ID: uc004cbl.2_intron_8_0_chr9_135275646_r.5p
GENE: (2)
chr9:135276642-135276891-


(1)
AGO2.ip 		(1)
B-CELL 		(1)
BRAIN 		(1)
BREAST 		(9)
CELL-LINE 		(1)
CERVIX 		(1)
HEART 		(1)
HELA 		(5)
SKIN

Sense strand
AAGAAAACCCAGGCCTGTTTGGCAAGCAAGCACGTGCAAGAGGCGCCAAGGTAACGAGGGAGTGGTATTCCAGCTGCTGGTATATTTCTTTCGTATGGATTCTGCCGATACCTCTTTATTTAGCACAGACTTTTTTTTATTTTTAATTTTATTTTTATTTATTTATTTATTTATTTTTGAGGTGGAGATTTGCTCTTATTGTCCAGGCTGGAGTGCAATGGTGCAATCTCGGCTTACCGCACCCTCCACT
.................................................................................................................................................((((((....((..((......))..))....)))))).(((.....))).......................................................
................................................................................................................................129....................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040009(GSM532894)
G727T. (cervix)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
.................................................................................................................................................ATTTTATTTTTATTTATTTATTTATTTATTG..........................................................................3176.000.003.0045.003.0024.00--1.00-------------
.......................................................................................................................................................TTTTTATTTATTTATTTATTTATTTTCTAG.....................................................................3016.000.003.004.00-9.00----------------
........................................................................................................................................................TTTTATTTATTTATTTATTTATTTCTAG......................................................................2811.000.005.00-6.00-----------------
......................................................................................................................................................ATTTTTATTTATTTATTTATTTATTTCTTG......................................................................3011.000.004.00-7.00-----------------
......................................................................................................................................................ATTTTTATTTATTTATTTATTTATTTTTCG......................................................................3010.000.006.00-2.00---2.00-------------
.....................................................................................................................................TTTTTATTTTTAATTTTATTTAAG.............................................................................................248.000.00-6.00-2.00----------------
.................................................................................................................................................ATTTTATTTTTATTTATTTATTTATTCTTG...........................................................................306.000.004.00-2.00-----------------
..................................................................................................................................................TTTTATTTTTATTTATTTATTTATTTATCTAG........................................................................326.000.005.00-1.00-----------------
........................................................................................................................................................TTTTATTTATTTATTTATTTATTCATG.......................................................................274.000.001.001.001.001.00----------------
.......................................................................................................................................................TTTTTATTTATTTATTTATTTATTCTTG.......................................................................284.000.001.00-1.00-2.00---------------
....................................................................................................................................................TTATTTTTATTTATTTATTTATTTATTTTTCAAG....................................................................344.000.002.00-2.00-----------------
......................................................................................................................................TTTTATTTTTAATTTTATTTAAG.............................................................................................233.000.00-3.00------------------
.......................................................................................................................................................TTTTTATTTATTTATTTATTTCTTG..........................................................................253.000.001.00-2.00-----------------
................................................................................................................................................AATTTTATTTTTATTTATTTATTTATCT..............................................................................283.000.00-----3.00--------------
....................................................................................................................................................TTATTTTTATTTATTTATTTATTTATCTAG........................................................................303.000.00--3.00-----------------
......................................................................................................................................................ATTTTTATTTATTTATTTATTTACTTG.........................................................................272.000.001.00-1.00-----------------
...................................................................................................................................................TTTATTTTTATTTATTTATTTATTTATCTG.........................................................................302.000.001.00-1.00-----------------
...................................................................................................................................................TTTATTTTTATTTATTTATTTATCTAG............................................................................272.000.00--2.00-----------------
..................................................................................................................................................TTTTATTTTTATTTATTTATTTATTTATTCAG........................................................................322.000.00--2.00-----------------
.......................................................................................................................................................TTTTTATTTATTTATTTATTTATTCATG.......................................................................282.000.002.00-------------------
......................................................................................................................................................ATTTTTATTTATTTATTTATTTATTCATG.......................................................................292.000.001.00-1.00-----------------
.....................................................................................................................................................TATTTTTATTTATTTATTTATTTATTCCG........................................................................292.000.002.00-------------------
....................................................................................................................................................TTATTTTTATTTATTTATTTATTTCCAG..........................................................................282.000.002.00-------------------
......................................................................................................................................................ATTTTTATTTATTTATTTATTTATTTTTCGAG....................................................................322.000.00------2.00-------------
........................................................................................................................................................TTTTATTTATTTATTTATTTATTTCCAG......................................................................282.000.001.00-1.00-----------------
......................................................................................................................................................ATTTTTATTTATTTATTTATTTCTTG..........................................................................262.000.00--1.001.00----------------
...................................................................................................................................................TTTATTTTTATTTATTTATTTATTTCTTG..........................................................................292.000.00-1.00-1.00----------------
.................................................................................................................................................ATTTTATTTTTATTTATTTATTTATCTTG............................................................................292.000.00--2.00-----------------
