ID: uc004can.3_intron_6_0_chr9_134322594_f
GENE: (7)
chr9:134322544-134323098+


(1)
AGO2.ip 		(7)
B-CELL 		(1)
BRAIN 		(9)
BREAST 		(18)
CELL-LINE 		(3)
CERVIX 		(6)
HEART 		(3)
HELA 		(6)
LIVER 		(1)
OTHER 		(19)
SKIN 		(1)
TESTES 		(1)
XRN.ip

Sense strand
CTTGAACCTCGAGTTCCTTTTAGACAGTTCCAGATGAATGACCAAGACGGGTGAGTCCATTGCATTACAGTCACGTGTGTAGAGATGAGTGCGGTGGTGATTCTGGTCAAGATGAGGGGCTGATGAATAGAAGTGCTGTGTCTCCTGGAGACCACAGAGAACTTAACCAGCTCAGCGTGGCAGGGTGTGTGGGGTGGTGGCTGGGATTTGGAGCTGGATGACAGATTGAGTCATGATTTCAAGTGCCTGGTAGAGTTGAAGTTCTGGCACGTGTGTGTTGCTGCTGCCCTAGGCCTTAGCAACCAGCATGTAAAACTGCAGGACAAGGCAGAACTTCTTTCTGGGATGTACTCGTTTGCTCATTATATATTTCTTTTAAAGGAACTGATAGAAATAATTAAATCAAACATGAACCTTTGCAGTGTGGAATTTATTTTTGGAAAGGTATTTGATTTTGCTTCCGTCTGTATACTGGACATGATTCCATCATCTTTTCTTTTATCAGAAAAGAAAACAGGCTGGGATTGTCTCGCCCACTCCGCCCACTAAGGCAGC
.....................................................................................................................................................................................................................................................................................................................................................................................................................................((((((((((.......(((..((((........)))))))((((.......))))..))))))).))).................................................................
.....................................................................................................................................................................................................................................................................................................................................................................................................................406................................................................................................505................................................
SizePerfect hitTotal NormPerfect NormDRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)		SRR037938(GSM510476)
293Red. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		TAX577580(Rovira)
total RNA. (breast)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR343334SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		GSM532876(GSM532876)
G547T. (cervix)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR189783SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)		SRR191405(GSM715515)
55genomic small RNA (size selected RNA from t. (breast)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM416733(GSM416733)
HEK293. (cell line)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR040031(GSM532916)
G013T. (cervix)		SRR037931(GSM510469)
293GFP. (cell line)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037932(GSM510470)
293cand4_rep1. (cell line)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR343335TAX577579(Rovira)
total RNA. (breast)		SRR189786SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577744(Rovira)
total RNA. (breast)		TAX577589(Rovira)
total RNA. (breast)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR040024(GSM532909)
G613N. (cervix)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577745(Rovira)
total RNA. (breast)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189784
....................TAGACAGTTCCAGATGAATGACCAAGACGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3015.005.00--1.00---3.00---------1.00--------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................................................AATTTATTTTTGGAAAGGTATTTGATTTTGCTTCCGTCTGTATACTGGACATGATTCCATCATCTTTTCTTTTATCAG..................................................7815.005.005.00------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGAAAGGTATTTGATTTTGCTTCCGTCTGTATACTGGACATGATTCCATCATCTTTTCTTTTATCAG..................................................7014.004.004.00------------------------------------------------------------------------------
......................GACAGTTCCAGATGAATGACCAAGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.003.00-----------3.00-------------------------------------------------------------------
...............................AGATGAATGACCAAGACGGAAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................233.000.00-----3.00-------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGAAAACAGGCTGGGATTGT...........................2213.003.00-------------------------------------------1.00--------------1.00---1.00----------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCATCATCTTTTCTTTATG.....................................................193.000.00---------------------2.001.00--------------------------------------------------------
.................TTTTAGACAGTTCCAGATGAATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2313.003.00---2.00---1.00-----------------------------------------------------------------------
....................TAGACAGTTCCAGATGAATGACC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2313.003.00---2.00--------------------1.00------------------------------------------------------
.................................................................................................................................................................................TGGCAGGGTGTGTGGCTTG.......................................................................................................................................................................................................................................................................................................................................................................193.000.00----------3.00--------------------------------------------------------------------
..........................GTTCCAGATGAATGACCAAGACGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.002.00-----2.00-------------------------------------------------------------------------
..................TTTAGACAGTTCCAGATGAATGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................232.000.00-2.00-----------------------------------------------------------------------------
..................................................................................AGATGAGTGCGGTGGTGATTCTGGTCAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.002.00---------------------------------------------1.00----1.00----------------------------
.........................................................CATTGCATTACAGTCGGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................182.000.00-------------------2.00-----------------------------------------------------------
.................................ATGAATGACCAAGACGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1712.002.00----------------1.00-------------------1.00------------------------------------------
..........................................................................................................................................................................................................GGGATTTGGAGCTGGATG...............................................................................................................................................................................................................................................................................................................................................1812.002.00----2.00--------------------------------------------------------------------------
......................................................................................................................................................ACCACAGAGAACTTAAG....................................................................................................................................................................................................................................................................................................................................................................................................172.000.00-------------------------1.00-------------------------------1.00---------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGAAAACAGGCTGGGATTG............................2212.002.00-----------------1.00---------------------------------------------1.00---------------
..................TTTAGACAGTTCCAGATGAATGACCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.002.00-2.00-----------------------------------------------------------------------------
...........................................................................................................................TGAATAGAAGTGCTGTGTCTCCTG........................................................................................................................................................................................................................................................................................................................................................................................................................2412.002.00---------2.00---------------------------------------------------------------------
...................................................................................................................................................................................................GGTGGCTGGGATTTGGATGG....................................................................................................................................................................................................................................................................................................................................................202.000.00------------------2.00------------------------------------------------------------
............................TCCAGATGAATGACCAAGACGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................221.000.00--------------------------------------------------------1.00----------------------
.............................CCAGATGAATGACCAAGACGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................221.000.00-------------------------------------------------------------------1.00-----------
...........................................................................................................................................................................................................................................................AGAGTTGAAGTTCTGGCACGT...........................................................................................................................................................................................................................................................................................2111.001.00----------------------------1.00--------------------------------------------------
...........................................................................TGTGTAGAGATGAGTGCGGTGGTGATTCTGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................3111.001.00--------------1.00----------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCATCATCTTTTCTTTTATCAG..................................................2411.001.00------------------------------------------------1.00------------------------------
...................TTAGACAGTTCCAGATGAATGACCAAGACGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................321.000.00--1.00----------------------------------------------------------------------------
........................................................................................................................................................CACAGAGAACTTAACCAGCTCAGCGTGGCAG....................................................................................................................................................................................................................................................................................................................................................................................3111.001.00--------------------1.00----------------------------------------------------------
.................................ATGAATGACCAAGACGGAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.002.00-------------------------------------------------1.00-----------------------------
.............................................................................................................................................................................................TGGGGTGGTGGCTGGGATGGTT........................................................................................................................................................................................................................................................................................................................................................221.000.00-------------1.00-----------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAAACAGGCTGGGATTGTCTCG.......................2411.001.00---1.00---------------------------------------------------------------------------
................................GATGAATGACCAAGACG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.001.00-------------------------------1.00-----------------------------------------------
.........................................................................................................................................................ACAGAGAACTTAACCAGCTCAGCGTGGCA.....................................................................................................................................................................................................................................................................................................................................................................................2911.001.00----------------------------------------------1.00--------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGGATTGTCTCGCCCACTCCGCCC...........2611.001.00-----------------------1.00-------------------------------------------------------
.....................AGACAGTTCCAGATGAATGACCAAGACG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001.00--------1.00----------------------------------------------------------------------
........................CAGTTCCAGATGAATGACCAAGACGGAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................281.000.00--1.00----------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................TGCAGGACAAGGCAGAACT............................................................................................................................................................................................................................1911.001.00-1.00-----------------------------------------------------------------------------
..................TTTAGACAGTTCCAGATGAATGACC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001.00--------------------------------------1.00----------------------------------------
...........................................................................................................CAAGATGAGGGGCTGATGAATAGAAGTGCTG.................................................................................................................................................................................................................................................................................................................................................................................................................................3111.001.00---------------------------------------------------------------------1.00---------
.........................................................................................................................................................................................................TGGGATTTGGAGCTGGATGA..............................................................................................................................................................................................................................................................................................................................................2011.001.00-1.00-----------------------------------------------------------------------------
..............................................................................................................................................................................................................................AGATTGAGTCATGATTGA...........................................................................................................................................................................................................................................................................................................................181.000.00--------------------------------1.00----------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAACAGGCTGGGATTG............................1811.001.00---------1.00---------------------------------------------------------------------
................................GATGAATGACCAAGACGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................191.000.00---------------------------------------1.00---------------------------------------
........................................................................................................................TGATGAATAGAAGTGCTGTGTCTCCTGGA......................................................................................................................................................................................................................................................................................................................................................................................................................2911.001.00------------------------------------------------------------1.00------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGGCTGGGATTGTCTCGCCCACTCCGCC............3011.001.00--------------1.00----------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................ATTTCTTTTAAAGGAACTGATAGAAAT................................................................................................................................................................2711.001.00-----------------------------------------------------1.00-------------------------
....................TAGACAGTTCCAGATGAATGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................211.000.00-------1.00-----------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................GGCAGAACTTCTTTCTGGGATG...............................................................................................................................................................................................................2211.001.00----------------------------------------------------------------1.00--------------
