.00-------------------------------------------------------------------------------------------------------
.............................................................................................................................TGGAGGGCCTGGCTGCGGCGCTAAT....................................................................................................251.000.00-1.00----------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................TGCGGCGCTAGGAGTTGGGACGT.........................................................................................2321.005.50-----------------------------------------------------------1.00------------------------------------------------------------
............................................................................................................................TTGGAGGGCCTGGCTGCGGCGT........................................................................................................221.000.00--------------------------------------------------1.00---------------------------------------------------------------------
......................................................................................................................................TGGCTGCGGCGCTAGGAGTTGGGACGT.........................................................................................2721.000.50-----------------------------------------------------1.00------------------------------------------------------------------
.............................................................CCGAGGAGCTCAGGGTC............................................................................................................................................................................171.000.00---------------------------1.00--------------------------------------------------------------------------------------------
........................................................................................................................................GCTGCGGCGCTAGGAGTTGGGACGT.........................................................................................251.000.00---1.00--------------------------------------------------------------------------------------------------------------------
............................................................................................................................TTGGAGGGCCTGGCTGCGGAAA........................................................................................................2221.000.50-------1.00----------------------------------------------------------------------------------------------------------------
...........................................................................................................................TTTGGAGGGCCTGGCTGCGGCGTAT......................................................................................................251.000.00----------------------------------------------1.00-------------------------------------------------------------------------
............................................................................................................................TTGGAGGGCCTGGCTGCGGCGCATT.....................................................................................................2521.002.00-----------------------------------------------------------------------1.00------------------------------------------------
...........................................................................................................................TTTGGAGGGCCTGGCTGCGAAAA........................................................................................................231.000.00------1.00-----------------------------------------------------------------------------------------------------------------
......................................................................................................................................TGGCTGCGGCGCTAGGAGTTGGGACGTT........................................................................................2821.000.50-----------------1.00------------------------------------------------------------------------------------------------------
.......................................................................................CGGGGTGCGGCCCCCCCGGG...............................................................................................................................................201.000.00--------------------------1.00---------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................AAGACCACGCTGATCAAGGCACTGACGGG...................2921.001.00------------1.00-----------------------------------------------------------------------------------------------------------
..........................................................................................................................................TGCGGCGCTAGGAGTTGGA.............................................................................................1921.000.50-----------------------1.00------------------------------------------------------------------------------------------------
...........................................................................................................................TTTGGAGGGCCTGGCTGCGGCGCT.......................................................................................................2421.001.00--------------0.50---------------------------------------------------------0.50-----------------------------------------------
.............................................................................................................................................................................AGCGCCCTGACCTCCACGCCCTCCCAGG.................................................281.000.00------------------------------------------------1.00-----------------------------------------------------------------------
..........................................................................................................................ATTTGGAGGGCCTGGCTGCGGCGGTAG.....................................................................................................271.000.00-------------------------------------------------------------------1.00----------------------------------------------------
........................................................................................................................................GCTGCGGCGCTAGGAGTTGGGACAA.........................................................................................251.000.00----1.00-------------------------------------------------------------------------------------------------------------------
.....GGCCCGAGAACAGCGACGGTGGCTTTGTCCCACG...................................................................................................................................................................................................................3420.500.50-----0.50------------------------------------------------------------------------------------------------------------------
......................................................................................................................................TGGCTGCGGCGCTAGGAGTTGG..............................................................................................2220.500.50------------------------0.50-----------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................AGACCACGCTGATCAAGGCACTGACGGGCG.................3020.500.50-------------------------------------------------------------------------------------0.50----------------------------------
...............CAGCGACGGTGGCTTTGTCC.......................................................................................................................................................................................................................2020.500.50------------0.50-----------------------------------------------------------------------------------------------------------
...........................................................................................................................................GCGGCGCTAGGAGTTGGG.............................................................................................1820.500.50---------------------0.50--------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................GACCACGCTGATCAAGGCACTGACGGG...................2720.500.50------------------------------0.50-----------------------------------------------------------------------------------------
