ID: uc004cco.2_intron_16_0_chr9_135987540_r.5p
GENE: (1)
chr9:135996159-135996408-


(3)
AGO2.ip
(5)
B-CELL
(3)
BRAIN
(12)
BREAST
(21)
CELL-LINE
(14)
CERVIX
(3)
HEART
(2)
LIVER
(2)
OTHER
(1)
RRP40.ip
(38)
SKIN
(1)
TESTES
(1)
XRN.ip

Sense strand
TGGTGCTGCACAGCTTCACGCAGCTAGACCCCGACCTGCCGCGCCCGGAGGTGGGTGAGCTGGGGCGGTCGGGCGGGGGGTGCGTCGGAGCCTCCCCACCCGCGGCAGAGCTGGGCAGGTCGGGGCGAGCCCCGGACGGGGCCGGGCGATCCCAGCGGGCCGCCTCCCTCCTCTCTCCTCCATAGGTGGGGGTCGGGGCCTTCTGCAGAAATCAGCCAGCAGGGTGGGCAGTGGGGGCTGCCGCCGCGCC
.........................................................((((...((.((.(((.((((((.((......)))))))).))))).))..)))).(((...((((((....)))))).....)))...........................................................................................................
..................................................51..........................................................................................143.........................................................................................................
SizePerfect hitTotal NormPerfect NormSRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR040037(GSM532922)
G243T. (cervix)
SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
GSM956925PazD5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
TAX577738(Rovira)
total RNA. (breast)
GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040028(GSM532913)
G026N. (cervix)
SRR040008(GSM532893)
G727N. (cervix)
SRR189784TAX577588(Rovira)
total RNA. (breast)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
TAX577740(Rovira)
total RNA. (breast)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR040007(GSM532892)
G601T. (cervix)
TAX577741(Rovira)
total RNA. (breast)
GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577589(Rovira)
total RNA. (breast)
TAX577745(Rovira)
total RNA. (breast)
SRR040009(GSM532894)
G727T. (cervix)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040014(GSM532899)
G623N. (cervix)
TAX577579(Rovira)
total RNA. (breast)
SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040041(GSM532926)
G612T. (cervix)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)
SRR040013(GSM532898)
G648T. (cervix)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
GSM532875(GSM532875)
G547N. (cervix)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR189782SRR189785SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR040039(GSM532924)
G531T. (cervix)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577742(Rovira)
total RNA. (breast)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
TAX577744(Rovira)
total RNA. (breast)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR444054(SRX128902)
Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532886(GSM532886)
G850T. (cervix)
SRR040035(GSM532920)
G001T. (cervix)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577743(Rovira)
total RNA. (breast)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR040015(GSM532900)
G623T. (cervix)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR444062(SRX128910)
Sample 27_3cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)
SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
SRR444064(SRX128912)
Sample 21cDNABarcode: AF-PP-334: ACG CTC TTC . (cell line)
SRR444063(SRX128911)
Sample 20cDNABarcode: AF-PP-333: ACG CTC TTC . (cell line)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
TAX577746(Rovira)
total RNA. (breast)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040036(GSM532921)
G243N. (cervix)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR553574(SRX182780)
source: Heart. (Heart)
...........................................................CTGGGGCGGTCGGGCTGGG............................................................................................................................................................................19143.009.0035.003.00-2.00---1.00------------1.00---------------------1.00-------------------------------------------------------------
..........................................................GCTGGGGCGGTCGGGCTGGG............................................................................................................................................................................20124.006.0018.002.00----------------1.00-----------1.00---------------------------1.00------1.00--------------------------------------
..........................................................GCTGGGGCGGTCGGGCTG..............................................................................................................................................................................18124.006.001.001.008.00--3.002.00---1.001.00-1.00-1.001.00------1.001.001.00-1.00----------------------------------------------------------------------------
...........................................................CTGGGGCGGTCGGGCTGG.............................................................................................................................................................................18111.009.003.002.00-------------1.00--1.00-----1.00--1.00----------------------1.00-1.00---------------------------------------------------
..........................................................................GGGGGGTGCGTCGGAGGG..............................................................................................................................................................1810.000.00-3.003.00-----3.00--1.00--------------------------------------------------------------------------------------------
...........................................................CTGGGGCGGTCGGGC................................................................................................................................................................................1519.009.004.00-----1.001.00-------------1.00---------1.00----1.00-------------------------------------------------------------------
..........................................................GCTGGGGCGGTCGGGCTGG.............................................................................................................................................................................1918.006.002.00----3.00-------1.00-1.00-------------------1.00--------------------------------------------------------------------
...........................................................CTGGGGCGGTCGGGCTG..............................................................................................................................................................................1717.009.002.00-----1.00-------------1.001.00---------------1.00------------------------1.00-----------------------------------------
..........................................................GCTGGGGCGGTCGGGC................................................................................................................................................................................1616.006.00---3.00----------------------------------------------------------------1.00----------1.00-1.00----------------------
...........................................................................GGGGGTGCGTCGGAGGG..............................................................................................................................................................174.000.00--2.00------2.00----------------------------------------------------------------------------------------------
.........................................................................CGGGGGGTGCGTCGGAGGG..............................................................................................................................................................1914.001.00--1.00-----1.00--1.00--------------1.00-----------------------------------------------------------------------------
..........................................................GCTGGGGCGGTCGGG.................................................................................................................................................................................1533.333.330.67-----1.33---------------------------------------0.67--------------------------------------------0.330.33-----------
