ID: uc004bin.3_intron_6_0_chr9_117110181_r.3p
GENE: AKNA(6)
chr9:117110131-117110380-


(1)
AGO1.ip 		(1)
AGO2.ip 		(7)
B-CELL 		(1)
BRAIN 		(6)
BREAST 		(12)
CELL-LINE 		(2)
CERVIX 		(2)
HEART 		(1)
HELA 		(7)
LIVER 		(2)
OTHER 		(6)
SKIN 		(3)
UTERUS 		(1)
XRN.ip

Sense strand
GGGACATGAACTCAGAAAGGTGTCAAGTTGTGTAGCAAGAAAAGTGTCGCACAGGAAAGTTCTAGAATCGTTTGACAGCAGAGATAGACCCTGTGCCTGCTGTGAAGGGACAAAGGCTGCCGCATCCTGGCATACTCGGGTGGCTGCAGCTCTGTTCCTCATGCCTCTGTTCTTTGTTTCTGTCTCCACTCCAACCCCAGCCAGGCCATCTGTGAGCTGCAAGAAGAGGTGTCCCGGCTTCGTCTGCGGC
.....................................................................................................(((.(((((((..((((((.((..(((((.....)))))..)).)))))).))))))))))........................................................................................
.................................................................................................98...............................................................163.....................................................................................
SizePerfect hitTotal NormPerfect NormSRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		TAX577741(Rovira)
total RNA. (breast)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		TAX577740(Rovira)
total RNA. (breast)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR040039(GSM532924)
G531T. (cervix)		SRR038854(GSM458537)
MM653. (cell line)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		TAX577579(Rovira)
total RNA. (breast)		SRR038857(GSM458540)
D20. (cell line)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		TAX577743(Rovira)
total RNA. (breast)		SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)		SRR040015(GSM532900)
G623T. (cervix)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
......................................................................................................TGAAGGGACAAAGGCTGCCGCAT.............................................................................................................................23110.0010.00-1.001.00--1.001.001.00--1.00-------------1.00--1.001.00---------1.00----------
........................................................................................................AAGGGACAAAGGCTGCCGCAT.............................................................................................................................2116.006.00--1.00---------------1.001.00------------1.00--------1.00-1.00-----
...............................................................................................CCTGCTGTGAAGGGACAAAGGCTGCA.................................................................................................................................265.000.005.00------------------------------------------------
........................................................................................................AAGGGACAAAGGCTGCCGCATC............................................................................................................................2214.004.00----2.00--------------------------1.00---1.00-------------
........................................................................................................AAGGGACAAAGGCTGCCGCATA............................................................................................................................2212.006.00--------1.00----------------------------1.00-----------
......................................................................................................TGAAGGGACAAAGGCTGCCAAA..............................................................................................................................222.000.00-2.00-----------------------------------------------
......................................................................................................TGAAGGGACAAAGGCTGCCGCAA.............................................................................................................................2312.001.00------2.00------------------------------------------
......................................................................................................TGAAGGGACAAAGGCTGCCGTA..............................................................................................................................222.000.00---2.00---------------------------------------------
........................................................................................................AAGGGACAAAGGCTGCCGCA..............................................................................................................................2012.002.00---1.00---1.00-----------------------------------------
......................................................................................................TGAAGGGACAAAGGCTGCCGCA..............................................................................................................................2211.001.00---------------1.00---------------------------------
............................................................................................................................................TGGCTGCAGCTCTGTTCCT...........................................................................................1911.001.00------------------------------------1.00------------
........................................................................................................AAGGGACAAAGGCTGCCGAAA.............................................................................................................................2121.001.00---------------------1.00---------------------------
.....................................................................................................GTGAAGGGACAAAGGCTGCCGC...............................................................................................................................2211.001.00------------------------------------------1.00------
......................................................................................................................................................................................................................AGCTGCAAGAAGAGGTGTTCC...............211.000.00--------1.00----------------------------------------
......................................................................................................TGAAGGGACAAAGGCTGCCGCATCC...........................................................................................................................2511.001.00--------------------------1.00----------------------
.............................GTGTAGCAAGAAAAGAAAT..........................................................................................................................................................................................................191.000.00------------------------------1.00------------------
.....................................................................................................................................ACTCGGGTGGCTGCAGCTCTGT...............................................................................................2211.001.00------------1.00------------------------------------
.....................................................................................................................................................................................................................................TGTCCCGGCTTCGTCTGCT..191.000.00--------------------------------------------1.00----
.......................................................................................................GAAGGGACAAAGGCTGCCGCATCA...........................................................................................................................241.000.00----1.00--------------------------------------------
....................................................................................................................................................................................................................................GTGTCCCGGCTTCGTCT.....1711.001.00----------------------------------1.00--------------
.......................................................................................................GAAGGGACAAAGGCTGCCGCATCCT..........................................................................................................................2511.001.00----------------1.00--------------------------------
.........................................................................................................................................GGGTGGCTGCAGCTCTGTTCCTCATGC......................................................................................2711.001.00---------------------------------1.00---------------
......................................................................................................TGAAGGGACAAAGGCTGCCGCATCA...........................................................................................................................251.000.00-------------1.00-----------------------------------
.........................................................................................................................................GGGTGGCTGCAGCTCTGTTCCTCTGCC......................................................................................271.000.00----------------------1.00--------------------------
...................................................CAGGAAAGTTCTAGAATCGTTTGACAGC...........................................................................................................................................................................2811.001.00-----------1.00-------------------------------------
........................................................................................................AAGGGACAAAGGCTGCCG................................................................................................................................1821.001.00----------------------------------------1.00--------
..........................................................................................................................................................................................................AGGCCATCTGTGAGCTGCAAG...........................2111.001.00-----------------------------1.00-------------------
..............................................................................................................................CTGGCATACTCGGGTGGCTG........................................................................................................2011.001.00-----------------1.00-------------------------------
.........................................................................................................................................................................................................CAGGCCATCTGTGAGCTGCAAGAAGA.......................2611.001.00---------------------------------------1.00---------
.......................................................................................................GAAGGGACAAAGGCTGCCGCAT.............................................................................................................................2211.001.00-1.00-----------------------------------------------
...................................................................................................................................................................................................................GTGAGCTGCAAGAAGAGGTGTCCCG..............2511.001.00----------1.00--------------------------------------
......................................................................................................TGAAGGGACAAAGGCTGCCCCAT.............................................................................................................................231.000.00--1.00----------------------------------------------
...........................................................................................................................................................................................................GGCCATCTGTGAGCTGCAAGAAGAGG.....................2611.001.00-------------------------1.00-----------------------
......................................................................................................TGAAGGGACAAAGGCTGCCGAT..............................................................................................................................221.000.00--------------------1.00----------------------------
...............................................................................AGAGATAGACCCTGTGCCTG.......................................................................................................................................................2011.001.00----------------------------------------------1.00--
....CATGAACTCAGAAAGGTGT...................................................................................................................................................................................................................................1911.001.00-----------------------1.00-------------------------
...........................TTGTGTAGCAAGAAAAGT.............................................................................................................................................................................................................1811.001.00---------------------------------------------1.00---
.......GAACTCAGAAAGGTGT...................................................................................................................................................................................................................................1630.330.33-----------------------------------------------0.33-
......TGAACTCAGAAAGGTG....................................................................................................................................................................................................................................1640.250.25------------------------------------------------0.25