..................................................................................................................................................TTTTATTTTTATTTATTTATTTATTTCAG...........................................................................292.000.001.001.00------------------
.....................................................................................................................................................TATTTTTATTTATTTATTTATTTCTTG..........................................................................272.000.002.00-------------------
.........................................................................................................................................................................................................TCCAGGCTGGAGTGCAATGGTGGAA........................252.000.00-------2.00------------
.......................................................................................................................................................TTTTTATTTATTTATTTATTTATTTCCG.......................................................................282.000.001.001.00------------------
................................................................................................................................ACTTTTTTTTATTTTCTAG.......................................................................................................192.000.00---2.00----------------
.....................................................................................................................................................TATTTTTATTTATTTATTTATTTATTTTTCG......................................................................312.000.001.00--1.00----------------
......................................................................................................................................................ATTTTTATTTATTTATTTATTTATATG.........................................................................272.000.002.00-------------------
.................................................................................................................................................ATTTTATTTTTATTTATTTATTTCTG...............................................................................262.000.002.00-------------------
..................................................................................................................................................TTTTATTTTTATTTATTTATTTATCG..............................................................................262.000.002.00-------------------
..................................................................................................................................................TTTTATTTTTATTTATTTATTTATTTATCTG.........................................................................312.000.002.00-------------------
......................................................................................................................................................ATTTTTATTTATTTATTTATTTCTAG..........................................................................262.000.001.00-1.00-----------------
.......................................................................................................................................................TTTTTATTTATTTATTTATTTATTCAG........................................................................272.000.00--1.001.00----------------
.....................................................................................................................................................TATTTTTATTTATTTATTTATTTATTTTCAAG.....................................................................321.000.00----1.00---------------
......................................................................................................................................................ATTTTTATTTATTTATTTATTTATTTCTAG......................................................................301.000.001.00-------------------
.....................................................................................................................................................TATTTTTATTTATTTATTTATTTATTTTCTG......................................................................311.000.001.00-------------------
........................................................................................................................................................TTTTATTTATTTATTTATTTATTCCG........................................................................261.000.00--1.00-----------------
........................................................................................................................................TTATTTTTAATTTTATTTAAG.............................................................................................211.000.00-1.00------------------
.....................................................................................................................................................TATTTTTATTTATTTATTTATTTATTTCTTG......................................................................311.000.001.00-------------------
.......................................................................................................................................................TTTTTATTTATTTATTTATTTATACCG........................................................................271.000.00---1.00----------------
..................................................................................................................................................TTTTATTTTTATTTATTTATTTATTTATTCTAG.......................................................................331.000.001.00-------------------
..............................................................................................................................................................................TTTTGAGGTGGAGATAGTG.........................................................191.000.00-----------1.00--------
.....................................................................................................................................TTTTTATTTTTAATTTTATTTTCG.............................................................................................241.000.00---1.00----------------
...................................................................................................................................................TTTATTTTTATTTATTTATTTATTTCAG...........................................................................281.000.001.00-------------------
.....................................................................................................................................................TATTTTTATTTATTTATTTATTTCTCG..........................................................................271.000.00---1.00----------------
............................................................................................................................ACAGACTTTTTTTTATTTTTCCG.......................................................................................................231.000.00-----1.00--------------
............................................................................................................................................TTTTAATTTTATTTTTATTTATTTTCTG..................................................................................281.000.00---1.00----------------
.....................................................................................................................................................................................................ATTGTCCAGGCTGGAGTGCGGAG..............................231.000.00----1.00---------------
......................................................................................................................................................ATTTTTATTTATTTATTTATTTATTTTTCAAG....................................................................321.000.00--1.00-----------------
..................................................................................................................................................TTTTATTTTTATTTATTTATTTATTCCTG...........................................................................291.000.00--1.00-----------------
................................................................................................................................................AATTTTATTTTTATTTATTTATTTACTTA.............................................................................291.000.00--1.00-----------------
......................................................................................................................................................ATTTTTATTTATTTATTTATTTATTATG........................................................................281.000.00-1.00------------------