..................................................................................................................................................................................................................GCTGATCAAGGCACTGACGGGCGATGCCG...........2920.500.50--------------------------------------------------------------------------------------------0.50---------------------------
......................................................................................................................................TGGCTGCGGCGCTAGGAGTTGGGACG..........................................................................................2620.500.50--------------------------------------------------------------------------------------------------0.50---------------------
.........................................................................................................................................................................................................................AAGGCACTGACGGGCGATGCCGCC.........2420.500.50-------0.50----------------------------------------------------------------------------------------------------------------
...........................................................................................................................................GCGGCGCTAGGAGTTGGGACG..........................................................................................2120.500.50-----------------------------------------------------------------------------------------------------------0.50------------
..........................................................................................................................................TGCGGCGCTAGGAGTTGGG.............................................................................................1920.500.50--------0.50---------------------------------------------------------------------------------------------------------------
.......................................................................................................................................GGCTGCGGCGCTAGGAGTTGGGACG..........................................................................................2520.500.50------------------------------------------------------------------------------------------------------0.50-----------------
............................................................................................................................................................................................................GACCACGCTGATCAAGGCACTGACGGGC..................2820.500.50---------------------------------------------------------------------------------------0.50--------------------------------
...................................................................................................................................................AGGAGTTGGGACGCAGGGATCTCTGCAG...........................................................................2820.500.50----------------------------------------------------------------------------------0.50-------------------------------------
.....................................................................................................................................................................................................TAGGAAAGACCACGCTGATCAAGGCAC..........................2720.500.50-----0.50------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................CTGGCTGCGGCGCTAGGAGTTG...............................................................................................2220.500.50-------0.50----------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................TCAAGGCACTGACGGGCGA................1920.500.50-----------------------------------------------------------------------------------------------------0.50------------------
............................................................................................................................TTGGAGGGCCTGGCTGCGG...........................................................................................................1920.500.50--------0.50---------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................CAGCGCCCTGACCTCCACGCCCTCCTAG..................................................2820.500.50---0.50--------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................ACGCTGATCAAGGCACTGACGG....................2220.500.50-------------------------------------------------------------------------0.50----------------------------------------------
..............................................................CGAGGAGCTCAGGGACCGTG........................................................................................................................................................................2020.500.50-----0.50------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................TTGGGACGCAGGGATCTCTGCA............................................................................2220.500.50--------------------------------------------------------------------------------------------------------0.50---------------
...........................................................................................................................TTTGGAGGGCCTGGCTGCGG...........................................................................................................2020.500.50------------------------------------------0.50-----------------------------------------------------------------------------
......................................................................................................................................TGGCTGCGGCGCTAGGAGTTGGGA............................................................................................2420.500.50-------------------------------------------------------------------------------0.50----------------------------------------
.................................................................................................................................................................................................................CGCTGATCAAGGCACTGACGGGCGA................2520.500.50---------------------------------------------------------0.50--------------------------------------------------------------
..........................................................................................................................................TGCGGCGCTAGGAGTTGG..............................................................................................1820.500.50-----------0.50------------------------------------------------------------------------------------------------------------
...........................................................................................................................................GCGGCGCTAGGAGTTGGGACGCA........................................................................................2320.500.50-------------------------------------------------------------------------------------------------------0.50----------------
.....................................................................................................................................CTGGCTGCGGCGCTAGGAGTTGG..............................................................................................2320.500.50------------------------------------------------------------------------------------------0.50-----------------------------
...................................................................................................................................................................................................................CTGATCAAGGCACTGACG.....................1820.500.50-------------------------------------------------------------------------------------------------0.50----------------------
........................................................................................................................................................................................................GAAAGACCACGCTGATCAAGGC............................2220.500.50--------------------------------------------------------------------------0.50---------------------------------------------
