ID: uc004chv.3_intron_24_0_chr9_139360915_r
GENE: (5)
chr9:139360865-139361458-


(1)
AGO1.ip 		(1)
AGO2.ip 		(3)
B-CELL 		(4)
BRAIN 		(3)
BREAST 		(11)
CELL-LINE 		(2)
CERVIX 		(1)
FIBROBLAST 		(4)
HELA 		(10)
LIVER 		(3)
OTHER 		(12)
SKIN 		(1)
TESTES 		(1)
XRN.ip

Sense strand
GATGCAGAGTATGACGCATACAGGAGAGAGCACTCTGCCTTCGGGGACAGGTTGGTGGAGCACCCCTGGGGAGGCAGAGGCTGGGGGCAGCCAGGGCGCGCTAGTGCTTCTCTGCCCTCATGTCTGGGTTTTAACAAAGAGCTGTGGTAGTTTGGGTGAGCATCTGCCTGATGTTTTGGTCCCTGTCTGAAAGGAAGGAGGGAGCAGACCCTCCCAGGGTTCCCAGCTTGGACTGTTAGAGGAGAACTGGCCTCAGCAAGAGGACTGTTCAGCACCTCTGGGAGCACCTGGGAGATTGGGCTCACTCTTTCTCATCGTCCCTTCTTACCGGTCGCGCCCTGCAGCCCAGAGAAGTGACCACACTGGAGACGCATTCGCAGTACTTCTCTAACGTTGCACGTCAGAGGGCCCTGAGTGTCGGGTGTGCTGTGTTGTGCCTCGGCCCCAGGGGTCTCGGTCTCAGCTCCTGGGCAGCTGCGTGGCACATGGGGACGGGGCCTCCGGCACTCCCATTCCTCTGCCTCTGTCCCCCGGCTTCCTCTAGGCCCGAGAAACGTGACAACAACTGGAGGTACGATCCTCGCTTCACGGGGA
......................................................................................................................................................................................((((..(((.((((((((.((((.....((((((((((((((((...((.((.....))..((((...((((.....))))...))))....)).)))))))).)))))))).....)))).))))))))...((((((........((((((...(((.....)))....)))))).....)).))))..)))))))......................................................................................................................................................................................................................
...................................................................................................................................................................................180...........................................................................................................................................................................................................386..............................................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR189784GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR189787DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR553576(SRX182782)
source: Testis. (testes)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR189783GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR040039(GSM532924)
G531T. (cervix)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM359197(GSM359197)
hepg2_depl_cip_tap. (cell line)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR189785SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR040025(GSM532910)
G613T. (cervix)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		GSM359196(GSM359196)
m3m7G_ip. (cell line)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR038852(GSM458535)
QF1160MB. (cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
........................................................................................................................................................................................GTCTGAAAGGAAGGAGGGAGCA....................................................................................................................................................................................................................................................................................................................................................................................................2214.004.004.00---------------------------------------------------------
...............................................................................................................................................................................TTGGTCCCTGTCTGAAAGGAAGGAGGGAGCAGACCCTCCCAGGGTTCCCAGCTTGGACTGTTAGAGGAGAACTGGCCTCAGCAAGAGGACTGT......................................................................................................................................................................................................................................................................................................................................9313.003.00--------3.00-------------------------------------------------
..........ATGACGCATACAGGAGAGAGCACTCTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.002.00--------------2.00-------------------------------------------
......................GGAGAGAGCACTCTGCCTTCGGGGACAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.002.00------------------------------1.00----------------1.00----------
........................................................................................................................................................................................................................................................................................................................................................................CACTGGAGACGCATTCGCAGTA....................................................................................................................................................................................................................2212.002.002.00---------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................TTCGCAGTACTTCTCTAACGTTG......................................................................................................................................................................................................2312.002.00-----2.00----------------------------------------------------
................CATACAGGAGAGAGCACTCTGCCTTCGGGGACAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3412.002.00---------------2.00------------------------------------------
..................................................................................................CGCTAGTGCTTCTCTCTCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................192.000.00---------------------2.00------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGTGACAACAACTGGAGGTACG..................2311.001.00-1.00--------------------------------------------------------
..........ATGACGCATACAGGAGAGAGCACTCTGCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001.00-1.00--------------------------------------------------------
............................................................................................................................................................................................GAAAGGAAGGAGGGAGCAG...................................................................................................................................................................................................................................................................................................................................................................................................1911.001.00-1.00--------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGAAACGTGACAACAACTGGAGGT.....................2611.001.00---------1.00------------------------------------------------
......................................................................GAGGCAGAGGCTGGGGGGAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................201.000.00-------1.00--------------------------------------------------
............GACGCATACAGGAGAGAGCAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001.00-------------------1.00--------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCTCCGGCACTCCCACCC...............................................................................191.000.00----------------------------------------------1.00-----------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAAACGTGACAACAACTGGAGGTACGAT................3011.001.00-1.00--------------------------------------------------------
.........................................................................................................................................................................GATGTTTTGGTCCCTGTCTGAAAGGAAGGA...........................................................................................................................................................................................................................................................................................................................................................................................................3011.001.00----1.00-----------------------------------------------------
.............ACGCATACAGGAGAGAGCACT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001.00------1.00---------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGGGGACGGGGCCTCCGGCAAA......................................................................................241.000.00----------------------------1.00-----------------------------
..............................................................CCCCTGGGGAGGCAGAGGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001.00-------------1.00--------------------------------------------
...........................................................................................................................................................................................................................................................CTCAGCAAGAGGACTGTTCAG..................................................................................................................................................................................................................................................................................................................................2111.001.00------------------------1.00---------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCCCGAGAAACGTGACA.................................1911.001.00------------------1.00---------------------------------------
.................................TCTGCCTTCGGGGACAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1721.001.00---------------------------------------------------0.50-0.50----
