ID: uc004cjp.2_intron_1_0_chr9_139744043_f
GENE: (2)
chr9:139743993-139744514+


(3)
AGO2.ip
(5)
B-CELL
(7)
BRAIN
(9)
BREAST
(36)
CELL-LINE
(4)
CERVIX
(8)
HEART
(4)
HELA
(1)
KIDNEY
(5)
LIVER
(3)
OTHER
(1)
RRP40.ip
(29)
SKIN
(1)
UTERUS
(1)
XRN.ip

Sense strand
TGCAGAGAGCAAGGAGATCGTGCGCGGCTACAAGTGGGCTGAGTACCATGGTGAGGGCGGGACCTGCGGGCATGCCAGGGGCACGCCTGGCGAGGCGGGGGCGGGGCTGGCGGGACGGAGACGGGGCTGACGAGGCAGGGGCGGGGCTGGCGGGGCGGGGGCGGGGCTGCGGGCCGTAGCGGACTGCGCTCTGCTCCGAGTCCTGCCCCTGCTAGGTTTGACCCAGGCTGAGGTCCTGGGCGGGAAGGGCGTGACACGGCCTGACACCCTCCCCAGCAGTCTCCCAGTTCCCGCGCCCTCCCCGGTTCCACCCTCCTTCGCTCATTCATCCCTGTCCCAGCCTCAAGGGGCTTCGTCTCTCCTGGGGAAGGGGCTGTTCAGAGCTGGGATTTCAGACCCCTTCGGCTGGGAGTTCCTCCCGCGGCCTCCAAGGGCGGCCAGGGCACGTCCTGAGGCCGCCCTCCCATCCCAGCGGACATCTACGACAAAGTGTCGGGCGACATGCAGAAGCAAGGCTGCGAC
...................................................................................................................................................................................................................................................................................................................................................................................................................((.((((((........((((((((..((((((((....)).)))))))))))))).)))))).)).....................................................
....................................................................................................................................................................................................................................................................................................................................................................................................389................................................................................472................................................
SizePerfect hitTotal NormPerfect NormRoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR189782SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR390725(GSM850204)
small rna immunoprecipitated. (cell line)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577741(Rovira)
total RNA. (breast)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR189784DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037937(GSM510475)
293cand2. (cell line)
SRR189785SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532876(GSM532876)
G547T. (cervix)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR191552(GSM715662)
42genomic small RNA (size selected RNA from t. (breast)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR189787SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR038858(GSM458541)
MEL202. (cell line)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR029127(GSM416756)
A549. (cell line)
SRR191559(GSM715669)
65genomic small RNA (size selected RNA from t. (breast)
SRR037938(GSM510476)
293Red. (cell line)
GSM1105752CONTROL(GSM1105752)
small RNA sequencing data. (hela)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR040017(GSM532902)
G645T. (cervix)
GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577579(Rovira)
total RNA. (breast)
SRR038860(GSM458543)
MM426. (cell line)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR038863(GSM458546)
MM603. (cell line)
SRR444043(SRX128891)
Sample 4cDNABarcode: AF-PP-339: ACG CTC TTC C. (skin)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040035(GSM532920)
G001T. (cervix)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR191596(GSM715706)
73genomic small RNA (size selected RNA from t. (breast)
TAX577743(Rovira)
total RNA. (breast)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040014(GSM532899)
G623N. (cervix)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGTGTCGGGCGACATGCAGAAG............2414.004.00-1.00-2.00----------------1.00-----------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................CGGCCTGACACCCTCCCCAGCAGTCT................................................................................................................................................................................................................................................2613.003.00------------------------------3.00-------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGGCGACATGCAGAAGCA..........1913.003.00-----------------2.00--------------------------------------------------------------1.00-----------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTGTCGGGCGACATGCAG...............2013.003.00-----------------------3.00--------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAAAGTGTCGGGCGAC.....................1813.003.00-1.00------2.00-----------------------------------------------------------------------------------------------------------
...................GTGCGCGGCTACAAGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1613.003.00---------------------3.00----------------------------------------------------------------------------------------------
..........AAGGAGATCGTGCGCGGCTACAAGTGGGCTGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3213.003.003.00-------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGACAAAGTGTCGGGCGACATGCAGA..............2812.002.00-----------2.00--------------------------------------------------------------------------------------------------------
...............................AAGTGGGCTGAGTACCATGCGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................222.000.00-----------------------------2.00--------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGGCCGCCCTCCCGAT......................................................182.000.00-------2.00------------------------------------------------------------------------------------------------------------
.........CAAGGAGATCGTGCGCGGCTACAAGTGGGCTGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3312.002.002.00-------------------------------------------------------------------------------------------------------------------
................................AGTGGGCTGAGTACCATGCG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................202.000.00---------------------------------------2.00----------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAAGTGTCGGGCGACATGCAGAAGCA..........2812.002.00--------------------1.00------------------------------------------1.00----------------------------------------------------
............GGAGATCGTGCGCGGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1612.002.00--------------2.00-----------------------------------------------------------------------------------------------------
..........AAGGAGATCGTGCGCGGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.002.00----------------------------------------1.00--------------------------------1.00------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGGCCGCCCTCCCGA.......................................................172.000.00-------2.00------------------------------------------------------------------------------------------------------------
..........AAGGAGATCGTGCGCGGCTACAAGTGGGCTGAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3312.002.001.00-1.00-----------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAGTGTCGGGCGAC.....................1611.001.00--1.00-----------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................AGACCCCTTCGGCTGGG................................................................................................................1711.001.00--------------1.00-----------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................GCTGGGAGTTCCTCCCGCGGCCTC..............................................................................................2411.001.00------------------------------------------------------------------------1.00-------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTGTCGGGCGACATGCA................1911.001.00--------------------------------------------------------------------------1.00-----------------------------------------
.....AGAGCAAGGAGATCGTGCGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001.00----------------------------------------------------------1.00---------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGTCGGGCGACATG..................1611.001.00--------------------------------------------1.00-----------------------------------------------------------------------
.....................................................AGGGCGGGACCTGCGGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001.00-------------------1.00------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................CTAGGTTTGACCCAGGCTGA...................................................................................................................................................................................................................................................................................................2011.001.00------------------------1.00-------------------------------------------------------------------------------------------
..CAGAGAGCAAGGAGATCGTGCGCGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001.00------1.00-------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGTCGGGCGACATGCA................1811.001.00-----1.00--------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAAGTGTCGGGCGACATGC.................2111.001.00------1.00-------------------------------------------------------------------------------------------------------------
