ID: uc004btg.1_intron_1_0_chr9_130876966_r
GENE: LOC100289019(3)
chr9:130876916-130877402-


(3)
AGO2.ip
(1)
AGO3.ip
(11)
B-CELL
(8)
BRAIN
(15)
BREAST
(43)
CELL-LINE
(2)
CERVIX
(1)
FIBROBLAST
(9)
HEART
(5)
HELA
(1)
KIDNEY
(4)
LIVER
(3)
OTHER
(22)
SKIN
(1)
XRN.ip

Sense strand
GCCTCCTGGCTGCGAGGAGGCAGCCAGGGACCAGGTGCCACCCTTCTGAGGTGAGGCAAGGAATGCCTGTCCCTTGGGCACGTCTAACTTGGTGAAGGTCCCACGGGTGGGTTGTGGCATGGTTCCAGCTTGCCGGGTCCGATGTGGGCAGCAGCTCTCTGCCTTGCCCCAAGTTCCTGGTGGGCGGCCCCAGCAGAGCCCGCCGCAGCTTCACTCCCCTGCGTGCCACCTGCCAGTCGGGGGTCCACTGCATCCTAGGTCCTGGGCAAGTCCCCTCCCCTCTTGAAACTTTAGTTTCCTCCCCTGTGAAATGGGGACGTGGCGGTGGTGGCACCTCCTACACCTGCTGAGAGCTAAGTGAAGTCGTGCGTGAGCAGTGCCCCTGCGAGGGGGCCCACCGGACCACACGGCTCAAGTGGCTCTGGATTTCCTCGCAGACACCTGAGATCCCAGGCCCGAGAGGATGAAGGCGGGATTACCTGGAGCG
.......................................................................................................................................................................................................................................................................................................................................................((((..(((((((..((.((((((((....))...((((((....))))))............))))))))..)))))))((....))..))))..................................................
.................................................................................................................................................................................................................................................................................................................................................338................................................................................................437................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR189782SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR343334SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR037935(GSM510473)
293cand3. (cell line)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR189786SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189784SRR029124(GSM416753)
HeLa. (hela)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR037937(GSM510475)
293cand2. (cell line)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR191610(GSM715720)
195genomic small RNA (size selected RNA from . (breast)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR343335SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577745(Rovira)
total RNA. (breast)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR029125(GSM416754)
U2OS. (cell line)
TAX577579(Rovira)
total RNA. (breast)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR037936(GSM510474)
293cand1. (cell line)
SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR040028(GSM532913)
G026N. (cervix)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR343336SRR191407(GSM715517)
81genomic small RNA (size selected RNA from t. (breast)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191588(GSM715698)
52genomic small RNA (size selected RNA from t. (breast)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR038855(GSM458538)
D10. (cell line)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)
SRR029128(GSM416757)
H520. (cell line)
SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
TAX577739(Rovira)
total RNA. (breast)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040039(GSM532924)
G531T. (cervix)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)
SRR191559(GSM715669)
65genomic small RNA (size selected RNA from t. (breast)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR038859(GSM458542)
MM386. (cell line)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
TAX577742(Rovira)
total RNA. (breast)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR037941(GSM510479)
293DroshaTN. (cell line)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
DRR001483(DRX001037)
"Hela long cytoplasmic cell fraction, control. (hela)
SRR191600(GSM715710)
90genomic small RNA (size selected RNA from t. (breast)
GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR029132(GSM416761)
MB-MDA231. (cell line)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR038856(GSM458539)
D11. (cell line)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR189787SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCTCTGGATTTCCTCGCAGT.................................................221161.0021.0045.00-16.00-3.00-5.00--5.002.00-3.00-3.00-3.001.003.001.00-2.00-2.003.002.001.00-3.001.00-2.002.00--2.001.001.00-1.001.001.001.00---1.002.001.001.001.002.002.00-1.00--1.00-1.001.001.001.001.00-1.001.00----1.001.00-1.00----1.00----1.00------1.00--1.00--1.00-1.001.001.001.00-1.00-1.00-1.00--1.001.001.00-1.001.001.001.001.001.00--1.001.00------
...................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTGGATTTCCTCGCAGT.................................................19125.008.00-17.00-----7.00------------------------------------------------------------------------------1.00--------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTGGATTTCCTCGCAGTTT...............................................22124.002.00---1.001.00-----3.006.00-------1.00-------------------1.001.00--------------1.00--1.00-------------------1.00--1.00----------1.00--1.001.00------1.00-----1.00----------------1.00----
................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCTCTGGATTTCCTCGCAG..................................................21121.0021.001.00---2.00-1.00--1.00------1.00-1.002.00--2.00---1.00----------------2.00--1.00------------------------------1.00---------1.00--1.00-------1.00--------1.00-----------------1.00-----
................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCTCTGGATTTCCTCGCAGA.................................................2219.009.004.00----------------------------1.00---------------1.00---------------------1.00--------------1.00-------------------------------1.00----------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTGGATTTCCTCGCAG..................................................1818.008.00-----8.00-----------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCTCTGGATTTCCTCGCAGAA................................................2316.009.005.00-----1.00----------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCTCTGGATTTCCTCGCA...................................................2015.005.00---1.00---------------------1.00-------1.00-----------1.00----1.00--------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................................CTCAAGTGGCTCTGGATTCCC........................................................215.000.00--------------------3.00-----------------------2.00--------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCTCTGGATTTCCTCGCAGTAA...............................................2414.0021.00--------------1.00-------------------2.00-1.00----------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCTCTGGATTTCCTCGCAGTA................................................2314.0021.001.00---------------------1.00------------------------------1.00--------------------------1.00--------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGGATGAAGGCGGGATTA.........2014.004.00---4.00-------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTCTGGATTTCCTCGCAGT.................................................214.000.00--------3.00----------------------------------------------------------------------------1.00---------------------------------------------