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGTGACAACAACTGGAGGTA....................2211.001.00-----------------------------------------1.00----------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGTGACAACAACTGGAGGTATT..................2411.001.00------1.00---------------------------------------------------
..................TACAGGAGAGAGCACT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1611.001.00------------------------------------------1.00---------------
.....................................................................................................................................ACAAAGAGCTGTGGTAGTAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................201.000.00----------------1.00-----------------------------------------
.................................................................................................................................................................................................................................................GAGAACTGGCCTCAGCTCT..............................................................................................................................................................................................................................................................................................................................................191.000.00---------------------------------1.00------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAAACGTGACAACAACTGGAGGTA....................2611.001.001.00---------------------------------------------------------
....................................................................................................................................................................................................................................................................AGGACTGTTCAGCACCTCTGGGAGCACC..................................................................................................................................................................................................................................................................................................................2811.001.00-----------1.00----------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................................CCTGAGTGTCGGGTGGCT.......................................................................................................................................................................181.000.00-----------------1.00----------------------------------------
.........................................................................................................................................AGAGCTGTGGTAGTTCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................171.000.00------------1.00---------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCTCGGCCCCAGGGGTCTCGG.........................................................................................................................................2211.001.00-----------------------1.00----------------------------------
...........TGACGCATACAGGAGAGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001.00----------------------------------------1.00-----------------
...........................................................................................................................................................................TGTTTTGGTCCCTGTCGCA....................................................................................................................................................................................................................................................................................................................................................................................................................191.000.00------------------------------------1.00---------------------
........................AGAGAGCACTCTGCCTTCGGGGACAGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001.00----1.00-----------------------------------------------------
............................................................................................................................................................................................................................TCCCAGCTTGGACTGTTAGAGGAGA.............................................................................................................................................................................................................................................................................................................................................................2511.001.00---------1.00------------------------------------------------
............................................................................................................................................................................................................................................................................................................CTCACTCTTTCTCATTAGC...................................................................................................................................................................................................................................................................................191.000.00------------------------------------------------1.00---------
........................................................................................................................................AAGAGCTGTGGTAGTTTGGGTGAGCATA..............................................................................................................................................................................................................................................................................................................................................................................................................................................281.000.001.00---------------------------------------------------------
..............................................................................................................................................................................................AAGGAAGGAGGGAGCCTGA.................................................................................................................................................................................................................................................................................................................................................................................................191.000.00-----------------------------------1.00----------------------
................................CTCTGCCTTCGGGGACAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001.00--------------------------------------------------1.00-------
............GACGCATACAGGAGAGAGCACTCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001.00-1.00--------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGTGACAACAACTGGAGGTAAGAT................2611.001.00----------------------1.00-----------------------------------
............................AGCACTCTGCCTTCGGGGACAGGCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................251.000.00-------------------1.00--------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACGTGACAACAACTGGAGGTA....................2311.001.00-1.00--------------------------------------------------------
................CATACAGGAGAGAGCACTCTGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001.00----------------------------------1.00-----------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGTGACAACAACTGGAGGTATC..................2411.001.00------1.00---------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................GTTGCACGTCAGAGGGCC........................................................................................................................................................................................1811.001.00--------------------1.00-------------------------------------
.............ACGCATACAGGAGAGAGCACTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001.00--------------------------------1.00-------------------------
...................................................................................................................................................................................................................................................................................................................................CTTACCGGTCGCGCCCTCTCG..........................................................................................................................................................................................................................................................211.000.00--1.00-------------------------------------------------------
....................CAGGAGAGAGCACTCTGCCTTCGGGGACAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.001.00-1.00--------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGTGACAACAACTGGAGGTACGATCCT.............2911.001.00--------------------------1.00-------------------------------
.....................................................................................................................................................................................................................................................................................CTGGGAGCACCTGGGGGT...........................................................................................................................................................................................................................................................................................................181.000.00------------1.00---------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCCCCGGCTTCCTCAT...................................................181.000.00-----------------------------1.00----------------------------