..........................................................................GGGGGGTGCGTCGGAGG...............................................................................................................................................................173.000.00-1.001.00------1.00----------------------------------------------------------------------------------------------
.................................................................................................................................CCCCGGACGGGGCCGGGGG......................................................................................................193.000.00---2.001.00---------------------------------------------------------------------------------------------------
..........................................................GCTGGGGCGGTCGGGCGGGGGCGCG.......................................................................................................................................................................2512.001.00--------------------------------------1.00----------------------1.00------------------------------------------
.........................................................................CGGGGGGTGCGTCGGAGG...............................................................................................................................................................1812.001.00-----------1.00--------------1.00-----------------------------------------------------------------------------
.............................................................GGGGCGGTCGGGCGGCGGC..........................................................................................................................................................................1951.800.40-0.40----------0.20---0.20-------------0.40----0.20-----------------------------------------------------------0.20-0.20------
............................................................TGGGGCGGTCGGGCGGGGACGT........................................................................................................................................................................2211.001.00----------1.00---------------------------------------------------------------------------------------------
............................................................TGGGGCGGTCGGGCGGC.............................................................................................................................................................................171.000.00-----------------------------------------------1.00--------------------------------------------------------
.......................CTAGACCCCGACCTGCCGCGCCCGGAT........................................................................................................................................................................................................271.000.00-------1.00------------------------------------------------------------------------------------------------
.............................................................GGGGCGGTCGGGCGGGCGG..........................................................................................................................................................................191.000.00--------------------------------------------1.00-----------------------------------------------------------
...............................................................................................................................AGCCCCGGACGGGGCACCA........................................................................................................191.000.00-------------------------1.00------------------------------------------------------------------------------
............................................................................................................................................................................................................................AGGGTGGGCAGTGGGGGCTGC.........2111.001.00---------------------------------------------------------------1.00----------------------------------------
.........................................................................CGGGGGGTGCGTCGGAG................................................................................................................................................................1711.001.00------------------------------------------------------------1.00-------------------------------------------
.............................................................GGGGCGGTCGGGCGGGGGGTG........................................................................................................................................................................2111.001.00------------------------------------------------------------------------------------1.00-------------------
...........................................................CTGGGGCGGTCGGGCGG..............................................................................................................................................................................1711.001.00----------1.00---------------------------------------------------------------------------------------------
.......................................................................GGCGGGGGGTGCGTCGGGTC...............................................................................................................................................................201.000.00---------------------------------------------1.00----------------------------------------------------------
...........................................................................................................GAGCTGGGCAGGTCGGGG.............................................................................................................................1811.001.00---1.00----------------------------------------------------------------------------------------------------
..........................................................GCTGGGGCGGTCGGGCT...............................................................................................................................................................................1711.006.00-----------------------------------------------------------------------1.00--------------------------------
...............................................................GGCGGTCGGGCGGGGGGGGG.......................................................................................................................................................................201.000.00----------------------1.00---------------------------------------------------------------------------------
..........................................................GCTGGGGCGGTCGGGCCG..............................................................................................................................................................................1811.006.00-------------1.00------------------------------------------------------------------------------------------
.........................................................AGCTGGGGCGGTCGGGCT...............................................................................................................................................................................181.000.00-----------------------------------------------------------------------------1.00--------------------------
..........................................................................GGGGGGTGCGTCGGAGGGC.............................................................................................................................................................191.000.00-1.00------------------------------------------------------------------------------------------------------
.....................................................................CGGGCGGGGGGTGCGCC....................................................................................................................................................................171.000.00----------------------------------------------------------------------------------1.00---------------------
.......................................................................GGCGGGGGGTGCGTCGGAGGG..............................................................................................................................................................211.000.00--1.00-----------------------------------------------------------------------------------------------------
