ID: uc004aqq.2_intron_1_0_chr9_92220449_f
GENE: (2)
chr9:92220399-92220631+


(3)
B-CELL 		(8)
BREAST 		(8)
CELL-LINE 		(6)
CERVIX 		(1)
FIBROBLAST 		(5)
HEART 		(3)
LIVER 		(1)
OTHER 		(14)
SKIN

Sense strand
CAGGGCTGCCTCACTGCCGGCGTCTACGAGTCAGCCAAAGTCTTGAACGTGTAAGTGTAGACGCGGCCCAGGCTGGGAGACAGGGGCGGGGGTGAATGGCGAGGAGACTGGCGGATGGGAGGGGTGGCGGCGGGAGAACTCGGCTAGCCGGTTCTGACCTAGGTCCCCGCCTTGCCCTCGCAGGGACCCCGACAATGTGACCTTCTGTGTGCTGGCTGCGGGTGAGGAGGACG
........................................................................................................................(((((((.((((((.((((.(((....))))))).(((....)))))))))))))))).......................................................
.......................................................................................................................120............................................................183................................................
SizePerfect hitTotal NormPerfect NormSRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		GSM532887(GSM532887)
G761N. (cervix)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)		SRR040016(GSM532901)
G645N. (cervix)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		TAX577579(Rovira)
total RNA. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		TAX577738(Rovira)
total RNA. (breast)		SRR444054(SRX128902)
Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR189784SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR040011(GSM532896)
G529T. (cervix)		SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)		SRR191566(GSM715676)
94genomic small RNA (size selected RNA from t. (breast)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040036(GSM532921)
G243N. (cervix)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR037937(GSM510475)
293cand2. (cell line)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR040031(GSM532916)
G013T. (cervix)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		TAX577739(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM339994(GSM339994)
hues6. (cell line)		SRR191594(GSM715704)
70genomic small RNA (size selected RNA from t. (breast)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR015365(GSM380330)
Memory B cells (MM139). (B cell)		SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		GSM532879(GSM532879)
G659N. (cervix)		TAX577745(Rovira)
total RNA. (breast)		GSM541797(GSM541797)
differentiated human embryonic stem cells. (cell line)		TAX577743(Rovira)
total RNA. (breast)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
............................................................................................................................TGGCGGCGGGAGAACCA............................................................................................1714.000.005.00-2.00-2.00--1.00-1.00-----1.00-----1.00------------------1.00--------
...............................................................................................................................CGGCGGGAGAACTCGGCTAG......................................................................................2014.004.00-3.00----------------------------1.00------------------
............................................................................................................................TGGCGGCGGGAGAACA.............................................................................................164.000.002.00-1.00------1.00---------------------------------------
...............................CAGCCAAAGTCTTGAACGT.......................................................................................................................................................................................1913.003.00---3.00---------------------------------------------
.............................................................................................................................GGCGGCGGGAGAACTA............................................................................................163.000.00-------1.00--1.00----1.00---------------------------------
..............................................................................................................................GCGGCGGGAGAACTCTG..........................................................................................172.000.001.00-------------------------1.00----------------------
............................................................................................................................TGGCGGCGGGAGAACAA............................................................................................172.000.001.00-1.00----------------------------------------------
...............................................................................................................................................................TAGGTCCCCGCCTTGCCCTCG.....................................................2112.002.00------------------------1.00--------------1.00---------
..................................................GTAAGTGTAGACGCG........................................................................................................................................................................1512.002.00-----2.00-------------------------------------------
..............................................................GCGGCCCAGGCTGGGAGAC........................................................................................................................................................1911.001.00--------------------------------------1.00----------
............................................................................................................................TGGCGGCGGGAGAACCAA...........................................................................................181.000.00----------------1.00--------------------------------
...............................................................................................................................................................TAGGTCCCCGCCTTGCCCTCGCA...................................................2311.001.00-------------------------------------1.00-----------
.....................................................................AGGCTGGGAGACAGGGGTG.................................................................................................................................................191.000.00-----------------------------------1.00-------------
.....................................................................................................AGGAGACTGGCGGATGGG..................................................................................................................1811.001.00----------------------------------1.00--------------
.............................................................................................................................GGCGGCGGGAGAACTGTAA.........................................................................................191.000.00--------------------------------1.00----------------
...............................................................................................................................................................................CCTCGCAGGGACCCCGACAA......................................2011.001.00-------------------------------------------1.00-----
...............................................................................................................................CGGCGGGAGAACTCGGCTAGCT....................................................................................221.000.00----------------------------------------------1.00--
........................................................................................................................................................................................................................TGCGGGTGAGGAGGAGGGT191.000.00------------------1.00------------------------------