................................................................................................................................................GGCTGGCGGGGCGGGGTGG.......................................................................................................................................................................................................................................................................................................................................................................191.000.00------------------------1.00-------------------------------------------------------------------------------------------
.....AGAGCAAGGAGATCGTGCGCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001.00--------------------------------------------------------1.00-----------------------------------------------------------
..........................................................................................................................................................................GGGCCGTAGCGGACTGCGC.............................................................................................................................................................................................................................................................................................................................................1911.001.00-----------------------------------------------------------------------------------------1.00--------------------------
.......AGCAAGGAGATCGTGCGCGGCTAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001.00-----------------------------------------------------------------------------------1.00--------------------------------
....GAGAGCAAGGAGATCGTGCGCGGCTACAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001.00-1.00------------------------------------------------------------------------------------------------------------------
.........CAAGGAGATCGTGCGCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.001.00-------------------------1.00------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................AGGCTGAGGTCCTGGGCGGGAAGGGCGTGACAC.........................................................................................................................................................................................................................................................................3311.001.00--1.00-----------------------------------------------------------------------------------------------------------------
........................CGGCTACAAGTGGGCTGAGTACCATG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001.00----------------------------------1.00---------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCTACGACAAAGTGTCGGGCGACATGCAG...............3111.001.00------------------------------------------------------------------------------1.00-------------------------------------
.............................................................................................................................................................................................TCTGCTCCGAGTCCTGCCCCTGC......................................................................................................................................................................................................................................................................................................................2311.001.00-------------------1.00------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGGCGACATGCAGAAGCAAG........2111.001.00---1.00----------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTGTCGGGCGACATGCAGAAGCAA.........2611.001.00-------------------------------------------------------1.00------------------------------------------------------------
...........AGGAGATCGTGCGCGGCTA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001.00--------1.00-----------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGGCGACATGCAGAAGC...........1811.001.001.00-------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................TCTCCTGGGGAAGGGGCTGCTCC..............................................................................................................................................231.000.00--------------------------1.00-----------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTACGACAAAGTGTCGGGCGAC.....................2311.001.00--------------------------------1.00-----------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAGGCCGCCCTCCCATCCCAGCG................................................2511.001.00------------------------------------------------------------------------------------------1.00-------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAAAGTGTCGGGCGACATG..................2111.001.00------1.00-------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGACAAAGTGTCGGGCGACATGCAGA..............2711.001.00----------------------------------------------------1.00---------------------------------------------------------------
..............................................................................................................................................................................................CTGCTCCGAGTCCTGCCCCTGCAA....................................................................................................................................................................................................................................................................................................................241.000.00-----------1.00--------------------------------------------------------------------------------------------------------
...............................................................................................................................................................GGCGGGGCTGCGGGCCGGTC.......................................................................................................................................................................................................................................................................................................................................................201.000.00----------------------------1.00---------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAGTGTCGGGCGACATGCAGAAGCAAGGCTG....3311.001.00--1.00-----------------------------------------------------------------------------------------------------------------
............................................................................................................................................GCGGGGCTGGCGGGG...............................................................................................................................................................................................................................................................................................................................................................................1501.001.00-------------1.00------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................CCTGGGGAAGGGGCTGTTAA..............................................................................................................................................201.000.00-------------------------------------------------------------1.00------------------------------------------------------
......................................................................................................................................................................................................................................AGGTCCTGGGCGGGAAGGG.................................................................................................................................................................................................................................................................................1911.001.00------------------------------------------------------------------------------------------------1.00-------------------
............GGAGATCGTGCGCGGCTACAAGTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001.00---------------------------1.00----------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAGTGTCGGGCGACATGCAGA..............2311.001.00--------------------------------1.00-----------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTCGGGCGACATGCAGG..............191.000.00-------------------------1.00------------------------------------------------------------------------------------------
............................................................................................................................................................GGGGGCGGGGCTGCGAA.............................................................................................................................................................................................................................................................................................................................................................171.000.00-------------------------------------------------1.00------------------------------------------------------------------
.......AGCAAGGAGATCGTGCGCGGCTCCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001.00-----------------------------------------1.00--------------------------------------------------------------------------
