uc004cmw.2_intron_4_0_chr9_140331204

GTGCCTTTGGTTGGATCACTGTCAACTACGGCTTGGGGACGCTGGTCAAGGTGCCACAGGCTGCCTGAGGGCGGGGGCTGGTCTGCGAGGGGCTGGTGTCTGGGGCTGGCTGACCGGGACGGGGTCCGGGTGGCTGCTCCCAGCTGAGTGGCCCCTTCTGTGCCCAGTACTCCTTCACTGGAGAATGGATCCAGCCTCCGGAGGAGATGCTGGTGGG
.......................................................................((((.((..((((.....))))..)).))))..((.((((.(((.((((...)))).)))))))))................................................................................
...................................................................68...................................................................137..............................................................................

Size

Perfect hit

Total Norm

Perfect Norm

GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)

SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)

GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)

GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)

SRR037944(GSM510482)
293DcrTN_cand5. (cell line)

GSM532876(GSM532876)
G547T. (cervix)

SRR037935(GSM510473)
293cand3. (cell line)

SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)

SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)

SRR444055(SRX128903)
Sample 27_2cDNABarcode: AF-PP-343: ACG CTC TT. (skin)

SRR444062(SRX128910)
Sample 27_3cDNABarcode: AF-PP-343: ACG CTC TT. (skin)

SRR029128(GSM416757)
H520. (cell line)

SRR444047(SRX128895)
Sample 27_1cDNABarcode: AF-PP-343: ACG CTC TT. (skin)

TAX577579(Rovira)
total RNA. (breast)

SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)

GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)

RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)

SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)

SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)

SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)

SRR207110(GSM721072)
Nuclear RNA. (cell line)

SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)

DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)

SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)

SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)

SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)

DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)

SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)

DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)

SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)

SRR191588(GSM715698)
52genomic small RNA (size selected RNA from t. (breast)

SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)

SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)

TAX577741(Rovira)
total RNA. (breast)

SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR191594(GSM715704)
70genomic small RNA (size selected RNA from t. (breast)

SRR038861(GSM458544)
MM466. (cell line)

SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)

SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)

SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)

SRR038859(GSM458542)
MM386. (cell line)

DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)

SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)

SRR029130(GSM416759)
DLD2. (cell line)

TAX577744(Rovira)
total RNA. (breast)

SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)

SRR191582(GSM715692)
95genomic small RNA (size selected RNA from t. (breast)

TAX577453(Rovira)
total RNA. (breast)

SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)

SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)

SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)

SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)

SRR029125(GSM416754)
U2OS. (cell line)

.................................................................................................................CCGGGACGGGGTCCGGGGAG....................................................................................

18.00

4.00

2.00

3.00

2.00

1.00

.................................................................................................................CCGGGACGGGGTCCGGGG......................................................................................

11.00

4.00

3.00

2.00

1.00

.................................................................................................................CCGGGACGGGGTCCGGG.......................................................................................

4.00

1.00

.................................................................................................................CCGGGACGGGGTCCGGGGA.....................................................................................

4.00

1.00

..................................................................................................................CGGGACGGGGTCCGGGGAGC...................................................................................

3.00

1.00

..................................................................................................................CGGGACGGGGTCCGGG.......................................................................................

3.00

2.00

1.00

..................................................................................................................CGGGACGGGGTCCGGGG......................................................................................

3.00

1.00

..................................................................................................................CGGGACGGGGTCCGGGGA.....................................................................................

3.00

1.00

.................................................................................................................CCGGGACGGGGTCCGGGGAA....................................................................................

2.00

4.00

1.00

..................................................................................................................CGGGACGGGGTCCGGT.......................................................................................

1.00

0.00

1.00

....CTTTGGTTGGATCACTGTCAACTACGGC.........................................................................................................................................................................................

1.00

........................................................................GGGGGCTGGTCTGCGGG................................................................................................................................

1.00

0.00

1.00

..................................................................................................................CGGGACGGGGTCCGGTGC.....................................................................................

1.00

0.00

1.00

..................................................................................................................CGGGACGGGGTCCGGGTAG....................................................................................

1.00

0.00

1.00

.................................................................TGAGGGCGGGGGCTGTGTG.....................................................................................................................................

1.00

0.00

1.00

.................................................................................................................CCGGGACGGGGTCCGCC.......................................................................................

1.00

0.00

1.00

.................................................................................................................CCGGGACGGGGTCCGGGGC.....................................................................................

1.00

4.00

1.00

...................................................................................................................GGGACGGGGTCCGGGGCGC...................................................................................

1.00

0.00

1.00

.................................................................................................................CCGGGACGGGGTCCGGGGAAT...................................................................................

1.00

4.00

1.00

.................................................................................TCTGCGAGGGGCTGGACCC.....................................................................................................................

1.00

0.00

1.00

...................................................................................................................GGGACGGGGTCCGGGGCG....................................................................................

1.00

0.00

1.00

.................................................................................................................CCGGGACGGGGTCCGCCG......................................................................................

1.00

0.00

1.00

.................................................................................................................CCGGGACGGGGTCCGGGGAGC...................................................................................

1.00

4.00

1.00

............................CGGCTTGGGGACGCTGG............................................................................................................................................................................

