ID: uc004avh.2_intron_13_0_chr9_98011652_r.3p
GENE: (1)
chr9:98011602-98011851-


(1)
B-CELL
(1)
BRAIN
(3)
BREAST
(7)
CELL-LINE
(1)
HELA
(1)
OTHER
(1)
SKIN

Sense strand
AGTATCATGATAAAAAGTTCAGATGGTAAAAATTGGAGCTCCAGCTGGATGACATATTTTATAACAATTCAAAGATGGCTCCAGCATAGAAGCCATGCTATTTTAGTTCTTTGTAATCCCTCCTTCACCCATCAATGGGTCGTGAAGGCACTGATAAAAGAGCCTTTTAGAAATGCTTCTATTTGTTCCCTTTCTTACAGATTTAATGTGTGCCGACCATTTCCTTCAGTGCTGGACAGGCTGCTGTGAA
........................................................................................................................................(((....((((((.((......)).))))))(((((....)))))......)))............................................................
................................................................................................................................129....................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR189784SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR189782SRR029128(GSM416757)
H520. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577745(Rovira)
total RNA. (breast)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
.....................................................................................................................................AATGGGTCGTGAAGGATC...................................................................................................184119.000.75119.00----------------
.....................................................................................................................................AATGGGTCGTGAAGGAATC..................................................................................................19419.000.7519.00----------------
.....................................................................................................................................AATGGGTCGTGAAGGACA...................................................................................................1847.000.75-4.001.00----1.00---1.00-----
.....................................................................................................................................AATGGGTCGTGAAGGACAA..................................................................................................1943.000.75--2.00---------1.00----
.........................................CAGCTGGATGACATAGTGG..............................................................................................................................................................................................191.000.00---------1.00-------
.....................................................................................................................................AATGGGTCGTGAAGGAAAA..................................................................................................1941.000.75--1.00--------------
......................................................................................................................................ATGGGTCGTGAAGGCCA...................................................................................................171.000.00----------1.00------
..................................................................................................................................................................................CTATTTGTTCCCTTTCACCC....................................................201.000.00-----1.00-----------
................................TTGGAGCTCCAGCTGGATGACATATTTTATA...........................................................................................................................................................................................3111.001.00---1.00-------------
.....................................................................CAAAGATGGCTCCAGTGG...................................................................................................................................................................181.000.00------1.00----------
.....................................................................................................................................AATGGGTCGTGAAGG......................................................................................................1540.750.75---------------0.75-
.....................................................................................................................................................................................................................................TGCTGGACAGGCTGCTG....1720.500.50----------------0.50

Antisense strand
AGTATCATGATAAAAAGTTCAGATGGTAAAAATTGGAGCTCCAGCTGGATGACATATTTTATAACAATTCAAAGATGGCTCCAGCATAGAAGCCATGCTATTTTAGTTCTTTGTAATCCCTCCTTCACCCATCAATGGGTCGTGAAGGCACTGATAAAAGAGCCTTTTAGAAATGCTTCTATTTGTTCCCTTTCTTACAGATTTAATGTGTGCCGACCATTTCCTTCAGTGCTGGACAGGCTGCTGTGAA
........................................................................................................................................(((....((((((.((......)).))))))(((((....)))))......)))............................................................
................................................................................................................................129....................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR189784SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR189782SRR029128(GSM416757)
H520. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577745(Rovira)
total RNA. (breast)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
...............................................GATGACATATTTTATAAT......................................................................................................................................................................................... 181.000.00----1.00------------
...........................................................................................................................................................................................CCCTTTCTTACAGATTCCC............................................ 191.000.00--------------1.00--
...................................................................................................................................................................................................................................AGTGCTGGACAGGCTGCTC.... 191.000.00-------------1.00---
......................................................................................................................CCTCCTTCACCCATCACTCC................................................................................................................ 201.000.00--------1.00--------