| (12) B-CELL | (1) BREAST | (28) CELL-LINE | (1) CERVIX | (2) FIBROBLAST | (3) HEART | (1) OTHER | (1) RRP40.ip | (4) SKIN |
| GGAAGCTTCTTTTTCTAAACTTACAGCTTTTAGGCCAAAACCATGTGAAGTTTTTCATTAATTCTAAGTGTAAAGTGGTCCTAAAATTGTCTAGAAGTAAGCTGATGATATACTGATGGTATTAGTTTCTGAACCCATCCACTACAGTAAAGGGCTGGTTTCTGCCCATGTGAAGTAATTTCTCTATTTCTCATTTTCAGAGATATGATCATAACAAGAATGATAAGATTCTTCCAATCAGTCTCGAGCC .....................................................................................................((((.....(((((((((..((((...))))..)))))......))))..((((........)))).((.((((((.......)))))).))...)))).................................................. ............................................................................................93.........................................................................................................200................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR029127(GSM416756) A549. (cell line) | SRR037944(GSM510482) 293DcrTN_cand5. (cell line) | SRR033722(GSM497067) KMS12 cell line (KMS12). (B cell) | SRR033724(GSM497069) L428 cell line (L428). (B cell) | SRR033723(GSM497068) L1236 cell line (L1236). (B cell) | SRR363675(GSM830252) cell type: human foreskin fibroblasts (HFF)tr. (fibroblast) | SRR033718(GSM497063) Multiple Myeloma (U266). (B cell) | SRR015447(SRR015447) nuclear small RNAs. (breast) | SRR033711(GSM497056) GCB DLBCL (GCB110). (B cell) | SRR033717(GSM497062) Mentle Cell Lymphoma (MCL112). (B cell) | SRR037943(GSM510481) 293DcrTN. (cell line) | SRR037937(GSM510475) 293cand2. (cell line) | SRR033721(GSM497066) Ly3 cell line (Ly3). (B cell) | SRR039193(GSM494812) HL60 cell line is derived from acute promyelo. (cell line) | SRR038852(GSM458535) QF1160MB. (cell line) | SRR330865(SRX091703) tissue: skin psoriatic involveddisease state:. (skin) | SRR107297(GSM677704) 18-30nt fraction of small RNA. (cell line) | SRR033716(GSM497061) Mentle Cell Lymphoma (MCL114). (B cell) | SRR033732(GSM497077) bjab cell line (bjab103). (B cell) | SRR033715(GSM497060) Mantle Cell Lymphoma (Mino122). (B cell) | SRR033713(GSM497058) Burkitt Lymphoma (BL115). (B cell) | SRR038860(GSM458543) MM426. (cell line) | SRR060168(GSM565978) 5-8F_nucleus. (cell line) | SRR342899(SRX096795) small RNA seq of Left atrial tissue. (heart) | SRR343334 | SRR037942(GSM510480) 293DroshaTN_cand5. (cell line) | SRR060983(GSM569187) Human pre-germinal center B cell [09-001]. (cell line) | DRR000555(DRX000313) "THP-1 whole cell RNA, no treatment". (cell line) | SRR189787 | SRR039190(GSM494809) PBMCs were isolated by ficoll gradient from t. (blood) | SRR207112(GSM721074) RRP40 knockdown. (RRP40 cell line) | SRR330898(SRX091736) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR342901(SRX096797) small RNA seq of Left atrial tissue. (heart) | GSM532874(GSM532874) G699T. (cervix) | SRR343333(GSM796036) KSHV (HHV8). (cell line) | GSM416733(GSM416733) HEK293. (cell line) | SRR189785 | SRR037931(GSM510469) 293GFP. (cell line) | SRR060982(GSM569186) Human centrocyte [09-001]. (cell line) | SRR038854(GSM458537) MM653. (cell line) | SRR037938(GSM510476) 293Red. (cell line) | SRR038859(GSM458542) MM386. (cell line) | SRR390723(GSM850202) total small RNA. (cell line) | SRR037941(GSM510479) 293DroshaTN. (cell line) | SRR330894(SRX091732) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR038863(GSM458546) MM603. (cell line) | SRR033714(GSM497059) Burkitt Lymphoma (BL134). (B cell) | SRR363673(GSM830250) cell type: human foreskin fibroblasts (HFF)tr. (fibroblast) | SRR038853(GSM458536) MELB. (cell line) | SRR342897(SRX096793) small RNA seq of Left atrial tissue. (heart) | SRR038856(GSM458539) D11. (cell line) | SRR038862(GSM458545) MM472. (cell line) | SRR060981(GSM569185) Human centroblast [09-001]. (cell line) | SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR330913(SRX091751) tissue: normal skindisease state: normal. (skin) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .................................................................................................TAAGCTGATGATATACTGATG.................................................................................................................................... | 21 | 1 | 109.00 | 109.00 | 14.00 | 13.00 | 10.00 | 8.00 | 7.00 | 2.00 | 4.00 | 2.00 | 4.00 | 3.00 | 3.00 | 2.00 | - | 2.00 | 3.00 | 2.00 | 2.00 | 2.00 | 2.00 | - | 2.00 | 2.00 | 2.00 | - | - | 1.00 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | 1.00 | - | 1.00 | 1.00 | 1.00 | 1.00 | - | 1.00 | 1.00 | - | 1.00 | 1.00 | 1.00 | 1.00 | - | 1.00 | 1.00 | 1.00 | - | - |