0.50

GTGCCTTTGGTTGGATCACTGTCAACTACGGCTTGGGGACGCTGGTCAAGGTGCCACAGGCTGCCTGAGGGCGGGGGCTGGTCTGCGAGGGGCTGGTGTCTGGGGCTGGCTGACCGGGACGGGGTCCGGGTGGCTGCTCCCAGCTGAGTGGCCCCTTCTGTGCCCAGTACTCCTTCACTGGAGAATGGATCCAGCCTCCGGAGGAGATGCTGGTGGG .......................................................................((((.((..((((.....))))..)).))))..((.((((.(((.((((...)))).)))))))))................................................................................ ...................................................................68...................................................................137..............................................................................	Size	Perfect hit	Total Norm	Perfect Norm	GSM956925Ago2(GSM956925) "cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)	SRR326279(GSM769509) cytoplasmic fraction was isolated using PARIS. (cell line)	GSM956925F181A(GSM956925) "cell line: HEK293 cell linepassages: 15-20ip. (cell line)	GSM956925Ago2D5(GSM956925) "cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)	SRR037944(GSM510482) 293DcrTN_cand5. (cell line)	GSM532876(GSM532876) G547T. (cervix)	SRR037935(GSM510473) 293cand3. (cell line)	SRR553572(SRX182778) source: Frontal Cortex. (Frontal Cortex)	SRR444058(SRX128906) Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)	SRR444055(SRX128903) Sample 27_2cDNABarcode: AF-PP-343: ACG CTC TT. (skin)	SRR444062(SRX128910) Sample 27_3cDNABarcode: AF-PP-343: ACG CTC TT. (skin)	SRR029128(GSM416757) H520. (cell line)	SRR444047(SRX128895) Sample 27_1cDNABarcode: AF-PP-343: ACG CTC TT. (skin)	TAX577579(Rovira) total RNA. (breast)	SRR330866(SRX091704) tissue: skin psoriatic involveddisease state:. (skin)	GSM450601(GSM450601) miRNA sequencing raw reads from post-mortem s. (brain)	RoviraIPAgo2(Rovira) total RNA. (ago2 breast)	SRR330867(SRX091705) tissue: skin psoriatic involveddisease state:. (skin)	SRR033712(GSM497057) Burkitt Lymphoma (BL510). (B cell)	SRR033718(GSM497063) Multiple Myeloma (U266). (B cell)	SRR207110(GSM721072) Nuclear RNA. (cell line)	SRR330879(SRX091717) tissue: skin psoriatic involveddisease state:. (skin)	DRR000555(DRX000313) "THP-1 whole cell RNA, no treatment". (cell line)	SRR330914(SRX091752) tissue: normal skindisease state: normal. (skin)	SRR039625(GSM531988) HBV(-) HCV(-) HCC Tissue Sample. (liver)	SRR330913(SRX091751) tissue: normal skindisease state: normal. (skin)	DRR000557(DRX000315) "THP-1 whole cell RNA, after 3 day treatment . (cell line)	SRR330863(SRX091701) tissue: skin psoriatic involveddisease state:. (skin)	DRR000556(DRX000314) "THP-1 whole cell RNA, after 3 day treatment . (cell line)	SRR330898(SRX091736) tissue: skin psoriatic uninvolveddisease stat. (skin)	SRR342901(SRX096797) small RNA seq of Left atrial tissue. (heart)	SRR191588(GSM715698) 52genomic small RNA (size selected RNA from t. (breast)	SRR553573(SRX182779) source: Cerebellum. (Cerebellum)	SRR330897(SRX091735) tissue: skin psoriatic uninvolveddisease stat. (skin)	SRR094132(GSM651908) small RNA(18-35nt)small RNA deep sequencing o. (uterus)	TAX577741(Rovira) total RNA. (breast)	SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR191594(GSM715704) 70genomic small RNA (size selected RNA from t. (breast)	SRR038861(GSM458544) MM466. (cell line)	SRR330871(SRX091709) tissue: skin psoriatic involveddisease state:. (skin)	SRR330899(SRX091737) tissue: skin psoriatic uninvolveddisease stat. (skin)	SRR330861(SRX091699) tissue: skin psoriatic involveddisease state:. (skin)	SRR330919(SRX091757) tissue: normal skindisease state: normal. (skin)	SRR038859(GSM458542) MM386. (cell line)	DRR001489(DRX001043) "Hela short nuclear cell fraction, control". (hela)	SRR033713(GSM497058) Burkitt Lymphoma (BL115). (B cell)	SRR029130(GSM416759) DLD2. (cell line)	TAX577744(Rovira) total RNA. (breast)	SRR326282(GSM769512) "Dicer mRNA was knocked down using siDicer, t. (cell line)	SRR191582(GSM715692) 95genomic small RNA (size selected RNA from t. (breast)	TAX577453(Rovira) total RNA. (breast)	SRR326280(GSM769510) total cell content of unperturbed cells was s. (cell line)	SRR326281(GSM769511) "Dicer mRNA was knocked down using siDicer, c. (cell line)	SRR191550(GSM715660) 27genomic small RNA (size selected RNA from t. (breast)	SRR033711(GSM497056) GCB DLBCL (GCB110). (B cell)	SRR029125(GSM416754) U2OS. (cell line)
...............................................AAGGTGCCACAGGCTGCAAT......................................................................................................................................................	20		5.00	0.00	-	-	-	-	-	-	-	-	-	2.00	1.00	-	2.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...............................................AAGGTGCCACAGGCTGCAAG......................................................................................................................................................	20		1.00	0.00	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
..GCCTTTGGTTGGATCACCCC...................................................................................................................................................................................................	20		1.00	0.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
....................................................................GGGCGGGGGCTGGTCTGCG..................................................................................................................................	19		1.00	0.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
..........AGCCGTAGTTGACAGTGATCCAA........................................................................................................................................................................................	23	1	1.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.............................................................................................................................................................................TGGATCCATTCTCCAGTGAA........................	20	1	1.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-