...........................................................................................................................................................CGGGGGCGGGGCTGCAAA.............................................................................................................................................................................................................................................................................................................................................................181.000.00-------------------------------------1.00------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGGCGACATGCAGAAGCAAGGCT.....2411.001.00--1.00-----------------------------------------------------------------------------------------------------------------
.GCAGAGAGCAAGGAGATCGTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001.00-----1.00--------------------------------------------------------------------------------------------------------------
............GGAGATCGTGCGCGGCTACAAGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001.00---------1.00----------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGTGTCGGGCGACATGCAG...............2111.001.00---------------------------------------------------------------------------1.00----------------------------------------
..................................................................................................................................................................................................................................................................................................................................CATTCATCCCTGTCCCAGCA....................................................................................................................................................................................201.000.00-------------------------------1.00------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGGACATCTACGACAAA.................................1911.001.00----------1.00---------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGACAAAGTGTCGGGCGACATGCAGAAG............2911.001.00-----------1.00--------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTGAGGCCGCCCTCCCATC......................................................2111.001.00-------------------------------------------------------------------------------------1.00------------------------------
...............................AAGTGGGCTGAGTACC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1611.001.00--------------------1.00-----------------------------------------------------------------------------------------------
......................................................................................................................................................CGGGGCGGGGGCGGGGCTGCGG..............................................................................................................................................................................................................................................................................................................................................................2211.001.00-------------------1.00------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................GGCGTGACACGGCCTGAA.................................................................................................................................................................................................................................................................181.000.00-----------------------------------------------------------------------------------------------1.00--------------------
..............................................................................................................CGGGACGGAGACGGGGCTGAC.......................................................................................................................................................................................................................................................................................................................................................................................................2111.001.00----------------1.00---------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACAAAGTGTCGGGCGACATGCAGAAGCAAGG.......3311.001.00--------------------------------------------------1.00-----------------------------------------------------------------
.....AGAGCAAGGAGATCGTGCGCGGCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001.00--------1.00-----------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGCCAGGGCACGTCCTGAGGC..................................................................2211.001.00-------------------------------------1.00------------------------------------------------------------------------------
.........................................................................................................................CGGGGCTGACGAGGCATTG..............................................................................................................................................................................................................................................................................................................................................................................................191.000.00----------------------------------------------------------------1.00---------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACGACAAAGTGTCGGGCGACATG..................2511.001.00----------1.00---------------------------------------------------------------------------------------------------------
.............................................................................................................................................CGGGGCTGGCGGGGCGC............................................................................................................................................................................................................................................................................................................................................................................171.000.00----------------1.00---------------------------------------------------------------------------------------------------
.......AGCAAGGAGATCGTGCGCGGCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001.00--------1.00-----------------------------------------------------------------------------------------------------------
...................GTGCGCGGCTACAAGTGGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001.00---------------------------------------------1.00----------------------------------------------------------------------
.....................................................................................................................................................................................................................................GAGGTCCTGGGCGGGAAGGGC................................................................................................................................................................................................................................................................................2111.001.00-----------------------------------1.00--------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCCAGCGGACATCTACGAC....................................2111.001.00---------------------------1.00----------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................ACACGGCCTGACACCCTCCCCAGCAGT..................................................................................................................................................................................................................................................2711.001.00----------------------------------------------------------------------------------1.00---------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCGGCCTCCAAGGGCGGCCAGGGCACGTC.........................................................................3111.001.00---1.00----------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................GCTGAGGTCCTGGGCGGGT.....................................................................................................................................................................................................................................................................................191.000.00----------------------------------------------------------------------1.00---------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTCGGGCGACATGCAGA..............1911.001.00----------------------1.00---------------------------------------------------------------------------------------------
............................TACAAGTGGGCTGAGTAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001.00-1.00------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................CGTAGCGGACTGCGCACGG.........................................................................................................................................................................................................................................................................................................................................191.000.00---------------------------------------------------------------------------------1.00----------------------------------