| .................................................................................................TAAGCTGATGATATACTGATGGTATT............................................................................................................................... | 26 | 1 | 3.00 | 3.00 | - | - | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................TAAGCTGATGATATACTGAGG.................................................................................................................................... | 21 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................GTAAGCTGATGATATACTGATG.................................................................................................................................... | 22 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................AAGCTGATGATATACTGATG.................................................................................................................................... | 20 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................TAAGCTGATGATATACTGA...................................................................................................................................... | 19 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................TAAGCTGATGATATACTG....................................................................................................................................... | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................AATTTCTCTATTTCTCCCC....................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................................................................CATCCACTACAGTAAAG.................................................................................................. | 17 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................ATGATCATAACAAGAATG............................ | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .................................................................................................TAAGCTGATGATATACTGTTG.................................................................................................................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................TCTGAACCCATCCACTACTGG...................................................................................................... | 21 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................................................................................................................................................AAGAATGATAAGATTCTTCCAATCA.......... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................TGATAAGATTCTTCCAATCA.......... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................GTAAGCTGATGATATACTGATGGTAAA............................................................................................................................... | 27 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................GTAAGCTGATGATATACTGATGG................................................................................................................................... | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................AATGATAAGATTCTTCCAATCAGTCTCGAGC. | 31 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................GGTATTAGTTTCTGAACTCTG................................................................................................................ | 21 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................................................................................................CAATCAGTCTCGAGCACCA | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....CTTCTTTTTCTAAACTT.................................................................................................................................................................................................................................... | 17 | 7 | 0.29 | 0.29 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.29 | - |
