ID: uc004ari.1_intron_0_0_chr9_94325612_r.3p
GENE: ROR2(12)
chr9:94325562-94325811-


(2)
B-CELL
(2)
BRAIN
(1)
BREAST
(14)
CELL-LINE
(1)
CERVIX
(3)
HEART
(1)
HELA
(3)
LIVER
(3)
OTHER
(6)
SKIN
(1)
TESTES
(1)
UTERUS

Sense strand
GCCTCCCAGGTACTTGGAACCACAGGCACATTTTAAAATTTTTTGTAGAGACAGGATCTTGCTATGTTGCCCAGGCTGGTCTTGAACTCCTAACCTCAAGCAATCCACCTGCCTAGGTCTCCCAAAGTGCTAGGATTACAGATGTGAATGACTGCACCCATCCATGCTTATTTTTTAAAATTTATTTTTTTCTCTACTAGATTCAGCATTCCCATATTTGAAATGGGAAGAAGTTTCATGTCCATTCTGG
...................................................(((((((..(((.((.....))))).)))))))......................................................................................................................................................................
..................................................51................................................101...................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR189784DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR189787DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191600(GSM715710)
90genomic small RNA (size selected RNA from t. (breast)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR040018(GSM532903)
G701N. (cervix)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
GSM956925PAZD5SRR189782SRR038854(GSM458537)
MM653. (cell line)
SRR553576(SRX182782)
source: Testis. (testes)
SRR189786GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
...................................................CAGGATCTTGCTATGTTGCCTT.................................................................................................................................................................................228.000.00----3.002.00--------------1.00--------1.00--1.00----------
...................................................CAGGATCTTGCTATGTTGCCTTT................................................................................................................................................................................235.000.00-----------2.00-------1.00--------------1.00-1.00------
.......................................................................................................................................................................TTATTTTTTAAAATTTATTTTTTTTTG........................................................275.000.00-2.00-3.00---------------------------------------
...................................................CAGGATCTTGCTATGTTGCCTAT................................................................................................................................................................................233.000.00-------------2.00--------------------------1.00--
...........................................................................CTGGTCTTGAACTCCTAACTCTG........................................................................................................................................................232.000.00----------1.00-1.00------------------------------
........................................................................................................................................................................TATTTTTTAAAATTTATTTTTTTTTG........................................................262.000.00-2.00-----------------------------------------
..............................................AGAGACAGGATCTTGCTTTCC.......................................................................................................................................................................................212.000.00--2.00----------------------------------------
..............................................................................GTCTTGAACTCCTAACTCTG........................................................................................................................................................202.000.00------------------1.00------1.00-----------------
...................................................CAGGATCTTGCTATGTTGCCT..................................................................................................................................................................................212.000.00-------1.00-1.00---------------------------------
...........................................................................................................................................................................TTTTTAAAATTTATTTTTTTTCAG.......................................................242.000.00-1.00---------------------------------------1.00-
....CCCAGGTACTTGGAACTCTG..................................................................................................................................................................................................................................201.000.00-----------------------------------1.00-------
...........................................................................................................................................................................TTTTTAAAATTTATTTTTTTCTTCAG.....................................................261.000.00--------------1.00----------------------------
........................................................................AGGCTGGTCTTGAACTCCTAAGCTC.........................................................................................................................................................251.000.00--------------------------1.00----------------
.........................................................................GGCTGGTCTTGAACTCCTAACTA..........................................................................................................................................................231.000.00------------------------1.00------------------
.......................................................................................................................................................................TTATTTTTTAAAATTTATTTTTTATT.........................................................261.000.00-1.00-----------------------------------------
......................................................................................................................................................................CTTATTTTTTAAAATTTATTTTTTTTTG........................................................281.000.00-1.00-----------------------------------------
.....................................................GGATCTTGCTATGTTAAA...................................................................................................................................................................................181.000.00----------------------1.00--------------------
.......................................................................................................................................................................TTATTTTTTAAAATTTATTTTTTTTTTG.......................................................281.000.00---1.00---------------------------------------
......................................................................................................................................................ACTGCACCCATCCATCTG..................................................................................181.000.00------1.00------------------------------------
.........................................................................................................................................................................ATTTTTTAAAATTTATTTCAC............................................................211.000.00---------------1.00---------------------------
..........................................................TTGCTATGTTGCCCAGGGGAC...........................................................................................................................................................................211.000.001.00------------------------------------------
....................................................................................AACTCCTAACCTCAAGCAATC.................................................................................................................................................2101.001.00---------------------------1.00---------------
.....................................................................................................................................................................................TTATTTTTTTCTCTACTACCTG...............................................221.000.00--------------------------------------1.00----
.....................................................................................ACTCCTAACCTCAAGGTCG..................................................................................................................................................191.000.00------1.00------------------------------------
..........................................TTGTAGAGACAGGATCTTGCTGCA........................................................................................................................................................................................241.000.00--1.00----------------------------------------
.....................................ATTTTTTGTAGAGACAGGATCTTGCCATT........................................................................................................................................................................................291.000.00--1.00----------------------------------------
...............................................................ATGTTGCCCAGGCTGGTCTTGAACTCCGGAC............................................................................................................................................................311.000.001.00------------------------------------------
...............................................................................TCTTGAACTCCTAACTCTG........................................................................................................................................................191.000.00-------------------------------------1.00-----
............................................................................TGGTCTTGAACTCCTAACCTCAAGAGGT..................................................................................................................................................281.000.00------------1.00------------------------------
................................................................................................................................GCTAGGATTACAGATGTCAA......................................................................................................201.000.00---------------------------------1.00---------
..................................AAAATTTTTTGTAGAGACAGGTCCC...............................................................................................................................................................................................251.000.00--1.00----------------------------------------
............................................................................TGGTCTTGAACTCCTAACTCTG........................................................................................................................................................221.000.00----------1.00--------------------------------
...........................................................................CTGGTCTTGAACTCCTAAGC...........................................................................................................................................................201.000.00-------1.00-----------------------------------
................................................AGACAGGATCTTGCTATGTTGCCCAGGCCG............................................................................................................................................................................301.000.00---------------1.00---------------------------
...........................................................................................................................................................................TTTTTAAAATTTATTTTTTTCTCCAG.....................................................261.000.00--------------1.00----------------------------
.........................................................................................................................................................................................................................TTGAAATGGGAAGAATATT..............191.000.00----------------1.00--------------------------
.................................................................................................................................................................................................................TCCCATATTTGAAATG.........................1650.200.20------------------------------------------0.20