.....................................................................CGGGCGGGGGGTGCGCCGC..................................................................................................................................................................191.000.00---1.00----------------------------------------------------------------------------------------------------
..........................................................GCTGGGGCGGTCGGGCGGGGGCA.........................................................................................................................................................................2311.001.00-----------------------------1.00--------------------------------------------------------------------------
....................................................................TCGGGCGGGGGGTGCTCC....................................................................................................................................................................181.000.00-------------------------------------------------------------------------1.00------------------------------
...........................................................CTGGGGCGGTCGGGCGGGGGGCGCG......................................................................................................................................................................251.000.00---------------------------------------------------------1.00----------------------------------------------
........................................................................GCGGGGGGTGCGTCGGA.................................................................................................................................................................1711.001.00-1.00------------------------------------------------------------------------------------------------------
............................CCCCGACCTGCCGCGCCC............................................................................................................................................................................................................1811.001.00---------------------------------------------------------------------------1.00----------------------------
...........................................................CTGGGGCGGTCGGGCTGGC............................................................................................................................................................................1911.009.00-------------------------------------------1.00------------------------------------------------------------
...........................................................CTGGGGCGGTCGGGCGGCGC...........................................................................................................................................................................2011.001.00----------------1.00---------------------------------------------------------------------------------------
..........................................................................GGGGGGTGCGTCGGAGGGCG............................................................................................................................................................201.000.00-1.00------------------------------------------------------------------------------------------------------
...........................................................CTGGGGCGGTCGGGCT...............................................................................................................................................................................1611.009.00--------------------------------1.00-----------------------------------------------------------------------
............................................................TGGGGCGGTCGGGCGGGGGC..........................................................................................................................................................................201.000.00-----------------1.00--------------------------------------------------------------------------------------
.......................................................................................................................................................................................................CTTCTGCAGAAATCAGCCAGCAGGGTGGGC.....................3011.001.00-------------------1.00------------------------------------------------------------------------------------
.................ACGCAGCTAGACCCCGAC.......................................................................................................................................................................................................................1811.001.00------------------------------------------------1.00-------------------------------------------------------
...........................................CCCGGAGGTGGGTGAGCTGGGGCGGTC....................................................................................................................................................................................2711.001.00----------1.00---------------------------------------------------------------------------------------------
..........................................................................................................................................................................CTCTCTCCTCCATAGGTGG.............................................................1911.001.00---------------------------------1.00----------------------------------------------------------------------
...............................................................GGCGGTCGGGCGGGGGGG.........................................................................................................................................................................181.000.00-1.00------------------------------------------------------------------------------------------------------
..............................................................GGGCGGTCGGGCGGGA............................................................................................................................................................................161.000.00---------------------------------------------------1.00----------------------------------------------------
..............................................................GGGCGGTCGGGCGGGCGG..........................................................................................................................................................................181.000.00----------------------------------------1.00---------------------------------------------------------------
............................................................TGGGGCGGTCGGGCGGGG............................................................................................................................................................................1811.001.00-----------------------------1.00--------------------------------------------------------------------------
........................................................................................................................................................................................................TTCTGCAGAAATCAGCCAGCAGGGTGGGC.....................2911.001.00-------1.00------------------------------------------------------------------------------------------------
..............................................................GGGCGGTCGGGCGGGC............................................................................................................................................................................161.000.00----------------------------------------------------------------------1.00---------------------------------
............................................................................................................................................................................................GGGGTCGGGGCCTTCTGATCG.........................................211.000.00------------------------------------------------------1.00-------------------------------------------------
........................................................................................................................................................................................................TTCTGCAGAAATCAGCCAG...............................1911.001.00-------------------------------------------------------1.00------------------------------------------------
