ID: uc004can.3_intron_18_0_chr9_134357196_f.3p
GENE: (19)
chr9:134357558-134357807+


(1)
AGO2.ip 		(4)
B-CELL 		(2)
BRAIN 		(4)
BREAST 		(7)
CELL-LINE 		(1)
HEART 		(4)
HELA 		(6)
LIVER 		(1)
OTHER 		(14)
SKIN 		(1)
TESTES 		(1)
UTERUS

Sense strand
TCACGAGCTCTATCGGGGTTGGTGTGTTTGGCCACACGTAAGTTGTCAGGCATCCTCAGCAGGGCAGGATCAAGATCAGGACCAGACTTGGCAAGGGACAGGCAGCTGGGGTAGAAAAGTCTCTGTGCCACATGCAGTTTTACTCTCTGGATAATCGAGTTGGGAGTTTGAGGCTATAACCCATTTTGTGCTCTGCACAGCAGGGTTTTAAGAGCAGCCAGGGAGATAGTGGCGTTGACTTGAGTGCCGA
........................................................................................(((((((((((.....((....))......)))))).))))).........(((..((((.(((......))).))))..)))...............................................................................
........................................................................................89................................................................................171.............................................................................
SizePerfect hitTotal NormPerfect NormDRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR189784GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR029124(GSM416753)
HeLa. (hela)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR189785SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR029127(GSM416756)
A549. (cell line)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		SRR189786TAX577453(Rovira)
total RNA. (breast)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191601(GSM715711)
58genomic small RNA (size selected RNA from t. (breast)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
....................................................................................................................................TGCAGTTTTACTCTCTGGATAATCGAGTTGGGAGTTTGAGGCTATAACCCATTTTGTGCTCTGCACAG..................................................6819.009.00-9.00----------------------------------------------
.................................................................................................................................ACATGCAGTTTTACTCTCTGGATAATCGAGTTGGGAGTTTGAGGCTATAACCCATTTTGTGCTCTGC......................................................6718.008.008.00-----------------------------------------------
....................................................................................................................................TGCAGTTTTACTCTCTGGATAATCGAGTTGGGAGTTTGAGGCTATAACCCATTTTGTGCTCTGCACAGC.................................................6917.007.007.00-----------------------------------------------
.................................................................................................................................ACATGCAGTTTTACTCTCTGGATAATCGAGTTGGGAGTTTGAGGCTATAACCCATTTTGTGCTCTGCACAGCAG...............................................7417.007.00-7.00----------------------------------------------
...........................................................................................................................................TTACTCTCTGGATAATCGAGTTGGGAGTTTGAGGCTATAACCCATTTTGTGCTCTGCAC....................................................5916.006.006.00-----------------------------------------------
......................................................................................................................................CAGTTTTACTCTCTGGATAATCGAGTTGGGAGTTTGAGGCTATAACCCATTTTGTGCTCTGCACAGCAG...............................................6915.005.005.00-----------------------------------------------
......................................................................................................................................CAGTTTTACTCTCTGGATAATCGAGTTGGGAGTTTGAGGCTATAACCCATTTTGTGCTCTGCA.....................................................6314.004.004.00-----------------------------------------------
.............................................................................................................................................................................................................................GGAGATAGTGGCGTTGACTT.........2014.004.00--3.00--1.00------------------------------------------
...................................................................................................................................................TGGATAATCGAGTTGGGAGTTTGAGGCTATAACCCATTTTGTGCTCTGCACAGCA................................................5514.004.004.00-----------------------------------------------
...............................................................................................................................................................................................................................AGATAGTGGCGTTGACTTG........1913.003.00--1.00-------1.00-----------------1.00-------------------
...........................................................................................................................................................................................................................AGGGAGATAGTGGCGTTGACTT.........2213.003.00-------------1.00--------------------------1.001.00------
..............................................................................................................................................................................................................................GAGATAGTGGCGTTGACTTGAGTGCCGA2813.003.00----3.00-------------------------------------------
...............................................................................................................................CCACATGCAGTTTTACTCTCTGGATAATCGAGTTGGGAGTTTGAGGCTATAACCCATTTTGTGCTCTGCACAGCAG...............................................7612.002.002.00-----------------------------------------------
...............................................................................................................................................................................................................................AGATAGTGGCGTTGACTT.........1812.002.00--2.00---------------------------------------------
.........................................................................................................................................................................................................................CCAGGGAGATAGTGGCGTTGACTC.........242.000.00---2.00--------------------------------------------
...........................................................................................................................................................................................................................AGGGAGATAGTGGCGTTGACTTGAG......2512.002.00------2.00-----------------------------------------
....................................................................................................................................................GGATAATCGAGTTGGGAGT...................................................................................1911.001.00---------------------------------1.00--------------
................................................................................................................................................................................................................................GATAGTGGCGTTGACTTG........1811.001.00--1.00---------------------------------------------
.................................................................................................................................................................................................................AAGAGCAGCCAGGGAGATAGTGGCGTTGACTTG........3311.001.00------------------------------------1.00-----------
.............................................................................................AGGGACAGGCAGCTGGTTGG.........................................................................................................................................201.000.00---------------1.00--------------------------------
..............GGGGTTGGTGTGTTTGGCC.........................................................................................................................................................................................................................1911.001.00------------------1.00-----------------------------