.....................................................................GTCACGTGTGTAGAGATGAGTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001.00-----------------------------------1.00-------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAAACAGGCTGGGACGGG...........................201.000.00---------------1.00---------------------------------------------------------------
..................TTTAGACAGTTCCAGATGAATGACCAAGACGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3211.001.00---------------------------------------------------1.00---------------------------
........................CAGTTCCAGATGAATGACCAAGACGGAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................281.000.00--------------------------------------------------------------------------1.00----
...............CCTTTTAGACAGTTCCAGATGAATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001.00------------------------------------------------------------------1.00------------
............................................................................................................................................................................................................................................................GAGTTGAAGTTCTGGCACGTGTGTGTTGCTGC...............................................................................................................................................................................................................................................................................3211.001.00-----------------------------------------1.00-------------------------------------
....................................................................................................................................................................................................................................................................................................................................AAGGCAGAACTTCTTTCTGGGATG...............................................................................................................................................................................................................2411.001.00------------------------------1.00------------------------------------------------
.....................AGACAGTTCCAGATGAATGACCAAGACGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001.00--1.00----------------------------------------------------------------------------
.....ACCTCGAGTTCCTTTTAGACAGTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001.00----1.00--------------------------------------------------------------------------
.................TTTTAGACAGTTCCAGATGAATGACCAAGACGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................341.000.00--1.00----------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAAACAGGCTGGGATTGTC..........................2111.001.00-----------------1.00-------------------------------------------------------------
...........................................................................................................................................................................................TGTGGGGTGGTGGCTGGGATTTGGAGCTGG..................................................................................................................................................................................................................................................................................................................................................3011.001.00-----------------------------------------------------------1.00-------------------
........................CAGTTCCAGATGAATGACCAAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001.00----------------------------------------------------1.00--------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTTTTCTTTTATCACA.................................................181.000.00----------------------1.00--------------------------------------------------------
............................................................................................................................................................GAGAACTTAACCAGCTCAGCGTGGCA.....................................................................................................................................................................................................................................................................................................................................................................................2611.001.00-----------------------------------------------------------------------1.00-------
................................................................................................................................................................................................................................................................................GTGTGTTGCTGCTGCATTG........................................................................................................................................................................................................................................................................191.000.00----------------------------------------1.00--------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCTGGGATTGTCTCGCCC....................2011.001.00------------------------------------------1.00------------------------------------
...................................................................................................ATTCTGGTCAAGATGAGGGGCTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................231.000.00--------------------------1.00----------------------------------------------------
.................TTTTAGACAGTTCCAGATGAATC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................231.000.00-------1.00-----------------------------------------------------------------------
.......................................GACCAAGACGGGTGAGTCCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001.00--1.00----------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAAAACAGGCTGGGATTGTCTC........................2411.001.00--------------------------------------------1.00----------------------------------
................CTTTTAGACAGTTCCAGATGAATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001.00-----------------------------1.00-------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAAGAAAACAGGCTGGGA...............................2021.001.00-1.00-----------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................CCTAGGCCTTAGCAACC...........................................................................................................................................................................................................................................................1711.001.00----1.00--------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGCTGGGATTGTCTCG.......................1811.001.00---------------------------------------------------------------------------1.00---
...........................................................................TGTGTAGAGATGAGTGCGGTGGGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................241.000.00------------1.00------------------------------------------------------------------
.................TTTTAGACAGTTCCAGATGAATGACC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001.00--------1.00----------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGAAAACAGGCTGGGATTGTCTCG.......................2611.001.00---1.00---------------------------------------------------------------------------
.........................................................................................................................GATGAATAGAAGTGCTGTGTC.............................................................................................................................................................................................................................................................................................................................................................................................................................2111.001.00------------1.00------------------------------------------------------------------
....................TAGACAGTTCCAGATGAATGACCAAGACGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3111.005.00--1.00----------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTTTTCTTTTATCACAG................................................191.000.00---------------------------------1.00---------------------------------------------
.................................................................................................................................................................................................................................................................................TGTGTTGCTGCTGCCCTAGGCCTTAGCAAC............................................................................................................................................................................................................................................................3011.001.00---------------1.00---------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAAGAAAACAGGCTGGGATT.............................2211.001.00------------------------------------------------------1.00------------------------