..............................................................................................................CGGGACGGAGACGGGGACA.........................................................................................................................................................................................................................................................................................................................................................................................................191.000.00---------------------------------------------------------------------1.00----------------------------------------------
.....AGAGCAAGGAGATCGTGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001.00-----------------------------------1.00--------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................CTGGGCGGGAAGGGCGTG.............................................................................................................................................................................................................................................................................1811.001.00----------------------------------------------------------------------------1.00---------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTGTCGGGCGACATGCAGAAGCA..........2511.001.00---1.00----------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................CGGACTGCGCTCTGCTCCGAGT.................................................................................................................................................................................................................................................................................................................................2211.001.00-----------------------------------------------------1.00--------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTGTCGGGCGACATGCAGAAGCAAGGCT.....3011.001.00---1.00----------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGACAAAGTGTCGGGCGACATGCAGAAGCAA.........3211.001.00------1.00-------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAAGTGTCGGGCGACATGCAGAAG............2611.001.00-1.00------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................GGCGGGGCGGGGGCGGG.....................................................................................................................................................................................................................................................................................................................................................................1701.001.00---------------------------------------------------------------------------------------------1.00----------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAAAGTGTCGGGCTACA....................191.000.00-----1.00--------------------------------------------------------------------------------------------------------------
.............GAGATCGTGCGCGGCTAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001.00-------------------------------------------------------------------------------1.00------------------------------------
......................................................................................................................................................................................................................................................................GACACCCTCCCCAGCAGTCTCCCA............................................................................................................................................................................................................................................2411.001.00-1.00------------------------------------------------------------------------------------------------------------------
............................TACAAGTGGGCTGAGAGGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................191.000.00-----------------------------------------------------------1.00--------------------------------------------------------
....................................................................................................................GGAGACGGGGCTGACAGCA...................................................................................................................................................................................................................................................................................................................................................................................................191.000.00------------1.00-------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGGCCGCCCTCCCTA.......................................................171.000.00-------1.00------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................CTCCCAGTTCCCGCGCCCTCC.............................................................................................................................................................................................................................2111.001.00-1.00------------------------------------------------------------------------------------------------------------------
...AGAGAGCAAGGAGATAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................171.000.00-----------------------------------------1.00--------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAAAGTGTCGGGCGGCAT...................201.000.00-----1.00--------------------------------------------------------------------------------------------------------------
........GCAAGGAGATCGTGCGCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001.00----------------------1.00---------------------------------------------------------------------------------------------
...........................................TACCATGGTGAGGGCGGGACCTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001.00---------------1.00----------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................................CTCCCGCGGCCTCCAAG..........................................................................................1711.001.00-------------1.00------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................CCCGCGCCCTCCCCGGCAGC.....................................................................................................................................................................................................................201.000.00---------------------------------1.00----------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCCCAGCGGACATCTACGAC....................................2211.001.00--1.00-----------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTGTCGGGCGACATGCAGAAGC...........2411.001.001.00-------------------------------------------------------------------------------------------------------------------
............................TACAAGTGGGCTGAGTACC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001.00-1.00------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................AGGTCCTGGGCGGGAAGG..................................................................................................................................................................................................................................................................................1811.001.00---------------1.00----------------------------------------------------------------------------------------------------
.....AGAGCAAGGAGATCGTGCGCGGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001.00---------------------------1.00----------------------------------------------------------------------------------------
...............................................................................GGCACGCCTGGCGAGGCGGGGGCGG..................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001.00--------------------------------------------------------------------------------------------1.00-----------------------
.....................................................................................................................................................................................................................................................................TGACACCCTCCCCAGCAGTCTCCC.............................................................................................................................................................................................................................................2411.001.00---1.00----------------------------------------------------------------------------------------------------------------
..........AAGGAGATCGTGCGCGGCTACAAGTGGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001.001.00-------------------------------------------------------------------------------------------------------------------
.GCAGAGAGCAAGGAGGAGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................191.000.00-------------------------------------------------------------------------------------------1.00------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCTACGACAAAGTGTCGGGC........................2211.001.00-----------------------------------------------------------------1.00--------------------------------------------------
.........CAAGGAGATCGTGCGCGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001.00------1.00-------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................GGGCGGGAAGGGCGTTGAC..........................................................................................................................................................................................................................................................................191.000.00--------------------------------------------------------------1.00-----------------------------------------------------
....................................................................................................................GGAGACGGGGCTGACGGCC...................................................................................................................................................................................................................................................................................................................................................................................................191.000.00------------1.00-------------------------------------------------------------------------------------------------------
.................................................................GCGGGCATGCCAGGGGCACGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001.00------------1.00-------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................ACCCCTTCGGCTGGGAG..............................................................................................................1711.001.00----------------1.00---------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................AGGTCCTGGGCGGGAAGGGCGTGAC...........................................................................................................................................................................................................................................................................2511.001.00------------------------------------------------------------------1.00-------------------------------------------------
............GGAGATCGTGCGCGGCTACAAGTGGGCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001.00--1.00-----------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAAGTGTCGGGCGACATGCAGAAGC...........2711.001.00-1.00------------------------------------------------------------------------------------------------------------------
.........CAAGGAGATCGTGCGCGGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001.00----------------------------------------------------------------------------------------------1.00---------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAAGTGTCGGGCGACATGCAGAAGCAAGGCTG....3411.001.00--1.00-----------------------------------------------------------------------------------------------------------------
...........AGGAGATCGTGCGCGGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.001.00-----1.00--------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACGACAAAGTGTCGGGCGACA....................2311.001.00-----------------1.00--------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................................GTTCCTCCCGCGGCCCCGG............................................................................................191.000.00------------------------------------1.00-------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................GCGGGAAGGGCGTGACACGG.......................................................................................................................................................................................................................................................................2011.001.00---------------------------------------------------------------------------------------1.00----------------------------
...........................CTACAAGTGGGCTGAGTA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001.00----------------------1.00---------------------------------------------------------------------------------------------
....GAGAGCAAGGAGATCGTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001.00------------------------------------------------------------1.00-------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGACATCTACGACAAAGTG..............................2111.001.00--------------------------------------------------------------------1.00-----------------------------------------------
................................................................................................................................................................................................................................................CGGGAAGGGCGTGACAC.........................................................................................................................................................................................................................................................................1711.001.00------------------1.00-------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................TGACACCCTCCCCAGCA....................................................................................................................................................................................................................................................1730.670.67-0.67------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................GTCTCTCCTGGGGAAGGG......................................................................................................................................................1830.670.67------------0.67-------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................CCCTCCCCAGCAGTCTCCC.............................................................................................................................................................................................................................................1920.500.50----0.50---------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................CCCTCCTTCGCTCATT....................................................................................................................................................................................................1620.500.50-----------------------------------------------------------------------------------------------------0.50--------------
................................AGTGGGCTGAGTACCAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1720.500.50----------------------------------------------------------------------------------------------------0.50---------------
...AGAGAGCAAGGAGATCG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1720.500.50-----0.50--------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................GTTTGACCCAGGCTGAG..................................................................................................................................................................................................................................................................................................1720.500.50---------------------------------------------------------------------------------------------------0.50----------------
.................................GTGGGCTGAGTACCATGCGGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2130.330.33------------------------------------------------------------------------------------0.33-------------------------------
.................................GTGGGCTGAGTACCATG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1730.330.33-------------------------------------------------------------------------------------------------------0.33------------
......................................................................................................................................................................................................................................................................................................................................................................CTCCTGGGGAAGGGGCT...................................................................................................................................................1750.200.20-------------------------------------------------0.20------------------------------------------------------------------
.....................................................................................................CGGGGCTGGCGGGAC......................................................................................................................................................................................................................................................................................................................................................................................................................1560.170.17--------------------------------------------------0.17-----------------------------------------------------------------
........................................................GCGGGACCTGCGGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................1570.140.14----------------0.14---------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................GGGGCTGTTCAGAGC..........................................................................................................................................1570.140.14------------------------------------------------------------------------------------------------------------------0.14-
...................................................................................................................................................................................................................................................................................................................CCACCCTCCTTCGCT........................................................................................................................................................................................................1580.120.12---------------------------------------------------0.12----------------------------------------------------------------

Antisense strand
TGCAGAGAGCAAGGAGATCGTGCGCGGCTACAAGTGGGCTGAGTACCATGGTGAGGGCGGGACCTGCGGGCATGCCAGGGGCACGCCTGGCGAGGCGGGGGCGGGGCTGGCGGGACGGAGACGGGGCTGACGAGGCAGGGGCGGGGCTGGCGGGGCGGGGGCGGGGCTGCGGGCCGTAGCGGACTGCGCTCTGCTCCGAGTCCTGCCCCTGCTAGGTTTGACCCAGGCTGAGGTCCTGGGCGGGAAGGGCGTGACACGGCCTGACACCCTCCCCAGCAGTCTCCCAGTTCCCGCGCCCTCCCCGGTTCCACCCTCCTTCGCTCATTCATCCCTGTCCCAGCCTCAAGGGGCTTCGTCTCTCCTGGGGAAGGGGCTGTTCAGAGCTGGGATTTCAGACCCCTTCGGCTGGGAGTTCCTCCCGCGGCCTCCAAGGGCGGCCAGGGCACGTCCTGAGGCCGCCCTCCCATCCCAGCGGACATCTACGACAAAGTGTCGGGCGACATGCAGAAGCAAGGCTGCGAC
...................................................................................................................................................................................................................................................................................................................................................................................................................((.((((((........((((((((..((((((((....)).)))))))))))))).)))))).)).....................................................
....................................................................................................................................................................................................................................................................................................................................................................................................389................................................................................472................................................
SizePerfect hitTotal NormPerfect NormRoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR189782SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR390725(GSM850204)
small rna immunoprecipitated. (cell line)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577741(Rovira)
total RNA. (breast)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR189784DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037937(GSM510475)
293cand2. (cell line)
SRR189785SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532876(GSM532876)
G547T. (cervix)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR191552(GSM715662)
42genomic small RNA (size selected RNA from t. (breast)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR189787SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR038858(GSM458541)
MEL202. (cell line)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR029127(GSM416756)
A549. (cell line)
SRR191559(GSM715669)
65genomic small RNA (size selected RNA from t. (breast)
SRR037938(GSM510476)
293Red. (cell line)
GSM1105752CONTROL(GSM1105752)
small RNA sequencing data. (hela)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR040017(GSM532902)
G645T. (cervix)
GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577579(Rovira)
total RNA. (breast)
SRR038860(GSM458543)
MM426. (cell line)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR038863(GSM458546)
MM603. (cell line)
SRR444043(SRX128891)
Sample 4cDNABarcode: AF-PP-339: ACG CTC TTC C. (skin)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040035(GSM532920)
G001T. (cervix)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR191596(GSM715706)
73genomic small RNA (size selected RNA from t. (breast)
TAX577743(Rovira)
total RNA. (breast)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040014(GSM532899)
G623N. (cervix)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
.......................................................................................................................................................................................................................................................................................................................................................................................GTTCAGAGCTGGGATTTCTG............................................................................................................................... 204.000.001.00-----1.00---------------------1.00-------------1.00-------------------------------------------------------------------------
...............................................................................................................GGGACGGAGACGGGGCCGG........................................................................................................................................................................................................................................................................................................................................................................................................ 192.500.00------0.25------------------------0.75--------------0.25---------------------------------------------------0.25-----0.25-0.25---0.25-0.25---
..........................................................................................................................................................................................CCTAGCAGGGGCAGGACTCGGAGCAGAGCG.................................................................................................................................................................................................................................................................................................................. 3012.002.00---------2.00----------------------------------------------------------------------------------------------------------
........................................................................................................................................CCCCCGCCCCGCCAGCCCCGCCCCT......................................................................................................................................................................................................................................................................................................................................................................... 2512.002.00------------------------1.00-----------1.00-------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................CTGGGAGACTGCTGGGGAGGG........................................................................................................................................................................................................................................... 2112.002.00-------------------------------------------2.00------------------------------------------------------------------------
....CACGATCTCCTTGCTCTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 1812.002.00----2.00---------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................AGGACTCGGAGCAGAGCGCAGTC.............................................................................................................................................................................................................................................................................................................................. 2311.001.00------------------1.00-------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCCTCCCATCCCAAT................................................. 171.000.00-------------------------------------------------------------------------------------------------1.00------------------
........................................................................................................................................................................................................................................................................................................................................................................................................CAGACCCCTTCGGCTGGGAGTTT........................................................................................................... 231.000.00---------------------------------------------------1.00----------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................GTTCAGAGCTGGGATTTCATCTG............................................................................................................................ 231.000.00------------------------------------------1.00-------------------------------------------------------------------------
.......................................................................................................................................................................................CTGCGCTCTGCTCCGACGG................................................................................................................................................................................................................................................................................................................................ 191.000.00--------------------------------------1.00-----------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCGCCCTCCCATCCCAGCGGACATCC......................................... 281.000.00--------------------------1.00-----------------------------------------------------------------------------------------