| GGAAGCTTCTTTTTCTAAACTTACAGCTTTTAGGCCAAAACCATGTGAAGTTTTTCATTAATTCTAAGTGTAAAGTGGTCCTAAAATTGTCTAGAAGTAAGCTGATGATATACTGATGGTATTAGTTTCTGAACCCATCCACTACAGTAAAGGGCTGGTTTCTGCCCATGTGAAGTAATTTCTCTATTTCTCATTTTCAGAGATATGATCATAACAAGAATGATAAGATTCTTCCAATCAGTCTCGAGCC .....................................................................................................((((.....(((((((((..((((...))))..)))))......))))..((((........)))).((.((((((.......)))))).))...)))).................................................. ............................................................................................93.........................................................................................................200................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR029127(GSM416756) A549. (cell line) | SRR037944(GSM510482) 293DcrTN_cand5. (cell line) | SRR033722(GSM497067) KMS12 cell line (KMS12). (B cell) | SRR033724(GSM497069) L428 cell line (L428). (B cell) | SRR033723(GSM497068) L1236 cell line (L1236). (B cell) | SRR363675(GSM830252) cell type: human foreskin fibroblasts (HFF)tr. (fibroblast) | SRR033718(GSM497063) Multiple Myeloma (U266). (B cell) | SRR015447(SRR015447) nuclear small RNAs. (breast) | SRR033711(GSM497056) GCB DLBCL (GCB110). (B cell) | SRR033717(GSM497062) Mentle Cell Lymphoma (MCL112). (B cell) | SRR037943(GSM510481) 293DcrTN. (cell line) | SRR037937(GSM510475) 293cand2. (cell line) | SRR033721(GSM497066) Ly3 cell line (Ly3). (B cell) | SRR039193(GSM494812) HL60 cell line is derived from acute promyelo. (cell line) | SRR038852(GSM458535) QF1160MB. (cell line) | SRR330865(SRX091703) tissue: skin psoriatic involveddisease state:. (skin) | SRR107297(GSM677704) 18-30nt fraction of small RNA. (cell line) | SRR033716(GSM497061) Mentle Cell Lymphoma (MCL114). (B cell) | SRR033732(GSM497077) bjab cell line (bjab103). (B cell) | SRR033715(GSM497060) Mantle Cell Lymphoma (Mino122). (B cell) | SRR033713(GSM497058) Burkitt Lymphoma (BL115). (B cell) | SRR038860(GSM458543) MM426. (cell line) | SRR060168(GSM565978) 5-8F_nucleus. (cell line) | SRR342899(SRX096795) small RNA seq of Left atrial tissue. (heart) | SRR343334 | SRR037942(GSM510480) 293DroshaTN_cand5. (cell line) | SRR060983(GSM569187) Human pre-germinal center B cell [09-001]. (cell line) | DRR000555(DRX000313) "THP-1 whole cell RNA, no treatment". (cell line) | SRR189787 | SRR039190(GSM494809) PBMCs were isolated by ficoll gradient from t. (blood) | SRR207112(GSM721074) RRP40 knockdown. (RRP40 cell line) | SRR330898(SRX091736) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR342901(SRX096797) small RNA seq of Left atrial tissue. (heart) | GSM532874(GSM532874) G699T. (cervix) | SRR343333(GSM796036) KSHV (HHV8). (cell line) | GSM416733(GSM416733) HEK293. (cell line) | SRR189785 | SRR037931(GSM510469) 293GFP. (cell line) | SRR060982(GSM569186) Human centrocyte [09-001]. (cell line) | SRR038854(GSM458537) MM653. (cell line) | SRR037938(GSM510476) 293Red. (cell line) | SRR038859(GSM458542) MM386. (cell line) | SRR390723(GSM850202) total small RNA. (cell line) | SRR037941(GSM510479) 293DroshaTN. (cell line) | SRR330894(SRX091732) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR038863(GSM458546) MM603. (cell line) | SRR033714(GSM497059) Burkitt Lymphoma (BL134). (B cell) | SRR363673(GSM830250) cell type: human foreskin fibroblasts (HFF)tr. (fibroblast) | SRR038853(GSM458536) MELB. (cell line) | SRR342897(SRX096793) small RNA seq of Left atrial tissue. (heart) | SRR038856(GSM458539) D11. (cell line) | SRR038862(GSM458545) MM472. (cell line) | SRR060981(GSM569185) Human centroblast [09-001]. (cell line) | SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR330913(SRX091751) tissue: normal skindisease state: normal. (skin) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ......................................................................................................................................................................................................................................GAGACTGATTGGAAG..... | 15 | 5 | 0.20 | 0.20 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.20 |