................................................................................................................................ACTTTTTTTTATTTTTATACG.....................................................................................................211.000.00--1.00-----------------
..................................................................................................................................................TTTTATTTTTATTTATTTATTTATCTG.............................................................................271.000.00---1.00----------------
.......................................................................................................................................................TTTTTATTTATTTATTTATTTATTTCTAG......................................................................291.000.00--1.00-----------------
......................................................................................................................................................................................................TTGTCCAGGCTGGAGTGCAACGTC............................241.000.00-----1.00--------------
.....................................................................................................................................................TATTTTTATTTATTTATTTATTTATGG..........................................................................271.000.00---1.00----------------
..................................................................................................................................................TTTTATTTTTATTTATTTATTTATTTATTCCG........................................................................321.000.001.00-------------------
.....................................................................................................................................................TATTTTTATTTATTTATTTATTTATTTTCTGG.....................................................................321.000.00-1.00------------------
.....................................................................................................................................................................................................ATTGTCCAGGCTGGAGTGCAATGGGGTG.........................281.000.00----1.00---------------
......................................................................................................................................................................................................TTGTCCAGGCTGGAGTGCAATGGTGCAACT......................301.000.00-----1.00--------------
......................................................................................................................................................ATTTTTATTTATTTATTTATTTATCAAG........................................................................281.000.00---1.00----------------
.......................................................................................................................................................TTTTTATTTATTTATTTATTTATAG..........................................................................251.000.00--1.00-----------------
...........................................................................................................................................................................................................CAGGCTGGAGTGCAATGGTGCAATGATC...................281.000.00--------1.00-----------
.......................................................................................................................................................................................................TGTCCAGGCTGGAGTGCAAAAA.............................221.000.00-----------------1.00--
.....................................................................................................................................................TATTTTTATTTATTTATTTATTTATTCAC........................................................................291.000.00----1.00---------------
.................................................................................................................................CTTTTTTTTATTTTTAAGTTT....................................................................................................211.000.00------1.00-------------
..................................................................................................................................................TTTTATTTTTATTTATTTATTTATTTATTTCTTG......................................................................341.000.001.00-------------------
................................................................................................................................ACTTTTTTTTATTTTTATCA......................................................................................................201.000.00------1.00-------------
........................................................................................................................................................TTTTATTTATTTATTTATTTATTCACG.......................................................................271.000.001.00-------------------
....................................................................................................................................................TTATTTTTATTTATTTATTTATTTATTTTTCG......................................................................321.000.00--1.00-----------------
.....................................................................................................................................................TATTTTTATTTATTTATTTATTTCAAG..........................................................................271.000.00--1.00-----------------
..................................................................................................................................................TTTTATTTTTATTTATTTATTCTTG...............................................................................251.000.00--1.00-----------------
.........CAGGCCTGTTTGGCAAGCAAGCAC.........................................................................................................................................................................................................................2411.001.00---------1.00----------
......................................................................................................................................................ATTTTTATTTATTTATTTATTTCAGA..........................................................................261.000.00----1.00---------------
.......................................................................................................................................................TTTTTATTTATTTATTTATTTCTCG..........................................................................251.000.00--1.00-----------------
.......................................................................................................................................................TTTTTATTTATTTATTTATTTATTTCTGG......................................................................291.000.00------1.00-------------
.................................................................................................................................................ATTTTATTTTTATTTATTTATTTATTTCTTG..........................................................................311.000.00---1.00----------------
....................................................................................................................................................TTATTTTTATTTATTTATTTATTTATCTG.........................................................................291.000.00--1.00-----------------
........................................................................................................................................................TTTTATTTATTTATTTATTTATTTTTGCAGG...................................................................311.000.00-----1.00--------------
......................................................................................................................................................ATTTTTATTTATTTATTCTTG...............................................................................211.000.00--1.00-----------------
..................................................................................................................................................TTTTATTTTTATTTATTTATTTATTTATTCTG........................................................................321.000.001.00-------------------
........................................................................................................................................................TTTTATTTATTTATTTATTTATTTCTAT......................................................................281.000.001.00-------------------