........................................................GTAGACGCGGCCCAGCGG...............................................................................................................................................................181.000.00-1.00-----------------------------------------------
.............................................AACGTGTAAGTGTAGACGCGGCC.....................................................................................................................................................................2311.001.00------------1.00------------------------------------
...............................................................................................................................CGGCGGGAGAACTCGGCTAGCC....................................................................................2211.001.00-1.00-----------------------------------------------
...............................................................................................................................CGGCGGGAGAACTCGGCTAGA.....................................................................................2111.004.00-------------------------1.00-----------------------
...............................................................................................................................CGGCGGGAGAACTCGGCTAGCA....................................................................................221.000.00----------1.00--------------------------------------
.............................................AACGTGTAAGTGTAGACGCGGC......................................................................................................................................................................2211.001.00------------------------------------1.00------------
...............................................................................................................................................................TAGGTCCCCGCCTTGCCCTCGCAG..................................................2411.001.00--1.00----------------------------------------------
...............................................................................................................................................................TAGGTCCCCGCCTTGCCCTCGA....................................................2211.002.00----------------------1.00--------------------------
...............................................................................................................................................................TAGGTCCCCGCCTTGCCCTCGCAT..................................................2411.001.00-------------------1.00-----------------------------
........................................................................................GGGGTGAATGGCGAGCGCG..............................................................................................................................191.000.00-------------------------------1.00-----------------
...............................................................................................................................CGGCGGGAGAACTCGGCTAGCCAT..................................................................................2411.001.00-------------1.00-----------------------------------
...........................................................................................................................................TCGGCTAGCCGGTTCTG.............................................................................1711.001.00--------------1.00----------------------------------
........................................................GTAGACGCGGCCCAGTGG...............................................................................................................................................................181.000.00-----------------------------------------------1.00-
..........................................................................................................ACTGGCGGATGGGAGGGGTGGCGGC......................................................................................................2511.001.00----------------------------1.00--------------------
............................................................................................................................TGGCGGCGGGAGAACCC............................................................................................171.000.00--------------------------------------------1.00----
............................................................................................................................TGGCGGCGGGAGAACTA............................................................................................171.000.00-----------------------1.00-------------------------
...............................................................................................................................................................TAGGTCCCCGCCTTGCCCTCGC....................................................2211.001.00------1.00------------------------------------------
.............................................................................................................................GGCGGCGGGAGAACTCGGCTA.......................................................................................2111.001.00-1.00-----------------------------------------------
..................................................................................................................................................................GTCCCCGCCTTGCCCTCGCAGTA................................................231.000.00----------------1.00--------------------------------
...........................................................................................................................................................................................................TCTGTGTGCTGGCTGCGGGT..........2011.001.00------------1.00------------------------------------
...............................................................................ACAGGGGCGGGGGTGGCT........................................................................................................................................181.000.00--------------1.00----------------------------------
............................................................................................................................TGGCGGCGGGAGAACTCGGCTAGC.....................................................................................2411.001.00-------------1.00-----------------------------------
.........................................................................................................................................................................................................CTTCTGTGTGCTGGCTG...............1730.330.33------------------------------------------------0.33
.....................................................................................................................GGAGGGGTGGCGGCGGAGGC................................................................................................2070.140.14-----------------0.14-------------------------------
.....................................................................................................................GGAGGGGTGGCGGCGG....................................................................................................1670.140.14-----0.14-------------------------------------------

Antisense strand
CAGGGCTGCCTCACTGCCGGCGTCTACGAGTCAGCCAAAGTCTTGAACGTGTAAGTGTAGACGCGGCCCAGGCTGGGAGACAGGGGCGGGGGTGAATGGCGAGGAGACTGGCGGATGGGAGGGGTGGCGGCGGGAGAACTCGGCTAGCCGGTTCTGACCTAGGTCCCCGCCTTGCCCTCGCAGGGACCCCGACAATGTGACCTTCTGTGTGCTGGCTGCGGGTGAGGAGGACG
........................................................................................................................(((((((.((((((.((((.(((....))))))).(((....)))))))))))))))).......................................................