...........................................................................................................................TTTGGAGGGCCTGGCTG..............................................................................................................1730.330.33--0.33---------------------------------------------------------------------------------------------------------------------
.......................................................................................................AGAGGGTGCCGTGGTCT..................................................................................................................................1730.330.33------------------------------------------------------------------------0.33-----------------------------------------------
...........................................................................................................................TTTGGAGGGCCTGGCTGAAAA..........................................................................................................2130.330.33-0.33----------------------------------------------------------------------------------------------------------------------
...........................................................................................................................TTTGGAGGGCCTGGCTGAGA...........................................................................................................2030.330.33----------0.33-------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................AAGACCACGCTGATCAAG..............................1830.330.33------------------------------------------------------------------------------------------------------------------0.33-----
...........................................................................................................................TTTGGAGGGCCTGGCTGTATT..........................................................................................................2130.330.33-----------------------------0.33------------------------------------------------------------------------------------------

Antisense strand
CCATCGGCCCGAGAACAGCGACGGTGGCTTTGTCCCACGCGTCGGGTCTGGCCCGGGGTGCCCGAGGAGCTCAGGGACCGTGTAGCCCGGGGTGCGGCCCCCCAGAGGGTGCCGTGGTCTCCATTTGGAGGGCCTGGCTGCGGCGCTAGGAGTTGGGACGCAGGGATCTCTGCAGCGCCCTGACCTCCACGCCCTCCTAGGAAAGACCACGCTGATCAAGGCACTGACGGGCGATGCCGCCATCCAGCCA
..................................................................................(((((((.(((..(((((.(((((((..((....))..)).))))).)))))..))).))).))))......................................................................................................
.................................................................................82................................................................................164....................................................................................
SizePerfect hitTotal NormPerfect NormSRR189787SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR189786SRR189784SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		TAX577580(Rovira)
total RNA. (breast)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR038857(GSM458540)
D20. (cell line)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		TAX577745(Rovira)
total RNA. (breast)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		DRR001482(DRX001036)
"Hela long total cell fraction, control". (hela)		SRR343334SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)		SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR189782SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR040039(GSM532924)
G531T. (cervix)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR038861(GSM458544)
MM466. (cell line)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038860(GSM458543)
MM426. (cell line)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		TAX577744(Rovira)
total RNA. (breast)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR040027(GSM532912)
G220T. (cervix)		SRR038852(GSM458535)
QF1160MB. (cell line)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR037936(GSM510474)
293cand1. (cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR038859(GSM458542)
MM386. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR038863(GSM458546)
MM603. (cell line)		TAX577453(Rovira)
total RNA. (breast)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR040030(GSM532915)
G013N. (cervix)		SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)		SRR040023(GSM532908)
G575T. (cervix)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040016(GSM532901)
G645N. (cervix)		SRR444069(SRX128917)
Sample 26cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
.....................................................................................................................................................................................GACCTCCACGCCCTCCTACATT............................................... 2217.000.0017.00-----------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................ACCTCCACGCCCTCCTAT.................................................. 187.000.00-6.00----------------------1.00-----------------------------------------------------------------------------------------------
........................................................................................................................................................................................TAGGAGGGCGTGGAG................................................... 1534.674.67-3.33---------0.67------------------0.33------------------------------------------------------------------------------0.33----------
.......................................................................................................................................................................................TAGGAGGGCGTGGAGG................................................... 1632.672.67-2.33-------------------------------------------------------------------------------------------------------------0.33--------
.....................................................................................................................................................................................GACCTCCACGCCCTCCTACA................................................. 202.000.002.00-----------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................TAGGAGGGCGTGGAGGT................................................... 1721.501.50-0.50-----------------------0.50---------------------------------------------------0.50------------------------------------------
.....................................................................................................................................................................................GAGGGCGTGGAGGTC...................................................... 1541.251.25-1.25----------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................GGCACTGACGGGCGACTTC............ 191.000.00-------------------------------------1.00----------------------------------------------------------------------------------
.............................................................CCGAGGAGCTCAGGGACCGG......................................................................................................................................................................... 201.000.00----1.00-------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................GACCTCCACGCCCTCCTCATT................................................ 211.000.001.00-----------------------------------------------------------------------------------------------------------------------
...............................................................................GTGTAGCCCGGGGTGTG.......................................................................................................................................................... 171.000.00---------------------------------1.00--------------------------------------------------------------------------------------
........................................................................................................................................................................TCTGCAGCGCCCTGACCTT............................................................... 191.000.00---------------1.00--------------------------------------------------------------------------------------------------------