.................................................................................................................................CTTTTTTTTATTTTTAATTTTATTTG...............................................................................................261.000.00-1.00------------------
..................................................................................................................................................TTTTATTTTTATTTATTTATTTATTTATTCG.........................................................................311.000.001.00-------------------
......................................................................................................................................................ATTTTTATTTATTTATTTATTTATTCAG........................................................................281.000.001.00-------------------
.....................................................................CCAGCTGCTGGTATATTT...................................................................................................................................................................1811.001.00-------------1.00------
..................................................................................................................................................TTTTATTTTTATTTATTTATTTATTCTAG...........................................................................291.000.00--1.00-----------------
......................................................................................................................................................ATTTTTATTTATTTATTTATTTATTTTCTGG.....................................................................311.000.00------1.00-------------
......................................................................................................................................................ATTTTTATTTATTTATTTATTTATCTAG........................................................................281.000.001.00-------------------
.................................................................................................................................................ATTTTATTTTTATTTATTTATTTATTTATTC..........................................................................311.000.00-----1.00--------------
................................CGTGCAAGAGGCGCCA..........................................................................................................................................................................................................1611.001.00------------1.00-------
......................................................................................................................................................ATTTTTATTTATTTATTTAATGG.............................................................................231.000.00----1.00---------------
...................................................................................................................................................TTTATTTTTATTTATTTATTTATTCTAG...........................................................................281.000.001.00-------------------
..............CTGTTTGGCAAGCAAGCACGTGCAAGAGGCG.............................................................................................................................................................................................................3111.001.00--------------1.00-----
..............................................................................................................................AGACTTTTTTTTATTTTTTGT.......................................................................................................211.000.00---1.00----------------
....................................................................................................................................................TTATTTTTATTTATTTATTTATTTATTCTG........................................................................301.000.00--1.00-----------------
......................................................................CAGCTGCTGGTATATTTCTTT...............................................................................................................................................................2111.001.00----------1.00---------
..................................................................................................................................................TTTTATTTTTATTTATTTCGAG..................................................................................221.000.00----1.00---------------
................................................................................................................................................AATTTTATTTTTATTTATTTATTTAG................................................................................261.000.00-1.00------------------
................................................................................................................................ACTTTTTTTTATTTTTAATTTTAT..................................................................................................2421.001.001.00-------------------
......................................................................................................................................................ATTTTTATTTATTTATTTATTTCCG...........................................................................251.000.001.00-------------------
..................................................................................................................................................TTTTATTTTTATTTATTTATCTG.................................................................................231.000.00-1.00------------------
.....................................................................................................................................................TATTTTTATTTATTTATTTATCTTG............................................................................251.000.00--1.00-----------------
..............................................................................................................................AGACTTTTTTTTATTCTG..........................................................................................................181.000.00----1.00---------------
.............................................................................................................................................TTTAATTTTATTTTTATTTAAAG......................................................................................231.000.00---1.00----------------
......................................................................................................................................................ATTTTTATTTATTTATTTATTTATTACAG.......................................................................291.000.00-1.00------------------
......................................................................................................................................................ATTTTTATTTATTTATTTATTTATTCTTG.......................................................................291.000.00--1.00-----------------
......................................................................................................................................................ATTTTTATTTATTTATTTATTTATTTTTCGG.....................................................................311.000.00-----1.00--------------
..................................................................................................................................................TTTTATTTTTATTTATTTATTTATTTATTACA........................................................................321.000.00--1.00-----------------
......................................................................................................................................................ATTTTTATTTATTTATTTATTTCAAG..........................................................................261.000.001.00-------------------
......................................................................................................................................................ATTTTTATTTATTTATTTATTTATTTTCGG......................................................................301.000.00----1.00---------------
....AAACCCAGGCCTGTTTGGCAAGCA..............................................................................................................................................................................................................................2411.001.00---------------1.00----
.................................................................................................................................................ATTTTATTTTTATTTATTTATTCTTG...............................................................................261.000.001.00-------------------
.....................................................................................................................................................TATTTTTATTTATTTATTTATTTATCTAG........................................................................291.000.001.00-------------------
