ID: uc004cab.1_intron_3_0_chr9_133990006_f.5p
GENE: (4)
chr9:133989956-133990205+


(1)
AGO2.ip 		(6)
BRAIN 		(8)
BREAST 		(7)
CELL-LINE 		(2)
CERVIX 		(1)
FIBROBLAST 		(5)
HEART 		(1)
KIDNEY 		(2)
LIVER 		(2)
OTHER 		(10)
SKIN 		(1)
TESTES 		(2)
UTERUS

Sense strand
ATTTCCAGAGAAGTACATGGAGTTTGACCTGAACAATGAAGGCGAGATTGGTGAGTGAAGCCTTGAGTGTGTTTAGGGAGGAGGGTGTTAAGTGGGTAGAGGGCTTGAGGGACCCTCTGTGCGGGTGAGGGGCATGGGGCAGTCCGGAAGGCTGGTGAATATGTTGCGCCGAGCCAGCCCCAGCCCCTTGCCTTCTGCCCTGGCACCACTGCCCTCAGACTCCTCCAGACCCTTTGATCCCCTACTGCTT
...............................................................................(((((((.((...(((((.....))))).)).)))))))....................................................................................................................................
.....................................................................70.................................................121...............................................................................................................................
SizePerfect hitTotal NormPerfect NormRoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR553576(SRX182782)
source: Testis. (testes)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR553575(SRX182781)
source: Kidney. (Kidney)		TAX577744(Rovira)
total RNA. (breast)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR189784SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR189782GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577588(Rovira)
total RNA. (breast)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR040009(GSM532894)
G727T. (cervix)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577739(Rovira)
total RNA. (breast)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577742(Rovira)
total RNA. (breast)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577579(Rovira)
total RNA. (breast)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040012(GSM532897)
G648N. (cervix)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		TAX577743(Rovira)
total RNA. (breast)		SRR191394(GSM715504)
23genomic small RNA (size selected RNA from t. (breast)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
..........................................................................AGGGAGGAGGGTGTTTAGT.............................................................................................................................................................1921.000.0021.00------------------------------------------------
..........................................................................AGGGAGGAGGGTGTTTAGG.............................................................................................................................................................199.000.009.00------------------------------------------------
..........................................................................AGGGAGGAGGGTGTTTAAT.............................................................................................................................................................198.000.008.00------------------------------------------------
...............CATGGAGTTTGACCTGAACAATGAAGGC...............................................................................................................................................................................................................2816.006.00-4.00--2.00--------------------------------------------
.................TGGAGTTTGACCTGAACAATGAAGGC...............................................................................................................................................................................................................2616.006.00-6.00-----------------------------------------------
..........................................................................AGGGAGGAGGGTGTTTGGG.............................................................................................................................................................195.000.005.00------------------------------------------------
........................................................................TTAGGGAGGAGGGTGTATAG..............................................................................................................................................................203.000.00-------1.00-----1.00--------------------1.00--------------
...........AGTACATGGAGTTTGACCTGAACAATGAAGG................................................................................................................................................................................................................3112.002.002.00------------------------------------------------
.............................TGAACAATGAAGGCGAGATTGACC.....................................................................................................................................................................................................242.000.00-1.00----1.00------------------------------------------
..........................................................................AGGGAGGAGGGTGTTTAAG.............................................................................................................................................................192.000.002.00------------------------------------------------
...............................AACAATGAAGGCGAGATTG........................................................................................................................................................................................................1912.002.00-------------------------------------1.00--------1.00--
..............................................ATTGGTGAGTGAAGCATT..........................................................................................................................................................................................182.000.00----------------1.00-----------------------1.00--------
......AGAGAAGTACATGGAGTTTGACCTGAAC........................................................................................................................................................................................................................2812.002.00-2.00-----------------------------------------------
..........................ACCTGAACAATGAAGGCGAGA...........................................................................................................................................................................................................2112.002.00-----------------1.00------------------------1.00------
.......GAGAAGTACATGGAGTTTGACCTGAAC........................................................................................................................................................................................................................2712.002.00-1.00----------1.00------------------------------------
........AGAAGTACATGGAGTTTGACCTGAACAATGA...................................................................................................................................................................................................................3112.002.00-----------2.00-------------------------------------
.......................TTGACCTGAACAATGAAGGCGAGATTG........................................................................................................................................................................................................2712.002.00-2.00-----------------------------------------------
..........................................................................AGGGAGGAGGGTGTTTAG..............................................................................................................................................................182.000.002.00------------------------------------------------
.........................................................................TAGGGAGGAGGGTGTGGTT..............................................................................................................................................................191.000.00---------1.00---------------------------------------
....................AGTTTGACCTGAACAATGAAGGCGAG............................................................................................................................................................................................................2611.001.00----1.00--------------------------------------------
.......GAGAAGTACATGGAGTTTGACCTGAACA.......................................................................................................................................................................................................................2811.001.00----------1.00--------------------------------------
............................CTGAACAATGAAGGCGAGATTGA.......................................................................................................................................................................................................231.000.00---------------------------------------1.00---------
.....................GTTTGACCTGAACAATGAAGGCGAGATTGACCT....................................................................................................................................................................................................331.000.00---1.00---------------------------------------------
.............................................................................................................................TGAGGGGCATGGGGCAACAG.........................................................................................................201.000.00-------------1.00-----------------------------------