......................................................................................................ACGGGTGGGTTGTGGCATGGTTCCA........................................................................................................................................................................................................................................................................................................................................................................2514.004.00---------------4.00-------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................TGCGAGGGGGCCCACCGGA.....................................................................................1913.003.00-----------------3.00-----------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCTCTGGATTTCCTCGCAGTT................................................2313.0021.00--------------------------------------------------------1.00-----------------------------------------------------1.00----------1.00---------
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATGAAGGCGGGATTACCTGGAG..2513.003.00---3.00-------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCTCTGGATTTCCTCGCAT..................................................2112.005.00------------2.00----------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................GGACCACACGGCTCAAGTGGCT..................................................................2212.002.00---2.00-------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCTCTGGATTTCCTCGCAGTGA...............................................2412.0021.00--------2.00--------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTGGATTTCCTCGCAG..................................................1912.002.00----2.00------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................CGTGGCGGTGGTGGCGGC........................................................................................................................................................182.000.00---------------------------------1.00----------------------------------1.00--------------------------------------------------------------
.............................................................................................GAAGGTCCCACGGGTGGGTTGTGGCA................................................................................................................................................................................................................................................................................................................................................................................2612.002.00---2.00-------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTGGATTTCCTCGCAGTT................................................2112.002.00----------1.00-----------------------------------------------------------------1.00------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................GGGGCCCACCGGACCCG.................................................................................171.000.00--------------1.00--------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCTGAGATCCCAGGCCCGAGA..........................2311.001.00----------------------------------------------------------------1.00------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................CGGACCACACGGCTCAAGTGGCT..................................................................2311.001.00-------------1.00---------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTGGATTTCCTCGCAGT.................................................2011.002.00-------------------------------------------------------------------------1.00---------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCCCGAGAGGATGAAGGCGGGA............2411.001.00---1.00-------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCTCTGGATTTCCTCGCAGTTAA..............................................2511.0021.00-----------------------------------------------------------------------------------1.00-----------------------------------------------
.......................................................GCAAGGAATGCCTGTGCCA.............................................................................................................................................................................................................................................................................................................................................................................................................................191.000.00---------------------------------------------------------------------------------------------1.00-------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTGGATTTCCTCGCAGCTTT..............................................2211.008.00---------------------------1.00-------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAGGATGAAGGCGGGAT...........1911.001.00------------1.00----------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCGGGATTACCTGCGG..181.000.00------------------------------1.00----------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................CTGAGAGCTAAGTGAAGTC..........................................................................................................................1911.001.00----------------------------------------------------------------------1.00------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAGGATGAAGGCGGGATTACCTG.....2511.001.00-------------1.00---------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................CCCTGCGAGGGGGCCCACCGGA.....................................................................................2211.001.00---------------------------------------------------------------------------------------------------------1.00-------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................GGCTCAAGTGGCTCTGGATTTCCTCGCAGAC................................................3111.001.00-------------1.00---------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCTCTGGATTTCCTCGC....................................................1911.001.00---------------------------------------------------------------------1.00-------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................GGACCACACGGCTCAAGTGGC...................................................................2111.001.00-------------1.00---------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................TGCTGAGAGCTAAGTGAAGTCGTGC......................................................................................................................2511.001.00-------------1.00---------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCTCTGGATTTCCTCGCAGTTT...............................................2411.0021.00------------------------------------------------1.00----------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTGGATTTCCTCGCAGATT...............................................221.000.00--------------------------1.00--------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTGGATTTCCTCGCAGTT................................................2011.008.00---------------------------------------------------------------------------1.00-------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCTCTGGATTTCCTCGCATT.................................................2211.005.001.00----------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................ACCTCCTACACCTGCTTTA........................................................................................................................................191.000.00----1.00------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................CCCTGCGAGGGGGCCCACCGGAA....................................................................................2311.001.00-----------------------1.00-----------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGGATTACCTGGATT.171.000.00-------------------------------------------------1.00---------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCTCTGGATTTCCTCGCAGC.................................................2211.0021.00---------------------------1.00-------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................ACACCTGCTGAGAGCTAAGT................................................................................................................................2011.001.00-------------1.00---------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCTCTGGATTTCCTCGCAGTATT..............................................2511.0021.00---------------------1.00-------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................CGGCTCAAGTGGCTCTGGATTTC.........................................................2311.001.00-----------------------------------------1.00-----------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATGAAGGCGGGATTACC.......2011.001.00---1.00-------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCTCTGGATTTCCTCG.....................................................1811.001.00----1.00------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATGAAGGCGGGATTACCTGGAGCG2711.001.00---1.00-------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAGGCGGGATTACACAG....191.000.00----1.00------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGATCCCAGGCCCGAGAGGATGA....................2511.001.00--------------------------------------------------------------------------------------------------------------------------1.00--------
.......................................................................................................CGGGTGGGTTGTGGCATGGTTC..........................................................................................................................................................................................................................................................................................................................................................................2211.001.00---------------1.00-------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................CGGCCCCAGCAGAGCCC..............................................................................................................................................................................................................................................................................................1720.500.50-----------------------------------------------------0.50-----------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGGATTTCCTCGCAG..................................................1720.500.50------------------------------------------------------0.50----------------------------------------------------------------------------
.............................................................................................GAAGGTCCCACGGGT...........................................................................................................................................................................................................................................................................................................................................................................................1520.500.50--------------------------------------------------------------------------------------------------------------------------------0.50--
....................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGGATTTCCTCGCAGT.................................................1820.500.50-------------------------------------------------------------------------------------------------------------------------------0.50---
................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCAGGCCCGAGAGG........................1590.110.11----------------------------------------------------------------------------------------------------------------------------------0.11

Antisense strand
GCCTCCTGGCTGCGAGGAGGCAGCCAGGGACCAGGTGCCACCCTTCTGAGGTGAGGCAAGGAATGCCTGTCCCTTGGGCACGTCTAACTTGGTGAAGGTCCCACGGGTGGGTTGTGGCATGGTTCCAGCTTGCCGGGTCCGATGTGGGCAGCAGCTCTCTGCCTTGCCCCAAGTTCCTGGTGGGCGGCCCCAGCAGAGCCCGCCGCAGCTTCACTCCCCTGCGTGCCACCTGCCAGTCGGGGGTCCACTGCATCCTAGGTCCTGGGCAAGTCCCCTCCCCTCTTGAAACTTTAGTTTCCTCCCCTGTGAAATGGGGACGTGGCGGTGGTGGCACCTCCTACACCTGCTGAGAGCTAAGTGAAGTCGTGCGTGAGCAGTGCCCCTGCGAGGGGGCCCACCGGACCACACGGCTCAAGTGGCTCTGGATTTCCTCGCAGACACCTGAGATCCCAGGCCCGAGAGGATGAAGGCGGGATTACCTGGAGCG
.......................................................................................................................................................................................................................................................................................................................................................((((..(((((((..((.((((((((....))...((((((....))))))............))))))))..)))))))((....))..))))..................................................