.............................................................................................................................................................................................................................................................CAGCAAGAGGACTGTTCAGC.................................................................................................................................................................................................................................................................................................................................2011.001.00--------------------------------------------1.00-------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................GTGTCGGGTGTGCTGTGTTGT...............................................................................................................................................................2111.001.00---------------------------1.00------------------------------
.......................................................................AGGCAGAGGCTGGGGGTTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................191.000.00---1.00------------------------------------------------------
......................................................................GAGGCAGAGGCTGGGGGGTCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................211.000.00-------1.00--------------------------------------------------
.........................GAGAGCACTCTGCCTTCGGGGATA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................241.000.001.00---------------------------------------------------------
.................................................................................................................................................................................................................CCTCCCAGGGTTCCCAGCTTG............................................................................................................................................................................................................................................................................................................................................................................2111.001.001.00---------------------------------------------------------
......................................................................................................................................................................................................................................GACTGTTAGAGGAGAACTGGCCT.....................................................................................................................................................................................................................................................................................................................................................2311.001.00-----------------------1.00----------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGGACGGGGCCTCCGGCA........................................................................................1911.001.00---------------------------------------1.00------------------
..................TACAGGAGAGAGCACTCTGCCTTCGGGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001.00---------1.00------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................AGTGTCGGGTGTGCTGTGTTGT...............................................................................................................................................................2211.001.00-----------1.00----------------------------------------------
..........................AGAGCACTCTGCCTTCGGGGACAGGCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................271.000.00----------------------1.00-----------------------------------
....................CAGGAGAGAGCACTCTGCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001.001.00---------------------------------------------------------
..................................................GTTGGTGGAGCACCCCTCG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................191.000.00--1.00-------------------------------------------------------
.......................GAGAGAGCACTCTGCCTTCGGGGACAGGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................291.000.00----1.00-----------------------------------------------------
............................................................................................................................................GCTGTGGTAGTTTGGGTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001.00-------------------------------------------------1.00--------
...........................GAGCACTCTGCCTTCGGGGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001.00----1.00-----------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAAACGTGACAACAACTGG.........................2111.001.00-1.00--------------------------------------------------------
.........................................................................................................................................................................................................................GGTTCCCAGCTTGGACTGTTAGAGGAGAAC...........................................................................................................................................................................................................................................................................................................................................................3011.001.00-------------1.00--------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCCCGAGAAACGTGACAACT..............................221.000.00-----------------1.00----------------------------------------
.....................AGGAGAGAGCACTCTGTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................181.000.00------------------1.00---------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGAAACGTGACAACAACTGGAG.......................2411.001.00---1.00------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................CCACACTGGAGACGCATTCGC........................................................................................................................................................................................................................2111.001.00---1.00------------------------------------------------------
......................................................................GAGGCAGAGGCTGGGGGGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................201.000.00-------1.00--------------------------------------------------
.....................AGGAGAGAGCACTCTGCCTTCGGGGACA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001.00-------------------------------1.00--------------------------
.......................................................................................................................................................................................................................................................................................................................................................................ACACTGGAGACGCATTCG.........................................................................................................................................................................................................................1811.001.001.00---------------------------------------------------------
.................ATACAGGAGAGAGCACTCTGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001.00---1.00------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................CCGGTCGCGCCCTGCTCT.........................................................................................................................................................................................................................................................181.000.00--------------------------------------1.00-------------------
......GAGTATGACGCATACTGCG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................191.000.00--1.00-------------------------------------------------------
...............................................................................................................................................................................TTGGTCCCTGTCTGAAAGGAAGGAGGGAGCA....................................................................................................................................................................................................................................................................................................................................................................................................3111.001.00-------------------------1.00--------------------------------
........................AGAGAGCACTCTGCCTTCGGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001.00-------------------------------------------1.00--------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGAAACGTGACAACAACTGG.........................2211.001.00--------------------1.00-------------------------------------
.......................................................................................................................................................................................TGTCTGAAAGGAAGGAGGG........................................................................................................................................................................................................................................................................................................................................................................................................1920.500.50----------------------------------------------------0.50-----