..........................................................................................................................................................TCGAGTTGGGAGTTTGAG..............................................................................1811.001.00--------------------------------------1.00---------
........................................................................................TGGCAAGGGACAGGCAGCTGGGGTAGAAAAGT..................................................................................................................................3211.001.00-----------1.00------------------------------------
............................................................................................................................................................................................................GTTTTAAGAGCAGCCAGGGAGATAGTGG..................2811.001.00---------1.00--------------------------------------
...........................................................................TCAGGACCAGACTTGGCAAGGG.........................................................................................................................................................2211.001.00--------------------------1.00---------------------
..........TATCGGGGTTGGTGTGTTTGGCC.........................................................................................................................................................................................................................2311.001.00---------------------1.00--------------------------
.........................................................................................................CTGGGGTAGAAAAGTCTCTGTGC..........................................................................................................................2311.001.00-------------------------------------1.00----------
...CGAGCTCTATCGGGGAAAG....................................................................................................................................................................................................................................191.000.00---------------------------1.00--------------------
.........................................................AGCAGGGCAGGATCAAGA...............................................................................................................................................................................1811.001.00--------1.00---------------------------------------
............TCGGGGTTGGTGTGTTTGGCCACAC.....................................................................................................................................................................................................................2511.001.00---------1.00--------------------------------------
...........................................................................................................................................................................................................................AGGGAGATAGTGGCGTTGACTTG........2311.001.00--------1.00---------------------------------------
..................................................................................................................................................................................................................................TAGTGGCGTTGACTTGAGTGT...211.000.00------------------------1.00-----------------------
....................................................................................................................................................................................................................................GTGGCGTTGACTTGAGTG....1811.001.00-------1.00----------------------------------------
........................................................................................................................................................................................................................GCCAGGGAGATAGTGGCGTTGACTTG........2611.001.00-----------------------1.00------------------------
.......................................................................AAGATCAGGACCAGACTTGGC..............................................................................................................................................................2111.001.00------------1.00-----------------------------------
.........CTATCGGGGTTGGTGTGGT..............................................................................................................................................................................................................................191.000.00-----------------1.00------------------------------
...........................................................................................................................................................................................................................AGGGAGATAGTGGCGTTGACTTGAGTG....2711.001.00--------------------------------1.00---------------
................................................................................................................................................................................TAACCCATTTTGTGCTCTGCACAGC.................................................2511.001.00-----------------------------------1.00------------
..................................................................................................................................................................................................................................TAGTGGCGTTGACTTGAG......1811.001.00-----------1.00------------------------------------
...........................................................................TCAGGACCAGACTTGGCAAGGGACAG.....................................................................................................................................................2611.001.00-------------1.00----------------------------------
............................................................AGGGCAGGATCAAGATCAGGACC.......................................................................................................................................................................2311.001.00----------------------------------1.00-------------
...................................................................GATCAAGATCAGGACCAGACTTGGCAAGGG.........................................................................................................................................................3011.001.00------------1.00-----------------------------------
......................................................................................................................................................................................................................CAGCCAGGGAGATAGTGGCGTTGAC...........2511.001.00-------------------------------1.00----------------
........................................AGTTGTCAGGCATCCTCAGCAGGGCAGGACC...................................................................................................................................................................................311.000.00---1.00--------------------------------------------
.........................................................................................................................................TTTTACTCTCTGGATAACC..............................................................................................191.000.00---1.00--------------------------------------------
......................................................................................................................................................................................................................CAGCCAGGGAGATAGTGGCGTTGACTTGAGC.....311.000.00---1.00--------------------------------------------
...............................................................................................................................................................................................................TTAAGAGCAGCCAGGGAGAC.......................201.000.00---1.00--------------------------------------------