Antisense strand
GCCTCCCAGGTACTTGGAACCACAGGCACATTTTAAAATTTTTTGTAGAGACAGGATCTTGCTATGTTGCCCAGGCTGGTCTTGAACTCCTAACCTCAAGCAATCCACCTGCCTAGGTCTCCCAAAGTGCTAGGATTACAGATGTGAATGACTGCACCCATCCATGCTTATTTTTTAAAATTTATTTTTTTCTCTACTAGATTCAGCATTCCCATATTTGAAATGGGAAGAAGTTTCATGTCCATTCTGG
...................................................(((((((..(((.((.....))))).)))))))......................................................................................................................................................................
..................................................51................................................101...................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR189784DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR189787DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191600(GSM715710)
90genomic small RNA (size selected RNA from t. (breast)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR040018(GSM532903)
G701N. (cervix)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
GSM956925PAZD5SRR189782SRR038854(GSM458537)
MM653. (cell line)
SRR553576(SRX182782)
source: Testis. (testes)
SRR189786GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
.........................................................................GGCTGGTCTTGAACTCCTAACCTGGCC...................................................................................................................................................... 272.000.002.00------------------------------------------
...............................................GAGACAGGATCTTGCTATGTTGCCCAGGCCC............................................................................................................................................................................ 311.000.00-------------------------------1.00-----------
.........................................................................................CTAACCTCAAGCAATCCATAGT........................................................................................................................................... 221.000.00---------------------1.00---------------------
................................................CTGGGCAACATAGCAAGATCCTGTCT................................................................................................................................................................................ 2601.001.00---------1.00---------------------------------
......................................................................................................................................................................................................................................AAGTTTCATGTCCATTTG.. 181.000.00-----------------1.00-------------------------
......................CAGGCACATTTTAAAAATAT................................................................................................................................................................................................................ 201.000.00--------1.00----------------------------------
........................................................................................................................................................................................................ATTCAGCATTCCCATATCTG.............................. 201.000.00---------------------------------------1.00---
...................................................CAGGATCTTGCTATGTTGCCCAGGCTGGTCCCC...................................................................................................................................................................... 331.000.001.00------------------------------------------
................................................................TGTTGCCCAGGCTGGTCTTGAACTCCTAGTG........................................................................................................................................................... 311.000.00--1.00----------------------------------------
....................CACAGGCACATTTTACAGG................................................................................................................................................................................................................... 191.000.00--------1.00----------------------------------
.......................................................................CAGGCTGGTCTTGAACTCCTATAGT.......................................................................................................................................................... 251.000.00------------------------------1.00------------
.............................................................................................CCTCAAGCAATCCACCTCCAG........................................................................................................................................ 211.000.00-----------------------1.00-------------------
.........................................................................GGCTGGTCTTGAACTCCTAACCTCAAACC.................................................................................................................................................... 291.000.001.00------------------------------------------
...................................................CAGGATCTTGCTATGTTGCCCAGGCTGGTCCTA...................................................................................................................................................................... 331.000.001.00------------------------------------------
.........................................................................GGCTGGTCTTGAACTCCTAAGGCC......................................................................................................................................................... 241.000.001.00------------------------------------------
..........................................................................................................................................................................TTTTTTAAAATTTATTTCACG........................................................... 211.000.00----------------------------1.00--------------