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACAACAACTGGAGG......................1630.330.33------------------------------------------------------0.33---
............................................................................................................................................................................................GAAAGGAAGGAGGGAGC.....................................................................................................................................................................................................................................................................................................................................................................................................1750.200.20-------------------------------------------------------0.20--
.............................................................................................................................................................................................................................................................CAGCAAGAGGACTGT......................................................................................................................................................................................................................................................................................................................................1580.120.12------------------------0.12---------------------------------
.................................................................................................................................................................................................................................................................AAGAGGACTGTTCAG..................................................................................................................................................................................................................................................................................................................................1590.110.11---------------------------------------------------------0.11

Antisense strand
GATGCAGAGTATGACGCATACAGGAGAGAGCACTCTGCCTTCGGGGACAGGTTGGTGGAGCACCCCTGGGGAGGCAGAGGCTGGGGGCAGCCAGGGCGCGCTAGTGCTTCTCTGCCCTCATGTCTGGGTTTTAACAAAGAGCTGTGGTAGTTTGGGTGAGCATCTGCCTGATGTTTTGGTCCCTGTCTGAAAGGAAGGAGGGAGCAGACCCTCCCAGGGTTCCCAGCTTGGACTGTTAGAGGAGAACTGGCCTCAGCAAGAGGACTGTTCAGCACCTCTGGGAGCACCTGGGAGATTGGGCTCACTCTTTCTCATCGTCCCTTCTTACCGGTCGCGCCCTGCAGCCCAGAGAAGTGACCACACTGGAGACGCATTCGCAGTACTTCTCTAACGTTGCACGTCAGAGGGCCCTGAGTGTCGGGTGTGCTGTGTTGTGCCTCGGCCCCAGGGGTCTCGGTCTCAGCTCCTGGGCAGCTGCGTGGCACATGGGGACGGGGCCTCCGGCACTCCCATTCCTCTGCCTCTGTCCCCCGGCTTCCTCTAGGCCCGAGAAACGTGACAACAACTGGAGGTACGATCCTCGCTTCACGGGGA
......................................................................................................................................................................................((((..(((.((((((((.((((.....((((((((((((((((...((.((.....))..((((...((((.....))))...))))....)).)))))))).)))))))).....)))).))))))))...((((((........((((((...(((.....)))....)))))).....)).))))..)))))))......................................................................................................................................................................................................................
...................................................................................................................................................................................180...........................................................................................................................................................................................................386..............................................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR189784GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR189787DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR553576(SRX182782)
source: Testis. (testes)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR189783GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR040039(GSM532924)
G531T. (cervix)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM359197(GSM359197)
hepg2_depl_cip_tap. (cell line)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR189785SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR040025(GSM532910)
G613T. (cervix)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		GSM359196(GSM359196)
m3m7G_ip. (cell line)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR038852(GSM458535)
QF1160MB. (cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
.................................................................................................................................................................................................................AAGCTGGGAACCCTGGGAGG............................................................................................................................................................................................................................................................................................................................................................................. 2012.002.00-----2.00----------------------------------------------------
................................................................................................................................................................................................................CCCTCCCAGGGTTCCCAAGAC............................................................................................................................................................................................................................................................................................................................................................................. 211.000.00----------1.00-----------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................TGCAGCCCAGAGAAGTGTT............................................................................................................................................................................................................................................ 191.000.00-------------------------------------1.00--------------------
................................................................................................................................................................................................GGAAGGAGGGAGCAGACCGT.............................................................................................................................................................................................................................................................................................................................................................................................. 201.000.00--1.00-------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................GCGCCCTGCAGCCCAGATATG................................................................................................................................................................................................................................................ 211.000.00--1.00-------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCCCGGCTTCCTCTGAGC................................................ 191.000.00----------------1.00-----------------------------------------
.............................................................................................................................................................................................................................................................................................................................................GCGCCCTGCAGCCCATAT................................................................................................................................................................................................................................................... 181.000.00---------------------------------------------1.00------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCCCCGGCTTCCTCTATAG................................................ 201.000.00--1.00-------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................GCGCCCTGCAGCCCATA.................................................................................................................................................................................................................................................... 171.000.00---1.00------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................CGGGTGTGCTGTGTTCCT.............................................................................................................................................................. 181.000.00--1.00-------------------------------------------------------
..................................................................TGGGGAGGCAGAGGCTAGCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 201.000.00----------1.00-----------------------------------------------
................................................................AGCCTCTGCCTCCCCAGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 1870.140.14----------0.14-----------------------------------------------
.............................................................................................................AGACATGAGGGCAGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 1680.120.12--------------------------------------------------------0.12-