..................................................................................................GAGGGCTTGAGGGACTACG.....................................................................................................................................191.000.00---------------------1.00---------------------------
............................CTGAACAATGAAGGCGAGATTGAC......................................................................................................................................................................................................241.000.00---------------------------1.00---------------------
.........................................................................TAGGGAGGAGGGTGTTAAATT............................................................................................................................................................211.000.00--1.00----------------------------------------------
.......................TTGACCTGAACAATGAAGGCGAGAT..........................................................................................................................................................................................................2511.001.00--------------------------------------------1.00----
......................................................................................GTTAAGTGGGTAGAGTCCG.................................................................................................................................................191.000.00---------------------------------1.00---------------
.............................TGAACAATGAAGGCGAGATTGACCT....................................................................................................................................................................................................251.000.00----------------------1.00--------------------------
.......GAGAAGTACATGGAGTTTGACCTGAACAATG....................................................................................................................................................................................................................3111.001.00-----------------------------------------1.00-------
.........................................................................TAGGGAGGAGGGTGTATG...............................................................................................................................................................181.000.00-------------------------1.00-----------------------
.................................................................................................................................................GGAAGGCTGGTGAATAT........................................................................................1711.001.00-------------------1.00-----------------------------
...........................CCTGAACAATGAAGGCGAGATTGACC.....................................................................................................................................................................................................261.000.00---1.00---------------------------------------------
........................................................................TTAGGGAGGAGGGTGTG.................................................................................................................................................................171.000.00-----1.00-------------------------------------------
...............CATGGAGTTTGACCTGAACAATGAAGGCGAGATTG........................................................................................................................................................................................................3511.001.00----------------------------1.00--------------------
.............................TGAACAATGAAGGCGAGATT.........................................................................................................................................................................................................2011.001.00-1.00-----------------------------------------------
.........................................................................TAGGGAGGAGGGTGTTTTA..............................................................................................................................................................191.000.00--------------------------1.00----------------------
..........................................................................AGGGAGGAGGGTGTTTAA..............................................................................................................................................................181.000.001.00------------------------------------------------
........................................................................TTAGGGAGGAGGGTGTATGG..............................................................................................................................................................201.000.00-----------------------------1.00-------------------
........................................................................TTAGGGAGGAGGGTGTAT................................................................................................................................................................181.000.00--------1.00----------------------------------------
...............CATGGAGTTTGACCTGAACA.......................................................................................................................................................................................................................2011.001.00------1.00------------------------------------------
........................................................................TTAGGGAGGAGGGTGTTAAA..............................................................................................................................................................201.000.00-----1.00-------------------------------------------
..............ACATGGAGTTTGACCTGAACAATGAAGGCGAGATT.........................................................................................................................................................................................................3511.001.001.00------------------------------------------------
..........................................................................AGGGAGGAGGGTGTTTATT.............................................................................................................................................................191.000.00---------------------------------------------1.00---
.........................................................................TAGGGAGGAGGGTGTTGCGT.............................................................................................................................................................201.000.00--1.00----------------------------------------------
....................AGTTTGACCTGAACAATGAAGGC...............................................................................................................................................................................................................2311.001.00----1.00--------------------------------------------
.........................................................................TAGGGAGGAGGGTGTATGG..............................................................................................................................................................191.000.00--------------------1.00----------------------------
............................CTGAACAATGAAGGCGAGATTGACC.....................................................................................................................................................................................................251.000.00-------------------------------------------1.00-----
.............TACATGGAGTTTGACCTGAACAATGAAGGC...............................................................................................................................................................................................................3011.001.00-1.00-----------------------------------------------
.................TGGAGTTTGACCTGAACAATGAAGGCG..............................................................................................................................................................................................................2711.001.00-1.00-----------------------------------------------
............GTACATGGAGTTTGACCTGAACAATGAAGGC...............................................................................................................................................................................................................3111.001.001.00------------------------------------------------
......................TTTGACCTGAACAATGAAGGCG..............................................................................................................................................................................................................2211.001.00--------------1.00----------------------------------
......................TTTGACCTGAACAATGAAGG................................................................................................................................................................................................................2011.001.00---------------1.00---------------------------------