Antisense strand
GGGACATGAACTCAGAAAGGTGTCAAGTTGTGTAGCAAGAAAAGTGTCGCACAGGAAAGTTCTAGAATCGTTTGACAGCAGAGATAGACCCTGTGCCTGCTGTGAAGGGACAAAGGCTGCCGCATCCTGGCATACTCGGGTGGCTGCAGCTCTGTTCCTCATGCCTCTGTTCTTTGTTTCTGTCTCCACTCCAACCCCAGCCAGGCCATCTGTGAGCTGCAAGAAGAGGTGTCCCGGCTTCGTCTGCGGC
.....................................................................................................(((.(((((((..((((((.((..(((((.....)))))..)).)))))).))))))))))........................................................................................
.................................................................................................98...............................................................163.....................................................................................
SizePerfect hitTotal NormPerfect NormSRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		TAX577741(Rovira)
total RNA. (breast)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		TAX577740(Rovira)
total RNA. (breast)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR040039(GSM532924)
G531T. (cervix)		SRR038854(GSM458537)
MM653. (cell line)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		TAX577579(Rovira)
total RNA. (breast)		SRR038857(GSM458540)
D20. (cell line)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		TAX577743(Rovira)
total RNA. (breast)		SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)		SRR040015(GSM532900)
G623T. (cervix)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
.....................................................................................................................................................................................GTCTCCACTCCAACCCCATCTG............................................... 222.000.00---------2.00---------------------------------------
..........................................................................................CTGTGCCTGCTGTGAACAG............................................................................................................................................. 191.000.00-----1.00-------------------------------------------
................................................................................................................................................................................................AACCCCAGCCAGGCCATGG....................................... 191.000.00--------------1.00----------------------------------
.......................................................................................ACCCTGTGCCTGCTGTGG................................................................................................................................................. 181.000.00-----1.00-------------------------------------------