........................................................................................................................................................................TCTGCAGCGCCCTGAAATT............................................................... 191.000.00---------------1.00--------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................ACCTCCACGCCCTCCTATG................................................. 191.000.00----1.00-------------------------------------------------------------------------------------------------------------------
..................................................GCCCGGGGTGCCCGAAGGC..................................................................................................................................................................................... 191.000.001.00-----------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................CTCCACGCCCTCCTAA.................................................. 161.000.00-1.00----------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................GACCTCCACGCCCTCCTACAGT............................................... 221.000.001.00-----------------------------------------------------------------------------------------------------------------------
.....................CGGTGGCTTTGTCCCGAAG.................................................................................................................................................................................................................. 191.000.00--------------------------------1.00---------------------------------------------------------------------------------------
.....................................................................................................................................................................................GACCTCCACGCCCTCCTACATA............................................... 221.000.001.00-----------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................GACCTCCACGCCCTCCTT................................................... 181.000.00-------------------------------------------------1.00----------------------------------------------------------------------
........................................................................................................................................................................................CTCCACGCCCTCCTAC.................................................. 161.000.00-1.00----------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................GACCTCCACGCCCTCCTAGA................................................. 201.000.00----------------------------------------------------------------------1.00-------------------------------------------------
.....................................................................................................................................................................................GACCTCCACGCCCTCCTCA.................................................. 191.000.00----------------------1.00-------------------------------------------------------------------------------------------------
........................................................................................................................................................................................CTCCACGCCCTCCTACTCC............................................... 190.670.00------------------------------------------------------------------------------------------------------------0.33---0.33-------
.....................................................................................................................................................................................TAGGAGGGCGTGGAGGTC................................................... 1820.500.50------------------------------------------------------------------------------------0.50-----------------------------------
....................................ACCCCGGGCCAGACCCGACGCGT............................................................................................................................................................................................... 2320.500.50---------------------0.50--------------------------------------------------------------------------------------------------
......................................................................................................................................................................................AGGAGGGCGTGGAGGT.................................................... 1650.400.40-0.40----------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................CTCCACGCCCTCCTACTC................................................ 180.330.00--------------------------------------------------------------------------------------------------------------0.33---------
..............................................................................................CCCTCTGGGGGGCCG............................................................................................................................................. 1530.330.33-----------------------------------------------------------------------------------------------------------------0.33------
.....................................................................................................................................................................................GACCTCCACGCCCTCGC.................................................... 170.250.00--------------------------------------------------------------------------------------------------------------------0.25---
.....................................................................................................................................................................................GACCTCCACGCCCTCGCG................................................... 180.250.00-------------------------------------------------------------------------------------------------------------------0.25----
.....................................................................................................................................................................................GACCTCCACGCCCTCCA.................................................... 170.250.00-------------------------------------------------------------------------0.25----------------------------------------------
......................................................................................................................................................................................ACCTCCACGCCCTCCTGTG................................................. 190.220.00---------------------------------------------------------------------------------------------------------------------0.22--
......................................................................................................................................................................................GGAGGGCGTGGAGGT..................................................... 1590.220.22--------------------0.11----------0.11----------------------------------------------------------------------------------------
......................................................................................................................................................................................ACCTCCACGCCCTCCTTA.................................................. 180.200.00----------------------------------------------------------------------------------------------------------------------0.20-
......................................................................................................................................................................................ACCTCCACGCCCTCCTTTT................................................. 190.200.00-----------------------------------------------------------------------------------------------------------------------0.20
......................................................................................................................................................................................ACCTCCACGCCCTCCTTTGT................................................ 200.200.00-0.20----------------------------------------------------------------------------------------------------------------------