.................................................................................GAGATGAGTGCGGTGGTGAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001.00--------------------1.00----------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................AATAATTAAATCAAACGT.................................................................................................................................................181.000.00----------------------------------------------------------------------------1.00--
................CTTTTAGACAGTTCCAGATGAATGACC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001.00--------1.00----------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCCACTCCGCCCAGACG......191.000.00-------------------------------------------------------------1.00-----------------
....................................................................................................................................................................................................................................................................GTTCTGGCACGTGTGTG......................................................................................................................................................................................................................................................................................1711.001.00-----------------------------------------------1.00-------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAAAGAAAACAGGCTGGGAT..............................2211.001.00-----------------------------------------------------------------1.00-------------
...........................................................................................................................................................................................................................................................................................................................................................................................................................................AATTTATTTTTGGAACCGG.............................................................................................................191.000.00-------------------------------------------------------1.00-----------------------
................................................................TTACAGTCACGTGTGTAGAGATGAGTGCGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.001.00------------------------------------------------------------------------1.00------
.........................................................................CGTGTGTAGAGATGAGTGCGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001.00----1.00--------------------------------------------------------------------------
....................................................................................................................................................................................CAGGGTGTGTGGGGTGGTGGTCTA...............................................................................................................................................................................................................................................................................................................................................................241.000.00-------------------------------------------------------------------------1.00-----
..................................................................................................................................................................................GGCAGGGTGTGTGGGGTCCGT....................................................................................................................................................................................................................................................................................................................................................................211.000.00-------------1.00-----------------------------------------------------------------
..................................TGAATGACCAAGACGGCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................181.000.00--------------------------------------------------------------------1.00----------
........................CAGTTCCAGATGAATGACCAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001.00-------------------------------------1.00-----------------------------------------
.........................................................................................................................................GTGTCTCCTGGAGACCACAGAGAACTTAACC...................................................................................................................................................................................................................................................................................................................................................................................................3111.001.00---------------------------1.00---------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATTTATTTTTGG...................................................................................................................1720.500.50-----------------------------------------------------------------------------0.50-
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAAACAGGCTGGGATT.............................1820.500.50------------0.50------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGAAAACAGGCTGGGA...............................1830.330.33-----------------------0.33-------------------------------------------------------
......................................................................................................................................................ACCACAGAGAACTTA......................................................................................................................................................................................................................................................................................................................................................................................................1570.140.14------------------------------------------------------------------------------0.14

Antisense strand
CTTGAACCTCGAGTTCCTTTTAGACAGTTCCAGATGAATGACCAAGACGGGTGAGTCCATTGCATTACAGTCACGTGTGTAGAGATGAGTGCGGTGGTGATTCTGGTCAAGATGAGGGGCTGATGAATAGAAGTGCTGTGTCTCCTGGAGACCACAGAGAACTTAACCAGCTCAGCGTGGCAGGGTGTGTGGGGTGGTGGCTGGGATTTGGAGCTGGATGACAGATTGAGTCATGATTTCAAGTGCCTGGTAGAGTTGAAGTTCTGGCACGTGTGTGTTGCTGCTGCCCTAGGCCTTAGCAACCAGCATGTAAAACTGCAGGACAAGGCAGAACTTCTTTCTGGGATGTACTCGTTTGCTCATTATATATTTCTTTTAAAGGAACTGATAGAAATAATTAAATCAAACATGAACCTTTGCAGTGTGGAATTTATTTTTGGAAAGGTATTTGATTTTGCTTCCGTCTGTATACTGGACATGATTCCATCATCTTTTCTTTTATCAGAAAAGAAAACAGGCTGGGATTGTCTCGCCCACTCCGCCCACTAAGGCAGC
.....................................................................................................................................................................................................................................................................................................................................................................................................................................((((((((((.......(((..((((........)))))))((((.......))))..))))))).))).................................................................
.....................................................................................................................................................................................................................................................................................................................................................................................................................406................................................................................................505................................................
SizePerfect hitTotal NormPerfect NormDRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)		SRR037938(GSM510476)
293Red. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		TAX577580(Rovira)
total RNA. (breast)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR343334SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		GSM532876(GSM532876)
G547T. (cervix)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR189783SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)		SRR191405(GSM715515)
55genomic small RNA (size selected RNA from t. (breast)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM416733(GSM416733)
HEK293. (cell line)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR040031(GSM532916)
G013T. (cervix)		SRR037931(GSM510469)
293GFP. (cell line)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037932(GSM510470)
293cand4_rep1. (cell line)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR343335TAX577579(Rovira)
total RNA. (breast)		SRR189786SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577744(Rovira)
total RNA. (breast)		TAX577589(Rovira)
total RNA. (breast)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR040024(GSM532909)
G613N. (cervix)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577745(Rovira)
total RNA. (breast)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189784
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