...............................................................................................................................................TAATTTTATTTTTATTTATTTATTTTCAG..............................................................................291.000.00-1.00------------------
......................................................................................................................................................ATTTTTATTTATTTATTTATTTATAG..........................................................................261.000.001.00-------------------
................................................................................................................................................AATTTTATTTTTATTTATTTATTTATTTTTTG..........................................................................321.000.00---1.00----------------
..................................................................................................................................................TTTTATTTTTATTTATTTATTTCTCC..............................................................................261.000.00----1.00---------------
....................................................................................................................................................TTATTTTTATTTATTTATTTATTTATTCTTG.......................................................................311.000.001.00-------------------
......................................................................................................................................................ATTTTTATTTATTTATTTATTTATTTTTGGCG....................................................................321.000.00----1.00---------------
................................................................................................................................................AATTTTATTTTTATTTATTTATTTATTCG.............................................................................291.000.00--1.00-----------------
................................................................................................................................................AATTTTATTTTTATTTATTTATTTATTTATTTTTG.......................................................................3521.001.00--0.500.50----------------
......................................................................................................................................................ATTTTTATTTATTTATTTATTTATTTTCTCG.....................................................................311.000.001.00-------------------
.......................................................................................................................................................TTTTTATTTATTTATTTATTTATATG.........................................................................261.000.00--1.00-----------------
......................................................................................................................................................ATTTTTATTTATTTATTTAATG..............................................................................221.000.001.00-------------------
.......................................................................................................................................................TTTTTATTTATTTATTTATTTATTTCAAT......................................................................291.000.00---1.00----------------
...................................................................................................................................................TTTATTTTTATTTATTTATCTCG................................................................................231.000.001.00-------------------
.......................................................................................................................................................TTTTTATTTATTTATTTATTGGGG...........................................................................241.000.00----1.00---------------
.................................................................................................................................................ATTTTATTTTTATTTATTTATTTATTTATTGAG........................................................................331.000.00------1.00-------------
.....................................................................................................................................................................................................ATTGTCCAGGCTGGAGTGCAATGGTTC..........................271.000.00----------------1.00---
.................................................................................................................................................ATTTTATTTTTATTTATTTATTTATTTATTTTCTG......................................................................351.000.001.00-------------------
......................................................................CAGCTGCTGGTATATTT...................................................................................................................................................................1720.500.50------------------0.50-
......................................................................................................................................................ATTTTTATTTATTTATTTATTTATTTTTGAGG....................................................................3230.330.33---0.33----------------
.......................................................................................................................................................TTTTTATTTATTTATTTATTTATTTTTGAGG....................................................................3150.200.20----0.20---------------
........................................................................................................................................................TTTTATTTATTTATTTATTTATTTTTGAGGTGG.................................................................3350.200.20----0.20---------------

Antisense strand
AAGAAAACCCAGGCCTGTTTGGCAAGCAAGCACGTGCAAGAGGCGCCAAGGTAACGAGGGAGTGGTATTCCAGCTGCTGGTATATTTCTTTCGTATGGATTCTGCCGATACCTCTTTATTTAGCACAGACTTTTTTTTATTTTTAATTTTATTTTTATTTATTTATTTATTTATTTTTGAGGTGGAGATTTGCTCTTATTGTCCAGGCTGGAGTGCAATGGTGCAATCTCGGCTTACCGCACCCTCCACT
.................................................................................................................................................((((((....((..((......))..))....)))))).(((.....))).......................................................
................................................................................................................................129....................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040009(GSM532894)
G727T. (cervix)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
.............................................................................................................................................................................................................GGCTGGAGTGCAATGGTGCAATGGAC................... 262.000.00-----2.00--------------
.............................................................................................................................................................................................................GGCTGGAGTGCAATGGTGCAATGGGT................... 262.000.00----2.00---------------
.............................................................................................................................................................................................................GGCTGGAGTGCAATGGTGCAGAGC..................... 241.000.00-----1.00--------------
.............................................................................................................................................................................................................GGCTGGAGTGCAATGGTGAGC........................ 211.000.00-----1.00--------------
.............................................................................................................................................................................................................GGCTGGAGTGCAATGGTGCAATCTGGTC................. 281.000.00----1.00---------------
.............................................................................................................................................................................................................GGCTGGAGTGCAATGGTGCAATGAGC................... 261.000.00-----1.00--------------
...............................................................................................................................................................................CAAATCTCCACCTCAAA.......................................................... 1750.200.20-------------------0.20