.........................................................AGCTGGGGCGGTCGGGCTG..............................................................................................................................................................................191.000.00---------1.00----------------------------------------------------------------------------------------------
...........................................................CTGGGGCGGTCGGGCGGGGGC..........................................................................................................................................................................211.000.001.00-------------------------------------------------------------------------------------------------------
.............................................................GGGGCGGTCGGGCGGCGG...........................................................................................................................................................................1851.000.40-0.40----------0.20---------------------0.20-----------------------------------------------------------------0.20---
........................TAGACCCCGACCTGCCGC................................................................................................................................................................................................................1811.001.00-------1.00------------------------------------------------------------------------------------------------
..........................................................GCTGGGGCGGTCGGGCGGGGG...........................................................................................................................................................................2111.001.001.00-------------------------------------------------------------------------------------------------------
............................................................TGGGGCGGTCGGGCGGCGG...........................................................................................................................................................................191.000.00----------------------------1.00---------------------------------------------------------------------------
................................................................GCGGTCGGGCGGGGGG..........................................................................................................................................................................1630.670.67--------------------------------0.33-------------0.33---------------------------------------------------------
................................................................GCGGTCGGGCGGGGG...........................................................................................................................................................................1560.500.50--0.33---------------------------------------------------------------------------------------------------0.17-
.............................................................GGGGCGGTCGGGCGG..............................................................................................................................................................................1550.400.40----------------------------------------------------------------------------------------0.20----------0.20----
................................................................GCGGTCGGGCGGGGGGGGGT......................................................................................................................................................................2030.330.67-------------------------------------------------------------------------------------0.33------------------
.................................................................CGGTCGGGCGGGGGGGC........................................................................................................................................................................1730.330.33----0.33---------------------------------------------------------------------------------------------------
.............................................................GGGGCGGTCGGGCGGGG............................................................................................................................................................................1730.330.33-0.33------------------------------------------------------------------------------------------------------
................................................................GCGGTCGGGCGGGGGGGTG.......................................................................................................................................................................1930.330.67---------------------------------------------------------------------------------------------0.33----------
..........................................................GCTGGGGCGGTCGGGA................................................................................................................................................................................1630.333.33--------------------------------------------------------------------------------------0.33-----------------
..........................................................GCTGGGGCGGTCGGGGTGG.............................................................................................................................................................................1930.333.33-------------------------------------------------------------------------------------0.33------------------
..........................................................GCTGGGGCGGTCGGGATG..............................................................................................................................................................................1830.333.33-------------0.33------------------------------------------------------------------------------------------
.................................................................CGGTCGGGCGGGGGGGGGG......................................................................................................................................................................1930.330.33----0.33---------------------------------------------------------------------------------------------------
..........................................................GCTGGGGCGGTCGGGTTGG.............................................................................................................................................................................1930.333.33-----------------------------------------------------------------------------------------0.33--------------
.................................................................CGGTCGGGCGGGGGG..........................................................................................................................................................................1530.330.33-------------------------------0.33------------------------------------------------------------------------
................................................................GCGGTCGGGCGGGGGGGT........................................................................................................................................................................1830.330.67------------------------------------------------------------------------------------------0.33-------------
..............................................................GGGCGGTCGGGCGGGGGTG.........................................................................................................................................................................1940.250.25----------------------------------------------------------------------------------------------0.25---------
..............................................................GGGCGGTCGGGCGGGGG...........................................................................................................................................................................1740.250.250.25-------------------------------------------------------------------------------------------------------
