ID: uc004cli.1_intron_6_0_chr9_140051490_f.3p
GENE: GRIN1(7)
chr9:140052631-140052880+


(1)
B-CELL 		(14)
BRAIN 		(2)
BREAST 		(2)
CELL-LINE 		(1)
CERVIX 		(2)
OTHER 		(4)
SKIN

Sense strand
GTGTCCAGGGTCTGGCGTCTGCTGATCTTTCCGTTCTTGGGACTGGGACAAGGGAAAAGCCCAAGCTGCTCAGCCGGCAGGAGAAGGAGCAGGGAGAAGGAGCAGGGGGAAGGAGCAGGGAGAAGCAGCAGGGGGAAGGAGCAGGGAGGAGCAGGAGAAGGAGCATCTCTGAGAAGCCTCAGCTATGCTTCCTTCCCTAGAGTGCTGATGTCTTCCAAGTATGCGGATGGGGTGACTGGTCGCGTGGAGT
...................................................................................................................................((((......((((((...((..........)).)))))).....))))......................................................................
......................................................................................................................119...........................................................181...................................................................
SizePerfect hitTotal NormPerfect NormGSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577744(Rovira)
total RNA. (breast)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189784GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR189787SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR189785SRR040039(GSM532924)
G531T. (cervix)		SRR191401(GSM715511)
38genomic small RNA (size selected RNA from t. (breast)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
...........................................................................................................................................................AGAAGGAGCATCTCTGAGAAGC.........................................................................2219.009.002.00-1.002.00-3.00-------------1.00---------
...........................................................................................................................................................AGAAGGAGCATCTCTGAGAAGCCT.......................................................................2418.008.002.002.00--1.00--1.001.001.00-------------------
.......................................................................................................................................................CAGGAGAAGGAGCATCTCTGAG.............................................................................2217.007.001.002.001.001.001.00--------------------1.00---
...........................................................................................................................................................AGAAGGAGCATCTCTGAGAAG..........................................................................2116.006.001.001.00-1.001.00--1.00---1.00-----------------
.......................................................................................................................................................CAGGAGAAGGAGCATCTCTGA..............................................................................2114.004.00---1.00-1.001.00----1.00-----------------
......................................................................................................................................................GCAGGAGAAGGAGCATCTCTGA..............................................................................2214.004.00--2.001.00---1.00---------------------
........................................................................................................................................................AGGAGAAGGAGCATCTCTGA..............................................................................2014.004.00-1.003.00--------------------------
.......................................................................................................................................................CAGGAGAAGGAGCATCTCTG...............................................................................2013.003.001.001.001.00--------------------------
...........................................................................................................................................................AGAAGGAGCATCTCTGAGAAGCC........................................................................2313.003.001.00---------------1.00-------1.00----
...........................................................................................................................................................AGAAGGAGCATCTCTGAGAAGT.........................................................................2212.006.00------2.00----------------------
............................................................................................................................................................GAAGGAGCATCTCTGAGAAGCCT.......................................................................2312.002.001.00--1.00-------------------------
...........................................................................................................................................................AGAAGGAGCATCTCTGAGTAGC.........................................................................2211.001.00---1.00-------------------------
........................................................................................................................................................AGGAGAAGGAGCATCTCTGAA.............................................................................2111.004.00------1.00----------------------
...........................................................................................................................................................AGAAGGAGCATCTCTGAGAAGCCTT......................................................................2511.008.00--------------1.00--------------
.......................................................................................................................................................CAGGAGAAGGAGCATCTCGGA..............................................................................211.000.00-1.00---------------------------
............................................................................................................................................................................................................................ATGCGGATGGGGTGACTGGTCG........2211.001.00-1.00---------------------------
...........................................................................................................................AGCAGCAGGGGGAAGGGCCG...........................................................................................................201.000.00----------1.00------------------
......................................................................................................................................................GCAGGAGAAGGAGCATC...................................................................................1711.001.00--1.00--------------------------
............................................................................................GGAGAAGGAGCAGGGGGAA...........................................................................................................................................1911.001.00-----------------------1.00-----
...........................................................................................................................................................AGAAGGAGCATCTCTGAGAAGCCA.......................................................................2411.003.00----1.00------------------------
...........................................................................................................................................................AGAAGGAGCATCTCTGAGAA...........................................................................2011.001.00-------1.00---------------------
......................................................................................................................................................GCAGGAGAAGGAGCATCTCTGAG.............................................................................2311.001.001.00----------------------------
..............GCGTCTGCTGATCTTTCTTT........................................................................................................................................................................................................................201.000.00-----------------1.00-----------
.......................................................................................................................................AAGGAGCAGGGAGGAGAAGG...............................................................................................201.000.00------------1.00----------------
...........................................................................................................................................................AGAAGGAGCATCTCTGAG.............................................................................1811.001.00---------1.00-------------------
...........................................................................................................................................................AGAAGGAGCATCTCTGAGAAGCCAT......................................................................2511.003.00----1.00------------------------
...........................................................................................................................................................AGAAGGAGCATCTCTGAGAAGCA........................................................................2311.009.00-1.00---------------------------
...........................................................................................................................................................AGAAGGAGCATCTCTGAGAGGT.........................................................................221.000.00---1.00-------------------------
.......................................................................................................................................................CAGGAGAAGGAGCATCTCTGAAA............................................................................2311.004.00----1.00------------------------
......................................................................................................................................................................................................................................GGTGACTGGTCGCGTGGAG.1911.001.001.00----------------------------
.......................................................................................................................................................CAGGAGAAGGAGCATCTCAGA..............................................................................211.000.00--------1.00--------------------
.......................................................................................................................................................CAGGAGAAGGAGCATCTCTGAGA............................................................................2311.001.00-----1.00-----------------------
...........................................................................................................................................................AGAAGGAGCATCTCTGAGAAGCCTCA.....................................................................2611.001.00----1.00------------------------
...........................................................................................................GGAAGGAGCAGGGAGAACAGT..........................................................................................................................211.000.00----------1.00------------------
...........................................................................................GGGAGAAGGAGCAGGTGAG............................................................................................................................................191.000.00----------------------1.00------
...........................................................................................................................................................AGAAGGAGCATCTCTGAGAAT..........................................................................2111.001.001.00----------------------------
........................................................................................................................................................AGGAGAAGGAGCATCTCTGAGA............................................................................2211.001.00-----1.00-----------------------
...........................................................................................................................................................AGAAGGAGCATCTCTGACATA..........................................................................211.000.00------1.00----------------------
..........................................................................CGGCAGGAGAAGGAGC................................................................................................................................................................1630.670.67--------------------------0.330.33-
......................................................................................GAGCAGGGAGAAGGAGC...................................................................................................................................................1760.170.17----------------------------0.17