.........................................................................................................................................................................................GGGCAGGACTCGGAGCAGAGCGC.......................................................................................................................................................................................................................................................................................................................... 2311.001.00-------------1.00------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................GCAGGACTCGGAGCAGAGCG............................................................................................................................................................................................................................................................................................................................ 2011.001.00----------------------------------------1.00---------------------------------------------------------------------------
.........................................................................................................................................................................................CAGGACTCGGAGCAGAGCGC............................................................................................................................................................................................................................................................................................................................. 2011.001.00-----------------------------1.00--------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................ATCCCTGTCCCAGCCTCG................................................................................................................................................................................. 181.000.00-----1.00--------------------------------------------------------------------------------------------------------------
.....................CACTTGTAGCCGCGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 1511.001.00----1.00---------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................CAGGACTCGGAGCAGAGCGCAG............................................................................................................................................................................................................................................................................................................................. 2211.001.00----------------------------------------------1.00---------------------------------------------------------------------
.............................................................................................................................................................................................CAGGGGCAGGACTCGGAGCAGA....................................................................................................................................................................................................................................................................................................................... 2211.001.00-------------------------------------------------------------------1.00------------------------------------------------
..................................................................................................................................................................................................AGCAGGGGCAGGACTCGGA..................................................................................................................................................................................................................................................................................................................... 1911.001.00----------1.00---------------------------------------------------------------------------------------------------------
....................................CTCACCATGGTACTCAGCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 1911.001.00------------------------------------------------1.00-------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................GATGAATGAGCGAAGGAGG................................................................................................................................................................................................ 1911.001.00--------------------------------------------------------------------------------------1.00-----------------------------
...................CACTTGTAGCCGCGCAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 1711.001.00---------------1.00----------------------------------------------------------------------------------------------------
...............................................................................................................GGGACGGAGACGGGGCCG......................................................................................................................................................................................................................................................................................................................................................................................................... 181.000.00------------------------------------------------0.25-------------------------------------------------0.25--------0.250.25-------
.......................CTCAGCCCACTTGTAGCCGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 2011.001.00------------------------------------------------------1.00-------------------------------------------------------------
..................ATGGTACTCAGCCCACTTGTAGCCGCGCACG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 3111.001.00-----------------------------------------------1.00--------------------------------------------------------------------
..............................................................................................CCGTCCCGCCAGCCCCGCCCCCGC.................................................................................................................................................................................................................................................................................................................................................................................................................... 2411.001.00---------------------------------------------------------1.00----------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................CCAGGAGAGACGAAGCCCCTTGAGG............................................................................................................................................................. 2511.001.00-------------------------------1.00------------------------------------------------------------------------------------
..............................................................................................................................................................................................ACCTAGCAGGGGCAGGACTCGGAGCAG................................................................................................................................................................................................................................................................................................................. 2711.001.00--------------------------1.00-----------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................ATGAATGAGCGAAGGAGGGTGGAAC................................................................................................................................................................................................. 2511.001.00----------------------------------------------------------------------------------------1.00---------------------------
.CACGATCTCCTTGCTCTCTGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 2111.001.00----------------------------------1.00---------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGCCGCCCTCCCACTAG.................................................... 191.000.00---------------------------------1.00----------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................GGTTCCACCCTCCTTAGC......................................................................................................................................................................................................... 181.000.001.00-------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................CAAACCTAGCAGGGGCAGGACTCGGAG.............................................................................................................................................................................................................................................................................................................. 2711.001.00----------1.00---------------------------------------------------------------------------------------------------------