.............................................................GGGGCGGTCGGGCGGCTG...........................................................................................................................................................................1850.200.40-0.20------------------------------------------------------------------------------------------------------
.............................................................GGGGCGGTCGGGCGGCC............................................................................................................................................................................1750.200.40------------------------------------------------------------------------------------------------0.20-------
.............................................................GGGGCGGTCGGGCGGAGGC..........................................................................................................................................................................1950.200.40-0.20------------------------------------------------------------------------------------------------------
.............................................................GGGGCGGTCGGGCGGTGGT..........................................................................................................................................................................1950.200.40--------------------------------------------------------------------------------------------------0.20-----
.............................................................GGGGCGGTCGGGCGGC.............................................................................................................................................................................1650.200.40--------------------------------------------------------------------------------------0.20-----------------
.............................................................GGGGCGGTCGGGCGGCCGC..........................................................................................................................................................................1950.200.40----------------0.20---------------------------------------------------------------------------------------
................................................................GCGGTCGGGCGGGGGAGG........................................................................................................................................................................1860.170.50-----------------------------------------------------------------------------------------------------0.17--
...............................................................GGCGGTCGGGCGGGG............................................................................................................................................................................1590.110.11-------------------------------------------------------------------------------------------------------0.11

Antisense strand
TGGTGCTGCACAGCTTCACGCAGCTAGACCCCGACCTGCCGCGCCCGGAGGTGGGTGAGCTGGGGCGGTCGGGCGGGGGGTGCGTCGGAGCCTCCCCACCCGCGGCAGAGCTGGGCAGGTCGGGGCGAGCCCCGGACGGGGCCGGGCGATCCCAGCGGGCCGCCTCCCTCCTCTCTCCTCCATAGGTGGGGGTCGGGGCCTTCTGCAGAAATCAGCCAGCAGGGTGGGCAGTGGGGGCTGCCGCCGCGCC
.........................................................((((...((.((.(((.((((((.((......)))))))).))))).))..)))).(((...((((((....)))))).....)))...........................................................................................................
..................................................51..........................................................................................143.........................................................................................................
SizePerfect hitTotal NormPerfect NormSRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR040037(GSM532922)
G243T. (cervix)
SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
GSM956925PazD5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
TAX577738(Rovira)
total RNA. (breast)
GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040028(GSM532913)
G026N. (cervix)
SRR040008(GSM532893)
G727N. (cervix)
SRR189784TAX577588(Rovira)
total RNA. (breast)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
TAX577740(Rovira)
total RNA. (breast)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR040007(GSM532892)
G601T. (cervix)
TAX577741(Rovira)
total RNA. (breast)
GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577589(Rovira)
total RNA. (breast)
TAX577745(Rovira)
total RNA. (breast)
SRR040009(GSM532894)
G727T. (cervix)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040014(GSM532899)
G623N. (cervix)
TAX577579(Rovira)
total RNA. (breast)
SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040041(GSM532926)
G612T. (cervix)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)
SRR040013(GSM532898)
G648T. (cervix)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
GSM532875(GSM532875)
G547N. (cervix)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR189782SRR189785SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR040039(GSM532924)
G531T. (cervix)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577742(Rovira)
total RNA. (breast)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
TAX577744(Rovira)
total RNA. (breast)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR444054(SRX128902)
Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532886(GSM532886)
G850T. (cervix)
SRR040035(GSM532920)
G001T. (cervix)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577743(Rovira)
total RNA. (breast)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR040015(GSM532900)
G623T. (cervix)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR444062(SRX128910)
Sample 27_3cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)
SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
SRR444064(SRX128912)
Sample 21cDNABarcode: AF-PP-334: ACG CTC TTC . (cell line)
SRR444063(SRX128911)
Sample 20cDNABarcode: AF-PP-333: ACG CTC TTC . (cell line)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
TAX577746(Rovira)
total RNA. (breast)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040036(GSM532921)
G243N. (cervix)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR553574(SRX182780)
source: Heart. (Heart)
.................................................................................................................................CCGGCCCCGTCCGGGG......................................................................................................... 1619.009.00---3.002.00------------------------------------------------------1.00-------1.00----1.00-------1.00-----------------------
....................................................................................................................................CGGACGGGGCCGGGCGCCC................................................................................................... 196.000.00------------2.00-2.00----------------------------------1.00------1.00-----------------------------------------------
............................CCCCGACCTGCCGCGG.............................................................................................................................................................................................................. 162.000.00------------------------------------------------------------------------------1.00----1.00--------------------
....................................................................................................................................CGGACGGGGCCGGGCGCCCC.................................................................................................. 202.000.00------------1.00---------------------------------------------------1.00---------------------------------------
.................................................................................................................................CCCGGCCCCGTCCGGGG........................................................................................................ 1712.002.00---1.001.00---------------------------------------------------------------------------------------------------