.........................................................................TAGGGAGGAGGGTGTTAAA..............................................................................................................................................................191.000.00--1.00----------------------------------------------
...............CATGGAGTTTGACCTGAACAATGAAGGCGAGA...........................................................................................................................................................................................................3211.001.00---------------1.00---------------------------------
........................................................................TTAGGGAGGAGGGTGTTTGGG.............................................................................................................................................................211.000.00-----1.00-------------------------------------------
.........................................................................TAGGGAGGAGGGTGTTTGGT.............................................................................................................................................................201.000.00---------1.00---------------------------------------
..............ACATGGAGTTTGACCTGAACAATGAAGG................................................................................................................................................................................................................2811.001.00---1.00---------------------------------------------
.........GAAGTACATGGAGTTTGACCTGAAC........................................................................................................................................................................................................................2511.001.00----------1.00--------------------------------------
..........................................................................AGGGAGGAGGGTGTTTTGT.............................................................................................................................................................191.000.001.00------------------------------------------------
...............CATGGAGTTTGACCTGAACAATGAAGGCG..............................................................................................................................................................................................................2911.001.00------------------1.00------------------------------
......................TTTGACCTGAACAATGAAGGCGA.............................................................................................................................................................................................................2311.001.00--------------1.00----------------------------------
.........................................................................TAGGGAGGAGGGTGTAAAG..............................................................................................................................................................191.000.00------------------------------1.00------------------
..........................................................................AGGGAGGAGGGTGTTATTTT............................................................................................................................................................201.000.00-------------------------------1.00-----------------
...........................CCTGAACAATGAAGGCGAG............................................................................................................................................................................................................1911.001.00-----------------------1.00-------------------------
...............................................................................................................................................CCGGAAGGCTGGTGAATAT........................................................................................1911.001.00------------------------------------1.00------------
.........................................................................TAGGGAGGAGGGTGTTTATT.............................................................................................................................................................201.000.00--1.00----------------------------------------------
.........................................................................TAGGGAGGAGGGTGTTAAAGTC...........................................................................................................................................................221.000.00--1.00----------------------------------------------
..........AAGTACATGGAGTTTGACCTGAACAATGAAGGCGAG............................................................................................................................................................................................................3611.001.00-----------------------------------1.00-------------
....................................................................................................................................................AGGCTGGTGAATATGGCA....................................................................................181.000.00--------------------------------------1.00----------
...........AGTACATGGAGTTTGACCTGAACAATGAAGGCGAG............................................................................................................................................................................................................3511.001.00--------1.00----------------------------------------
............................CTGAACAATGAAGGCGAGATTGACCT....................................................................................................................................................................................................261.000.00------------1.00------------------------------------
................................................TGGTGAGTGAAGCCTCGCT.......................................................................................................................................................................................191.000.00-------1.00-----------------------------------------

Antisense strand
ATTTCCAGAGAAGTACATGGAGTTTGACCTGAACAATGAAGGCGAGATTGGTGAGTGAAGCCTTGAGTGTGTTTAGGGAGGAGGGTGTTAAGTGGGTAGAGGGCTTGAGGGACCCTCTGTGCGGGTGAGGGGCATGGGGCAGTCCGGAAGGCTGGTGAATATGTTGCGCCGAGCCAGCCCCAGCCCCTTGCCTTCTGCCCTGGCACCACTGCCCTCAGACTCCTCCAGACCCTTTGATCCCCTACTGCTT
...............................................................................(((((((.((...(((((.....))))).)).)))))))....................................................................................................................................
.....................................................................70.................................................121...............................................................................................................................
SizePerfect hitTotal NormPerfect NormRoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR553576(SRX182782)
source: Testis. (testes)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR553575(SRX182781)
source: Kidney. (Kidney)		TAX577744(Rovira)
total RNA. (breast)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR189784SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR189782GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577588(Rovira)
total RNA. (breast)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR040009(GSM532894)
G727T. (cervix)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577739(Rovira)
total RNA. (breast)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577742(Rovira)
total RNA. (breast)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577579(Rovira)
total RNA. (breast)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040012(GSM532897)
G648N. (cervix)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		TAX577743(Rovira)
total RNA. (breast)		SRR191394(GSM715504)
23genomic small RNA (size selected RNA from t. (breast)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
....................................................................................................................................................................................................................CCTCAGACTCCTCCACATT................... 191.000.00---1.00---------------------------------------------
...............................................................................................................................................................................................................ACTGCCCTCAGACTCCTT......................... 181.000.00------------------------1.00------------------------
.............................................................CCCTAAACACACTCAAG............................................................................................................................................................................ 1711.001.00-----------------------------------------------1.00-
..............................................................................................................................................................................CAGCCCCAGCCCCTTCAG.......................................................... 181.000.00--------------------------------1.00----------------
.......................................................CACACTCAAGGCTTCA................................................................................................................................................................................... 1660.170.17------------------------------------------------0.17