........................................................................................................................................CCCCGCCCCGCCAGCCCCGCCCCT.......................................................................................................................................................................................................................................................................................................................................................................... 2411.001.00----------------------------1.00---------------------------------------------------------------------------------------
........................CAGCCCACTTGTAGCCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 1711.001.00----1.00---------------------------------------------------------------------------------------------------------------
..................AGCCCACTTGTAGCCGCGCACG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 2211.001.00--------------------------------------1.00-----------------------------------------------------------------------------
............AGCCCACTTGTAGCCGCGCACGATCTCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 2811.001.00----1.00---------------------------------------------------------------------------------------------------------------
.....................CCACTTGTAGCCGCGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 1611.001.00----1.00---------------------------------------------------------------------------------------------------------------
.........................ACTCAGCCCACTTGTAGCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 1911.001.00-----------------------------------------------------------------------1.00--------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................TCCTCCCGCGGCCTCCCG........................................................................................... 181.000.00-----------------------------------------------------------------------------1.00--------------------------------------
.....................................................................................................................................................................................GACTGCGCTCTGCTCCTC................................................................................................................................................................................................................................................................................................................................... 181.000.00-------------------------1.00------------------------------------------------------------------------------------------
.......................TACTCAGCCCACTTGTAGCCGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 2211.001.00---------1.00----------------------------------------------------------------------------------------------------------
....................CCACTTGTAGCCGCGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 1711.001.00------------------1.00-------------------------------------------------------------------------------------------------
...............................................................................................................CCCCGTCTCCGTCCC............................................................................................................................................................................................................................................................................................................................................................................................................ 1540.750.75-----------------------------------------------0.25-------------------------------------------------------------0.25-0.25----
...........................................................................................................................................CCCGCCCCGCCAGCCCCGCC........................................................................................................................................................................................................................................................................................................................................................................... 2020.500.50------------------------------------------------------------------------------------------------------0.50-------------
......................................................................................................................................................................................................................................................................................GCGGGAACTGGGAGAC.................................................................................................................................................................................................................................... 1620.500.50-------------0.50------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................AGGACTCGGAGCAGAGC.............................................................................................................................................................................................................................................................................................................................. 1720.500.50--------------------------------------------0.50-----------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGGGATGGGAGGGCGG................................................. 1820.500.50---------------------------------------------0.50----------------------------------------------------------------------
.....................................................CGCAGGTCCCGCCCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 1520.500.50--------------0.50-----------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................CAGGACTCGGAGCAGAGC............................................................................................................................................................................................................................................................................................................................. 1820.500.50------------------------------------------------------------------------------------0.50-------------------------------
............................................................................................................................................................................................AGGACTCGGAGCAGAG.............................................................................................................................................................................................................................................................................................................................. 1620.500.50--------------------------------0.50-----------------------------------------------------------------------------------
...............................................................................................................GGGACGGAGACGGGGCC.......................................................................................................................................................................................................................................................................................................................................................................................................... 170.250.00---------------0.25----------------------------------------------------------------------------------------------------
...............................................................................................................GGGACGGAGACGGGGCGGC........................................................................................................................................................................................................................................................................................................................................................................................................ 190.250.00---------------------------------------------------------------------------------------------------------0.25----------
...GATCTCCTTGCTCTCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 1660.170.17-----------------------------------------------------------------------------------------------------------------0.17--
.............................................................................................................................................................................................AGGACTCGGAGCAGA.............................................................................................................................................................................................................................................................................................................................. 1560.170.17------------------------------------------------------------------------------------0.17-------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................TCTGAACAGCCCCTT............................................................................................................................................ 1570.140.14-------------------------------------------------------------------------------------------------------------------0.14