Antisense strand
GTGTCCAGGGTCTGGCGTCTGCTGATCTTTCCGTTCTTGGGACTGGGACAAGGGAAAAGCCCAAGCTGCTCAGCCGGCAGGAGAAGGAGCAGGGAGAAGGAGCAGGGGGAAGGAGCAGGGAGAAGCAGCAGGGGGAAGGAGCAGGGAGGAGCAGGAGAAGGAGCATCTCTGAGAAGCCTCAGCTATGCTTCCTTCCCTAGAGTGCTGATGTCTTCCAAGTATGCGGATGGGGTGACTGGTCGCGTGGAGT
...................................................................................................................................((((......((((((...((..........)).)))))).....))))......................................................................
......................................................................................................................119...........................................................181...................................................................
SizePerfect hitTotal NormPerfect NormGSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577744(Rovira)
total RNA. (breast)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189784GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR189787SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR189785SRR040039(GSM532924)
G531T. (cervix)		SRR191401(GSM715511)
38genomic small RNA (size selected RNA from t. (breast)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
..........................................................................................................................AAGCAGCAGGGGGAAGGAACG........................................................................................................... 211.000.00-------------1.00---------------
.................................................................................................................................................................................CTCAGCTATGCTTCCTTCCCTAGA................................................. 241.000.00---------------1.00-------------
..........................................................GCCCAAGCTGCTCAGCTAC............................................................................................................................................................................. 191.000.00------------------1.00----------
..........................................................................................................................AAGCAGCAGGGGGAAGACG............................................................................................................. 191.000.00---------------------1.00-------
................................................................................................CTCCTTCCCCCTGCTCCTT....................................................................................................................................... 1911.001.00--------------------1.00--------
.......................................................AAAGCCCAAGCTGCTCACGG............................................................................................................................................................................... 200.330.00------------0.33----------------
.......................................................TGAGCAGCTTGGGCTTT.................................................................................................................................................................................. 1730.330.33------------0.33----------------