| (1) BREAST | (7) CELL-LINE | (1) CERVIX | (2) LIVER | (2) OTHER | (3) SKIN | (1) UTERUS | (1) XRN.ip |
| AAGGATTTGCTTTTGCACTCTGCTGTTGCTAGACTGTCTCATCATTTTTCTTTGTATTAATATTTCACAACTCATCACATTCTTATTTTTATTATTTGTTATTATAATGCTTTTTCCCCTTTATTCTTACTATCTCTGTCTTTTAAAAACTTGTTCTCTAACTTTGTTTTCCATTTTCTCTTTTTACTTTTTCCATACAGTGTTGTTACAGATCTTATAACAGTCGGTTTAAAGGTAGGAATCTTTTACT ...................................................(((((.(((((..................................))))).)))))............................................................................................................................................... ..................................................51.............................................................................................................162...................................................................................... | Size | Perfect hit | Total Norm | Perfect Norm | SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189776(GSM714636) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR094131(GSM651907) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR189784 | SRR040037(GSM532922) G243T. (cervix) | SRR330904(SRX091742) tissue: normal skindisease state: normal. (skin) | SRR189785 | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR330874(SRX091712) tissue: skin psoriatic involveddisease state:. (skin) | SRR330860(SRX091698) tissue: skin psoriatic involveddisease state:. (skin) | SRR039622(GSM531985) HCV(+) Adjacent Tissue Sample. (liver) | SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver) | SRR191430(GSM715540) 167genomic small RNA (size selected RNA from . (breast) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ......................................................TATTAATATTTCACAACTCATCACAT.......................................................................................................................................................................... | 26 | 1 | 37.00 | 37.00 | 11.00 | 13.00 | 6.00 | 4.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................ATTAATATTTCACAACTCATCACAT.......................................................................................................................................................................... | 25 | 1 | 24.00 | 24.00 | 8.00 | 7.00 | 4.00 | 5.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................TTAATATTTCACAACTCATCACAT.......................................................................................................................................................................... | 24 | 1 | 4.00 | 4.00 | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................TATTAATATTTCACAACTCATCACAC.......................................................................................................................................................................... | 26 | 3.00 | 0.00 | - | 2.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................TAATATTTCACAACTCATCACAT.......................................................................................................................................................................... | 23 | 1 | 3.00 | 3.00 | 2.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................ATATTTCACAACTCATCACAT.......................................................................................................................................................................... | 21 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................CACAACTCATCACATTCTTATTTTTATTATTTG........................................................................................................................................................ | 33 | 1 | 2.00 | 2.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................TTTCACAACTCATCACAT.......................................................................................................................................................................... | 18 | 1 | 2.00 | 2.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................TATTTCACAACTCATCACAT.......................................................................................................................................................................... | 20 | 1 | 2.00 | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................CGGTTTAAAGGTAGG........... | 15 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| .............................................................................CATTCTTATTTTTATTTTTG......................................................................................................................................................... | 20 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................ATTAATATTTCACAACTCATCACGT.......................................................................................................................................................................... | 25 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................TTAAAAACTTGTTCTCTAACT....................................................................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .......................................................................................................................................................................TTTCCATTTTCTCTTTGTCT............................................................... | 20 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................................................................................................CTCTGTCTTTTAAAAACTTGTTCT............................................................................................. | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ............................................................................................................................................................................ATTTTCTCTTTTTACTTTTTCCATACAG.................................................. | 28 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................AATATTTCACAACTCATCACAT.......................................................................................................................................................................... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................TTAATATTTCACAACTCATCACATTCTTATTTG................................................................................................................................................................. | 33 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................................................................................................................................................................................ATCTTATAACAGTCGGTTTAAAG................ | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ................................................................................................................................................................................TCTCTTTTTACTTTTTTAT....................................................... | 19 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................................TTTCTCTTTTTACTTTTAGGG....................................................... | 21 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | |
| .............................................................ATTTCACAACTCATCACAT.......................................................................................................................................................................... | 19 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................CTTTTTCCCCTTTATTCTTACTATCCCT................................................................................................................. | 28 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................................................................................................TTTCCATTTTCTCTTTTTACTTTTTCCA....................................................... | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................AACTTTGTTTTCCATTGCTT....................................................................... | 20 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................................................................................................................................................TATAACAGTCGGTTTAAAGGTAGGA.......... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................TTCTCTTTTTACTTTTAAAT....................................................... | 20 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................................................................................GTCGGTTTAAAGGTAGGAATCTTAA... | 25 | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................CACATTCTTATTTTTTAAG............................................................................................................................................................ | 19 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................................................................................................................................................................CAGTCGGTTTAAAGGTAGGAATCTTT.... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .............................................................................CATTCTTATTTTTATTATTT......................................................................................................................................................... | 20 | 3 | 0.33 | 0.33 | - | - | - | - | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - |
| AAGGATTTGCTTTTGCACTCTGCTGTTGCTAGACTGTCTCATCATTTTTCTTTGTATTAATATTTCACAACTCATCACATTCTTATTTTTATTATTTGTTATTATAATGCTTTTTCCCCTTTATTCTTACTATCTCTGTCTTTTAAAAACTTGTTCTCTAACTTTGTTTTCCATTTTCTCTTTTTACTTTTTCCATACAGTGTTGTTACAGATCTTATAACAGTCGGTTTAAAGGTAGGAATCTTTTACT ...................................................(((((.(((((..................................))))).)))))............................................................................................................................................... ..................................................51.............................................................................................................162...................................................................................... | Size | Perfect hit | Total Norm | Perfect Norm | SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189776(GSM714636) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR094131(GSM651907) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR189784 | SRR040037(GSM532922) G243T. (cervix) | SRR330904(SRX091742) tissue: normal skindisease state: normal. (skin) | SRR189785 | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR330874(SRX091712) tissue: skin psoriatic involveddisease state:. (skin) | SRR330860(SRX091698) tissue: skin psoriatic involveddisease state:. (skin) | SRR039622(GSM531985) HCV(+) Adjacent Tissue Sample. (liver) | SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver) | SRR191430(GSM715540) 167genomic small RNA (size selected RNA from . (breast) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .............................TAGACTGTCTCATCATTTG.......................................................................................................................................................................................................... | 19 | 2.00 | 0.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................................................................TTTTTCCATACAGTGTATGG........................................... | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | |
| ..........................................................................................................................................................................................................................AACAGTCGGTTTAAATCTA............. | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | |
| ............................................................................................................................................................................................TTTTCCATACAGTGTTGCAAG......................................... | 21 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |