ID: uc004axw.1_intron_2_0_chr9_100675258_r
GENE: C9orf156(4)
chr9:100675208-100675732-


(1)
AGO2.ip
(7)
B-CELL
(1)
BRAIN
(4)
BREAST
(49)
CELL-LINE
(2)
CERVIX
(1)
FIBROBLAST
(1)
HEART
(6)
HELA
(2)
LIVER
(2)
OTHER
(1)
RRP40.ip
(35)
SKIN
(1)
TESTES
(3)
UTERUS
(1)
XRN.ip

Sense strand
TCGTCCCAATGCAATAGGACTGACCCTGGCCAAGCTGGAAAAGGTAGAAGGTAACCCATTTCATTTCTACTTTTACCTTTTTCCTCACCCAAAAAAGCCTTATAAAATAAACAGCATTCACCACTGGCTGTTTATTCAGACGAGTACCAATGATGTTAACTCCTGAGAACCACCAGACATTGAAGAAAATACAATGATTAAAAGAATGTTAGCATTGAAAAATGTTGAAATAAACTCATAGGATGCTCAGAGCTTGTTTATATTATTGCATATATCCAAAACTATTAAATTATTTAGAAATAACACAAATTTCACAATCATTAAATTAGTAACCAAAGTTTCTCTGACTTGGAATGCAGTAAATACAAAATGATTAAAAATAAATGGACACTTTCCAATTTAACACACAATAACTCATTGTACATGCACATATGGAAAACACATAGACTGGTGGTATATCATTCCTTCCTTGCAGCCTTGGGGAAATGGACAGATATCATGGCTGCAGTGCTGATGTCAACTGTG
...................................................................(((((....((((((.........))))))........((((((((((...........)))))))))).....)))))...........................................................................................................................................................................................................................................................................................................................................................................................
..................................................51.................................................................................................150.....................................................................................................................................................................................................................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormDRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR037937(GSM510475)
293cand2. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR037941(GSM510479)
293DroshaTN. (cell line)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR037935(GSM510473)
293cand3. (cell line)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR029125(GSM416754)
U2OS. (cell line)
SRR037938(GSM510476)
293Red. (cell line)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR037936(GSM510474)
293cand1. (cell line)
SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR553576(SRX182782)
source: Testis. (testes)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR029129(GSM416758)
SW480. (cell line)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR037931(GSM510469)
293GFP. (cell line)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
GSM416733(GSM416733)
HEK293. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038862(GSM458545)
MM472. (cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037933(GSM510471)
293cand4_rep2. (cell line)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR029124(GSM416753)
HeLa. (hela)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR038855(GSM458538)
D10. (cell line)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR038861(GSM458544)
MM466. (cell line)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029130(GSM416759)
DLD2. (cell line)
SRR038863(GSM458546)
MM603. (cell line)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR343337SRR038852(GSM458535)
QF1160MB. (cell line)
SRR191451(GSM715561)
177genomic small RNA (size selected RNA from . (breast)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189784SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)
SRR343336SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
GSM359207(GSM359207)
HepG2_tot_up. (cell line)
SRR189782SRR189785SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR038859(GSM458542)
MM386. (cell line)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
GSM359205(GSM359205)
HepG2_nucl_up. (cell line)
SRR191595(GSM715705)
72genomic small RNA (size selected RNA from t. (breast)
DRR001483(DRX001037)
"Hela long cytoplasmic cell fraction, control. (hela)
SRR038860(GSM458543)
MM426. (cell line)
SRR038857(GSM458540)
D20. (cell line)
GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
GSM359191(GSM359191)
HepG2_3pM_5. (cell line)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR038853(GSM458536)
MELB. (cell line)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)
SRR040035(GSM532920)
G001T. (cervix)
SRR191615(GSM715725)
94genomic small RNA (size selected RNA from t. (breast)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
GSM359190(GSM359190)
HepG2_3pM_4. (cell line)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR040008(GSM532893)
G727N. (cervix)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
................................................................................................................................................TACCAATGATGTTAACTCCTGAGA.....................................................................................................................................................................................................................................................................................................................................................................241378.00378.0085.0057.0029.0028.0014.0012.00-15.0011.00-8.0010.008.004.00--3.006.004.002.00-3.003.005.004.002.002.002.004.001.00-3.002.001.00-3.00-1.001.002.002.001.00---1.002.002.001.001.00-2.002.002.00-2.00-1.002.00-1.00-1.00-1.001.00-1.001.00--1.001.001.001.00------1.001.00----1.00------1.001.001.001.001.00--------1.001.00---1.00-1.00----
.................................................................................................................................................ACCAATGATGTTAACTCCTGAGA.....................................................................................................................................................................................................................................................................................................................................................................231101.00101.0021.0012.0018.0015.00-4.00--3.001.002.00---2.00-2.00-1.002.00-1.001.00-1.00--1.00-----1.00--1.00----1.00-2.001.00---1.00----------1.00--1.00------------------------------------1.001.00---1.001.00----1.00--------
................................................................................................................................................TACCAATGATGTTAACTCCTGAGAA....................................................................................................................................................................................................................................................................................................................................................................25117.0017.00----4.00-----------1.00---------2.00--1.00--1.00---2.00--1.00--1.00-------1.00-----------------------------1.00----------1.00---------1.00-----------------
................................................................................................................................................TACCAATGATGTTAACTCCTG........................................................................................................................................................................................................................................................................................................................................................................21116.0016.00--1.00---8.00--7.00-------------------------------------------------------------------------------------------------------------
................................................................................................................................................TACCAATGATGTTAACTCCTGAG......................................................................................................................................................................................................................................................................................................................................................................23111.0011.002.003.003.00-------1.00--------------------------------------------------------------------------------------------1.00---------1.00-----
................................................................................................................................................TACCAATGATGTTAACT............................................................................................................................................................................................................................................................................................................................................................................1719.009.00---------------6.00--------------1.00-----------------------1.00------------------------1.00---------------------------------------
.................................................................................................................................................ACCAATGATGTTAACTCCTG........................................................................................................................................................................................................................................................................................................................................................................2017.007.00------4.00--3.00-------------------------------------------------------------------------------------------------------------
................................................................................................................................................TACCAATGATGTTAACTCCTGAGAAC...................................................................................................................................................................................................................................................................................................................................................................2617.007.00------------------------------1.00-------------1.001.00---1.00---------1.00----------------1.00------------1.00-----------------------------
.........TGCAATAGGACTGACCCTGGCCAAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2615.005.00--------------------5.00--------------------------------------------------------------------------------------------------
..................................................................................................................................................CCAATGATGTTAACTCCTGAGA.....................................................................................................................................................................................................................................................................................................................................................................2215.005.001.00------------3.00---------------------------------------------------------------------1.00-----------------------------------
................................................................................................................................................TACCAATGATGTTAACTCCTGAGAACC..................................................................................................................................................................................................................................................................................................................................................................2715.005.00----1.00------------------------2.00-------1.00----1.00----------------------------------------------------------------------------
.................................................................................................................................................ACCAATGATGTTAACTCCTGAGAA....................................................................................................................................................................................................................................................................................................................................................................2414.004.00----------------------1.00-------------------------------1.00-----------------------------------1.00-1.00--------------------------
................................................................................................................................................TACCAATGATGTTAACTCCTGAGAAA...................................................................................................................................................................................................................................................................................................................................................................2614.0017.00-------------------2.00-----2.00---------------------------------------------------------------------------------------------
................................................................................................................................................TACCAATGATGTTAACTC...........................................................................................................................................................................................................................................................................................................................................................................1814.004.00-2.00-------------------------1.00-----1.00-------------------------------------------------------------------------------------
.................................................................................................................................................ACCAATGATGTTAACTCCTGA.......................................................................................................................................................................................................................................................................................................................................................................2113.003.00------1.00--2.00-------------------------------------------------------------------------------------------------------------
......................................................................................................................................................TGATGTTAACTCCTGAGA.....................................................................................................................................................................................................................................................................................................................................................................1813.003.00---------------------2.00------------------1.00------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................GGAATGCAGTAAATATTC.............................................................................................................................................................183.000.00-------------------------------------------------------------2.00-------------1.00-------------------------------------------
.................................................................................................................................................ACCAATGATGTTAACTCCTGAG......................................................................................................................................................................................................................................................................................................................................................................2212.002.00----2.00------------------------------------------------------------------------------------------------------------------
................................................................................................................................................TACCAATGATGTTAACTCCTGA.......................................................................................................................................................................................................................................................................................................................................................................2212.002.00--2.00--------------------------------------------------------------------------------------------------------------------
...................................TGGAAAAGGTAGAAGGTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................182.000.00--------------2.00--------------------------------------------------------------------------------------------------------
................................................................................................................................................TACCAATGATGTTAACTCCTGATA.....................................................................................................................................................................................................................................................................................................................................................................2411.002.00------------1.00----------------------------------------------------------------------------------------------------------
.................................................................................................................................................ACCAATGATGTTAACTCCTGAGAACC..................................................................................................................................................................................................................................................................................................................................................................2611.001.00--------------------------------------1.00--------------------------------------------------------------------------------
....................................................................ACTTTTACCTTTTTCCTCACCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001.00------------------------------------------------------------------------------------------------------1.00----------------
..........GCAATAGGACTGACCCTGGCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001.00------------------------------------------------------------1.00----------------------------------------------------------
...............AGGACTGACCCTGGCCAAGCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001.00----------------------------------------------------------------------------------------------------------1.00------------
..................................................................................................................................................CCAATGATGTTAACTCCTGAG......................................................................................................................................................................................................................................................................................................................................................................2111.001.00---------------------------------------------------------------------------------------------1.00-------------------------
..............TAGGACTGACCCTGGCCAAGCCGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................241.000.00----------------------------------1.00------------------------------------------------------------------------------------
................................................................................................................................................TACCAATGATGTTAACTCCTTAGA.....................................................................................................................................................................................................................................................................................................................................................................241.000.00-1.00---------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................AAGTTTCTCTGACTTGGCTGT.........................................................................................................................................................................211.000.00------------------------------1.00----------------------------------------------------------------------------------------
........ATGCAATAGGACTGACCCTGGCCCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................261.000.00--------------------------------------------------------1.00--------------------------------------------------------------
........................................................................................................................................................................ACCACCAGACATTGAATG...................................................................................................................................................................................................................................................................................................................................................181.000.00------------------------------------------------------------------------------------1.00----------------------------------
...................................TGGAAAAGGTAGAAGTCTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................191.000.00-------------------------1.00---------------------------------------------------------------------------------------------
.................................................................................................................................................ACCAATGATGTTAACTCCTGCGA.....................................................................................................................................................................................................................................................................................................................................................................2311.007.00--1.00--------------------------------------------------------------------------------------------------------------------
................................................................................................................................................TACCAATGATGTTAACTCCTGAGC.....................................................................................................................................................................................................................................................................................................................................................................2411.0011.00-------------1.00---------------------------------------------------------------------------------------------------------
...............AGGACTGACCCTGGCCAAGCTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001.00-----------------------------------------------------------------------------1.00-----------------------------------------
................................................................................................................................................TACCAATGATGTTAACTG...........................................................................................................................................................................................................................................................................................................................................................................1811.009.00------1.00----------------------------------------------------------------------------------------------------------------
..................................CTGGAAAAGGTAGAAGGTAACC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001.00---------------------------------------------------------------------1.00-------------------------------------------------
...................................................................................................................................................................................................................................AAATAAACTCATAGGATGCTCAGA..................................................................................................................................................................................................................................................................................2411.001.00--------------------------------------1.00--------------------------------------------------------------------------------
.............ATAGGACTGACCCTGGCCAAGCCGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................251.000.00----------------------------------1.00------------------------------------------------------------------------------------
......................ACCCTGGCCAAGCTGGAAAAGGTAGAAGGTGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................321.000.00---------------------------------------------------------1.00-------------------------------------------------------------
................................................................................................................AGCATTCACCACTGGCTGTTTATTCAGAC................................................................................................................................................................................................................................................................................................................................................................................................2911.001.00----------------------------------------------------------------------1.00------------------------------------------------
.....................................................................................................................................................................................................................................ATAAACTCATAGGATGCTCAGAGCTTGT............................................................................................................................................................................................................................................................................2811.001.00------------------------------------------------------------------------------1.00----------------------------------------
.................................................................................................................................................ACCAATGATGTTAACTCCTGAGC.....................................................................................................................................................................................................................................................................................................................................................................2311.002.001.00----------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................TTTCCAATTTAACACACAATAACTCATTG.........................................................................................................2911.001.00--------------------------------------------------1.00--------------------------------------------------------------------
.............ATAGGACTGACCCTGGCCAAGCTGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001.00----------------------------------1.00------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGGGAAATGGACAGATATCATGGC......................2611.001.00--------------------1.00--------------------------------------------------------------------------------------------------
................................................................................................................................................TACCAATGATGTTAACTCCTGGGA.....................................................................................................................................................................................................................................................................................................................................................................2411.0016.00-1.00---------------------------------------------------------------------------------------------------------------------
................................................................................................................................................TACCAATGATGTTAACTCCTGAAA.....................................................................................................................................................................................................................................................................................................................................................................2411.002.00-------------------------------------1.00---------------------------------------------------------------------------------
...............AGGACTGACCCTGGCCAAGCCGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................231.000.00----------------------------------------------------------------------------------------1.00------------------------------
................................................................................................................................................TACCAATGATGTTAACTCCTT........................................................................................................................................................................................................................................................................................................................................................................211.000.00------1.00----------------------------------------------------------------------------------------------------------------
............AATAGGACTGACCCTGGCCAAGCTGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001.00---------------------------------------------------------------------------------------------------------------1.00-------
..............................................................................................................................................AGTACCAATGATGTTAACTCCTGAGAAC...................................................................................................................................................................................................................................................................................................................................................................2811.001.00--------------------------------------------------------1.00--------------------------------------------------------------
..................................CTGGAAAAGGTAGAAGGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001.00--------------1.00--------------------------------------------------------------------------------------------------------
.................................................................................................................................................ACCAATGATGTTAACTCCGGAG......................................................................................................................................................................................................................................................................................................................................................................221.000.00----1.00------------------------------------------------------------------------------------------------------------------
......CAATGCAATAGGACTGACC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001.00------------------------------------------------------------------1.00----------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCTTGGGGAAATGGACA.................................1820.500.50--------------------------------------------------------------------------------------------------------------------0.50--
...............AGGACTGACCCTGGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1560.330.33---------------------------------------------------------------------------------------------------------------------0.170.17

Antisense strand
TCGTCCCAATGCAATAGGACTGACCCTGGCCAAGCTGGAAAAGGTAGAAGGTAACCCATTTCATTTCTACTTTTACCTTTTTCCTCACCCAAAAAAGCCTTATAAAATAAACAGCATTCACCACTGGCTGTTTATTCAGACGAGTACCAATGATGTTAACTCCTGAGAACCACCAGACATTGAAGAAAATACAATGATTAAAAGAATGTTAGCATTGAAAAATGTTGAAATAAACTCATAGGATGCTCAGAGCTTGTTTATATTATTGCATATATCCAAAACTATTAAATTATTTAGAAATAACACAAATTTCACAATCATTAAATTAGTAACCAAAGTTTCTCTGACTTGGAATGCAGTAAATACAAAATGATTAAAAATAAATGGACACTTTCCAATTTAACACACAATAACTCATTGTACATGCACATATGGAAAACACATAGACTGGTGGTATATCATTCCTTCCTTGCAGCCTTGGGGAAATGGACAGATATCATGGCTGCAGTGCTGATGTCAACTGTG
...................................................................(((((....((((((.........))))))........((((((((((...........)))))))))).....)))))...........................................................................................................................................................................................................................................................................................................................................................................................
..................................................51.................................................................................................150.....................................................................................................................................................................................................................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormDRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR037937(GSM510475)
293cand2. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR037941(GSM510479)
293DroshaTN. (cell line)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR037935(GSM510473)
293cand3. (cell line)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR029125(GSM416754)
U2OS. (cell line)
SRR037938(GSM510476)
293Red. (cell line)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR037936(GSM510474)
293cand1. (cell line)
SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR553576(SRX182782)
source: Testis. (testes)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR029129(GSM416758)
SW480. (cell line)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR037931(GSM510469)
293GFP. (cell line)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
GSM416733(GSM416733)
HEK293. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038862(GSM458545)
MM472. (cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037933(GSM510471)
293cand4_rep2. (cell line)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR029124(GSM416753)
HeLa. (hela)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR038855(GSM458538)
D10. (cell line)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR038861(GSM458544)
MM466. (cell line)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029130(GSM416759)
DLD2. (cell line)
SRR038863(GSM458546)
MM603. (cell line)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR343337SRR038852(GSM458535)
QF1160MB. (cell line)
SRR191451(GSM715561)
177genomic small RNA (size selected RNA from . (breast)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189784SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)
SRR343336SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
GSM359207(GSM359207)
HepG2_tot_up. (cell line)
SRR189782SRR189785SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR038859(GSM458542)
MM386. (cell line)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
GSM359205(GSM359205)
HepG2_nucl_up. (cell line)
SRR191595(GSM715705)
72genomic small RNA (size selected RNA from t. (breast)
DRR001483(DRX001037)
"Hela long cytoplasmic cell fraction, control. (hela)
SRR038860(GSM458543)
MM426. (cell line)
SRR038857(GSM458540)
D20. (cell line)
GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
GSM359191(GSM359191)
HepG2_3pM_5. (cell line)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR038853(GSM458536)
MELB. (cell line)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)
SRR040035(GSM532920)
G001T. (cervix)
SRR191615(GSM715725)
94genomic small RNA (size selected RNA from t. (breast)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
GSM359190(GSM359190)
HepG2_3pM_4. (cell line)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR040008(GSM532893)
G727N. (cervix)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
.................................GCTGGAAAAGGTAGAAGGCCGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 221.000.00-1.00---------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................................................................AGACTGGTGGTATATGAT............................................................... 181.000.00-------------------------------------------------------------------------------------------------------------------1.00---
..............................................................................................................................................................................................................................................................TGTTTATATTATTGCAGT............................................................................................................................................................................................................................................................. 181.000.00-------------------------------------------------------------------------------------1.00---------------------------------
........................................................................TTACCTTTTTCCTCACTT................................................................................................................................................................................................................................................................................................................................................................................................................................................... 181.000.00--------------1.00--------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................TTATTGCATATATCCAAAAG................................................................................................................................................................................................................................................... 201.000.00------------------1.00----------------------------------------------------------------------------------------------------
........................................................................TTACCTTTTTCCTCACTTA.................................................................................................................................................................................................................................................................................................................................................................................................................................................. 191.000.00--------------1.00--------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................TTATTGCATATATCCAAAAGTA................................................................................................................................................................................................................................................. 221.000.00---------------------------------------------------------------1.00-------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................ACCAAAGTTTCTCTGGGA................................................................................................................................................................................ 181.000.00--------------------------------------------------------------------------------------1.00--------------------------------
..........................................................................ACCTTTTTCCTCACCGCCT................................................................................................................................................................................................................................................................................................................................................................................................................................................ 191.000.00-------------------------------------------------------------------------------------------------------------1.00---------