...........................CGCGGCAGGTCGGGGT............................................................................................................................................................................................................... 1611.001.00-----------------1.00--------------------------------------------------------------------------------------
....................................................................................................................................CGGACGGGGCCGGGCCCA.................................................................................................... 181.000.00----------------------------------------------------------------------------1.00---------------------------
...................................................................................................................................CCGGACGGGGCCGGGCC...................................................................................................... 171.000.00-----------------------1.00--------------------------------------------------------------------------------
.....................................................................................................................................GGACGGGGCCGGGCGTCG................................................................................................... 181.000.00-------------------1.00------------------------------------------------------------------------------------
................................................................................................................................GCCCCGGACGGGGCCGGCG....................................................................................................... 191.000.00----------------------------1.00---------------------------------------------------------------------------
...............................................................................................................................................................GAGAGAGGAGGGAGGCGG......................................................................... 1811.001.00----------------------------------1.00---------------------------------------------------------------------
...........................................................................GGGGGTGCGTCGGAGGCCA............................................................................................................................................................ 191.000.00-----------------------------------------1.00--------------------------------------------------------------
....................................................................................................................................CGGACGGGGCCGGGCGTCC................................................................................................... 191.000.00---------------------------------------------------------------------1.00----------------------------------
...............................................................................................................................................................CCGCCTCCCTCCTCTACTG........................................................................ 191.000.00----------------------1.00---------------------------------------------------------------------------------
....................................................................................................................................CGGACGGGGCCGGGCGC..................................................................................................... 171.000.00------------------------------------------------------------------1.00-------------------------------------
..............................................................GGGCGGTCGGGCGGGGGT.......................................................................................................................................................................... 1841.000.00-1.00------------------------------------------------------------------------------------------------------
.................................................................................................................................CCCCGGACGGGGCCGGGGCG..................................................................................................... 201.000.00----1.00---------------------------------------------------------------------------------------------------
........................................................................GCGGGGGGTGCGTCGGCC................................................................................................................................................................ 181.000.00----1.00---------------------------------------------------------------------------------------------------
....................................................................................................................................CGGACGGGGCCGGGCGCC.................................................................................................... 181.000.00--------------1.00-----------------------------------------------------------------------------------------
.......................................................................GGCGGGGGGTGCGTCGA.................................................................................................................................................................. 171.000.00---------------------------------------1.00----------------------------------------------------------------
.................................................................................................................................CCCCGGACGGGGCCGG......................................................................................................... 161.000.00--------------------------------------------------------------------------1.00-----------------------------
.................................................................................................................................CCCCGGACGGGGCCGGGTCG..................................................................................................... 201.000.00----1.00---------------------------------------------------------------------------------------------------
..............................................................................................................................................................GCCGCCTCCCTCCTCTCGAAG....................................................................... 211.000.00-----------------------------------------------------1.00--------------------------------------------------
..................................................................................................................................CCGGCCCCGTCCGGG......................................................................................................... 1520.500.50---------------------------------------------------------------------------------------0.50----------------
....................................................................CGCACCCCCCGCCCGA...................................................................................................................................................................... 1630.330.33---------------------------------0.33----------------------------------------------------------------------
.........................................................................CCGACGCACCCCCCG.................................................................................................................................................................. 1540.250.25----------------------------------------------------------------------------------------0.25---------------
.........................................................................CGGGGGGTGCGTCGGGA................................................................................................................................................................ 170.250.00---0.25----------------------------------------------------------------------------------------------------
.....................................................................CGCACCCCCCGCCCG...................................................................................................................................................................... 1570.140.14---0.14----------------------------------------------------------------------------------------------------