............................................................................................................................................................................................................................GGGAGATAGTGGCGTTGACT..........2011.001.00--1.00---------------------------------------------
........................................................................................................................................GTTTTACTCTCTGGATAAA...............................................................................................191.000.00----------------------1.00-------------------------
........TCTATCGGGGTTGGTGTGTTT.............................................................................................................................................................................................................................2111.001.00-------------------------1.00----------------------
............................................................................................................................................................................................................................GGGAGATAGTGGCGTTGACTT.........2111.001.00-----1.00------------------------------------------
..........................................................................................................................................................................................................GGGTTTTAAGAGCAGCCAGGGAGATA......................2611.001.00--------------1.00---------------------------------
............TCGGGGTTGGTGTGTTTATTT.........................................................................................................................................................................................................................211.000.00-------------------------------------------1.00----
.......................GTGTTTGGCCACACGTAAGTTGT............................................................................................................................................................................................................2311.001.00---------------------------------------1.00--------
...........................................................................................................................................................................................................................AGGGAGATAGTGGCGTTGACT..........2111.001.00--------------------1.00---------------------------
.............................................................................................................................................................................................................................GGAGATAGTGGCGTTGACTTG........2111.001.00-------1.00----------------------------------------
...............................................................................................................................................................................................................................AGATAGTGGCGTTGACTTGAG......2111.001.00------1.00-----------------------------------------
................................................................................................................................................................................................................TAAGAGCAGCCAGGGAGATAGTGGC.................2511.001.00----------1.00-------------------------------------
.................................................................................................................................................................................................................................ATAGTGGCGTTGACTTTTT......191.000.00------------------------------------------1.00-----
...............................................................................................................................................................................................................................AGATAGTGGCGTTGACTTGAGTG....2311.001.00-----1.00------------------------------------------
..............................................................................................................GTAGAAAAGTCTCTGTGCCACATGC...................................................................................................................2511.001.00-----------------------------1.00------------------
............................................................................................................................................................................................................................GGGAGATAGTGGCGTTGA............1820.500.50---------------------------------------------0.50--
....................................................................ATCAAGATCAGGACCAG.....................................................................................................................................................................1720.500.50----------------------------------------------0.50-
....................................................................................................................................................GGATAATCGAGTTGG.......................................................................................1520.500.50--------------------------------------------0.50---
................................................................................................................................................................................................................TAAGAGCAGCCAGGGAGA........................1830.330.33-----------------------------------------------0.33

Antisense strand
TCACGAGCTCTATCGGGGTTGGTGTGTTTGGCCACACGTAAGTTGTCAGGCATCCTCAGCAGGGCAGGATCAAGATCAGGACCAGACTTGGCAAGGGACAGGCAGCTGGGGTAGAAAAGTCTCTGTGCCACATGCAGTTTTACTCTCTGGATAATCGAGTTGGGAGTTTGAGGCTATAACCCATTTTGTGCTCTGCACAGCAGGGTTTTAAGAGCAGCCAGGGAGATAGTGGCGTTGACTTGAGTGCCGA
........................................................................................(((((((((((.....((....))......)))))).))))).........(((..((((.(((......))).))))..)))...............................................................................
........................................................................................89................................................................................171.............................................................................
SizePerfect hitTotal NormPerfect NormDRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR189784GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR029124(GSM416753)
HeLa. (hela)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR189785SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR029127(GSM416756)
A549. (cell line)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		SRR189786TAX577453(Rovira)
total RNA. (breast)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191601(GSM715711)
58genomic small RNA (size selected RNA from t. (breast)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
....................................................................................................................................................................................................................AGCAGCCAGGGAGATAGTTTAG................ 221.000.00----------------1.00-------------------------------
...............................................AGGCATCCTCAGCAGCTGA........................................................................................................................................................................................ 191.000.00-------------------1.00----------------------------
.............................................................................................................................TGCCACATGCAGTTTTTTGG......................................................................................................... 201.000.00---1.00--------------------------------------------
..............................................................GGCAGGATCAAGATCAGT.......................................................................................................................................................................... 181.000.00------------------------------1.00-----------------