.......................................................................................................................120............................................................183................................................
SizePerfect hitTotal NormPerfect NormSRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		GSM532887(GSM532887)
G761N. (cervix)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)		SRR040016(GSM532901)
G645N. (cervix)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		TAX577579(Rovira)
total RNA. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		TAX577738(Rovira)
total RNA. (breast)		SRR444054(SRX128902)
Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR189784SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR040011(GSM532896)
G529T. (cervix)		SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)		SRR191566(GSM715676)
94genomic small RNA (size selected RNA from t. (breast)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040036(GSM532921)
G243N. (cervix)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR037937(GSM510475)
293cand2. (cell line)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR040031(GSM532916)
G013T. (cervix)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		TAX577739(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM339994(GSM339994)
hues6. (cell line)		SRR191594(GSM715704)
70genomic small RNA (size selected RNA from t. (breast)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR015365(GSM380330)
Memory B cells (MM139). (B cell)		SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		GSM532879(GSM532879)
G659N. (cervix)		TAX577745(Rovira)
total RNA. (breast)		GSM541797(GSM541797)
differentiated human embryonic stem cells. (cell line)		TAX577743(Rovira)
total RNA. (breast)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
....................................................................CAGGCTGGGAGACAGGGC................................................................................................................................................... 183.000.00--------2.00---------------------------------1.00------
............CTCGTAGACGCCGGCAGT........................................................................................................................................................................................................... 1811.001.00--------------------1.00----------------------------
.............GACTCGTAGACGCCGGCAG......................................................................................................................................................................................................... 1911.001.00-----------------1.00-------------------------------
.............................................................................................................................................................................GCCCTCGCAGGGACCGCCA......................................... 191.000.00-----------------------------1.00-------------------
....................................................................CAGGCTGGGAGACAGGGGCT................................................................................................................................................. 201.000.00---------------------------1.00---------------------
..................TTCAAGACTTTGGCTGACTCGTAGACGCC.......................................................................................................................................................................................... 2911.001.00------1.00------------------------------------------
......CTCGTAGACGCCGGCAGTGAGGCA........................................................................................................................................................................................................... 2411.001.00-----------1.00-------------------------------------
..........................................................................................................................................................................................................................CGGGTGAGGAGGACGTA 171.000.00----1.00--------------------------------------------
............................................................................................................................................................................................AGAAGGTCACATTGTCGG........................... 1811.001.00---------------------------------1.00---------------
.....................................................................................GCGGGGGTGAATGGCGGGG................................................................................................................................. 191.000.00---------------------------------------------1.00---
................CCGGCGTCTACGAGTCAGCCAAA.................................................................................................................................................................................................. 231.000.00-----------------------------------------1.00-------
.............GGCTGACTCGTAGACGCCGGCAG..................................................................................................................................................................................................... 2311.001.00-----------1.00-------------------------------------