.................................................................................................................................................................................................................................................................................................................................................338................................................................................................437................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR189782SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR343334SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR037935(GSM510473)
293cand3. (cell line)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR189786SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189784SRR029124(GSM416753)
HeLa. (hela)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR037937(GSM510475)
293cand2. (cell line)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR191610(GSM715720)
195genomic small RNA (size selected RNA from . (breast)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR343335SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577745(Rovira)
total RNA. (breast)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR029125(GSM416754)
U2OS. (cell line)
TAX577579(Rovira)
total RNA. (breast)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR037936(GSM510474)
293cand1. (cell line)
SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR040028(GSM532913)
G026N. (cervix)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR343336SRR191407(GSM715517)
81genomic small RNA (size selected RNA from t. (breast)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191588(GSM715698)
52genomic small RNA (size selected RNA from t. (breast)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR038855(GSM458538)
D10. (cell line)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)
SRR029128(GSM416757)
H520. (cell line)
SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
TAX577739(Rovira)
total RNA. (breast)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040039(GSM532924)
G531T. (cervix)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)
SRR191559(GSM715669)
65genomic small RNA (size selected RNA from t. (breast)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR038859(GSM458542)
MM386. (cell line)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
TAX577742(Rovira)
total RNA. (breast)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR037941(GSM510479)
293DroshaTN. (cell line)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
DRR001483(DRX001037)
"Hela long cytoplasmic cell fraction, control. (hela)
SRR191600(GSM715710)
90genomic small RNA (size selected RNA from t. (breast)
GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR029132(GSM416761)
MB-MDA231. (cell line)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR038856(GSM458539)
D11. (cell line)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR189787SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
....................................................................................................CCACGGGTGGGTTGTGGCAAGG............................................................................................................................................................................................................................................................................................................................................................................. 221.000.00---------------------------1.00-------------------------------------------------------------------------------------------------------
...........................................................................................ATGCCACAACCCACCCGTGGGACCTTCAC............................................................................................................................................................................................................................................................................................................................................................................... 2911.001.00------------------------------------------1.00----------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................TGGCGGTGGTGGCACTGGA..................................................................................................................................................... 191.000.00--------------------------------------1.00--------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................ACACGGCTCAAGTGGAGGG................................................................ 191.000.00-----------------------------------------------------------------------------------------1.00-----------------------------------------
...................................................................................................................CGGACCCGGCAAGCTGGAACCATGCC.......................................................................................................................................................................................................................................................................................................................................................... 2611.001.00----------------------------------------------------------------------------------------1.00------------------------------------------
...............................................................................................................TTGTGGCATGGTTCCATCAG.................................................................................................................................................................................................................................................................................................................................................................... 201.000.00------------------------------1.00----------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................CCCGACTGGCAGGTGG...................................................................................................................................................................................................................................................... 1611.001.00--------1.00--------------------------------------------------------------------------------------------------------------------------
.............................................................................CCAAGTTAGACGTGC........................................................................................................................................................................................................................................................................................................................................................................................................... 1511.001.00-------------------------------------1.00---------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATGAAGGCGGGATAAA........ 181.000.00--------------------------------------1.00--------------------------------------------------------------------------------------------
............................AGGGTGGCACCTGGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................... 1640.250.25---------------------------------------------------------------------------------------------------------------------------------0.25-
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATCCTCTCGGGCC.................... 1550.200.20--------------0.20--------------------------------------------------------------------------------------------------------------------