ID: uc004apl.2_intron_0_0_chr9_90341224_f.5p
GENE: (1)
chr9:90341174-90341423+


(1)
AGO2.ip
(2)
BRAIN
(16)
BREAST
(18)
CELL-LINE
(18)
CERVIX
(1)
FIBROBLAST
(7)
HEART
(2)
HELA
(8)
LIVER
(3)
OTHER
(41)
SKIN
(1)
XRN.ip

Sense strand
CACCAGCCCTGGCAACGAGAGCGTCTACCCCGAACTCTGCTGGCCTTGAGGTGGGGAAGCCGGGGAGGGCAGTTGAGGACCCCGCGGAGGCGCGTGACTGGTTGAGCGGGCAGGCCAGCCTCCGAGCCGGGTGGACACAGGTACCGCAGCCAGGCCGCGCCGCGCCGACTCAGGGCCTGGCCCGGCCAGACAGGGAAGCTCAGTCCCCGCACGCCAGACAGCGGTACTCCTGCTGGCGTCACCGCAAACA
..................................................((((((..(((......))).........)))))).....................................................................................................................................................................
..................................................51.................................................102..................................................................................................................................................
SizePerfect hitTotal NormPerfect NormGSM532877(GSM532877)
G691N. (cervix)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR040008(GSM532893)
G727N. (cervix)
TAX577743(Rovira)
total RNA. (breast)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR040016(GSM532901)
G645N. (cervix)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
TAX577741(Rovira)
total RNA. (breast)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040012(GSM532897)
G648N. (cervix)
SRR040032(GSM532917)
G603N. (cervix)
TAX577744(Rovira)
total RNA. (breast)
TAX577589(Rovira)
total RNA. (breast)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR040039(GSM532924)
G531T. (cervix)
SRR444043(SRX128891)
Sample 4cDNABarcode: AF-PP-339: ACG CTC TTC C. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040018(GSM532903)
G701N. (cervix)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR040030(GSM532915)
G013N. (cervix)
SRR207117(GSM721079)
Whole cell RNA. (cell line)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR040010(GSM532895)
G529N. (cervix)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
TAX577746(Rovira)
total RNA. (breast)
SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)
SRR191633(GSM715743)
85genomic small RNA (size selected RNA from t. (breast)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
GSM339995(GSM339995)
hues6NP. (cell line)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM532881(GSM532881)
G696N. (cervix)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR037937(GSM510475)
293cand2. (cell line)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR040007(GSM532892)
G601T. (cervix)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040022(GSM532907)
G575N. (cervix)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
TAX577590(Rovira)
total RNA. (breast)
SRR040014(GSM532899)
G623N. (cervix)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR037941(GSM510479)
293DroshaTN. (cell line)
SRR040038(GSM532923)
G531N. (cervix)
SRR191624(GSM715734)
31genomic small RNA (size selected RNA from t. (breast)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR191595(GSM715705)
72genomic small RNA (size selected RNA from t. (breast)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR191600(GSM715710)
90genomic small RNA (size selected RNA from t. (breast)
TAX577579(Rovira)
total RNA. (breast)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191619(GSM715729)
166genomic small RNA (size selected RNA from . (breast)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
GSM532879(GSM532879)
G659N. (cervix)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM532887(GSM532887)
G761N. (cervix)
TAX577738(Rovira)
total RNA. (breast)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR040024(GSM532909)
G613N. (cervix)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040020(GSM532905)
G699N_2. (cervix)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
...............................................................................CCCCGCGGAGGCGCGCCGG........................................................................................................................................................195106.201.003.0010.006.007.002.00---4.004.004.003.002.002.003.001.002.00-2.002.00-2.00-0.202.001.002.002.001.00-2.001.001.002.002.002.00-1.00-----1.00----1.001.00--1.001.00--1.00-1.001.00---------1.001.001.001.00-1.001.00-1.001.001.00-1.001.001.00--1.00-------1.00---1.00-1.00-----1.00-1.00--1.00-1.00--
...............................................................................CCCCGCGGAGGCGCGCCG.........................................................................................................................................................18522.001.007.001.001.00-2.00---1.00------2.001.00--1.00-1.00---------1.00----------1.00--------------------1.00-----------------------1.00-----------------1.00----------
...............................................................................CCCCGCGGAGGCGCGCC..........................................................................................................................................................1754.001.00-1.001.00------------------------------------1.00---------------------------------------------------------1.00------------------
......................................................................AGTTGAGGACCCCGCGGAGGCGCGCG..........................................................................................................................................................2612.001.00-----2.00--------------------------------------------------------------------------------------------------------------
...............................................................................CCCCGCGGAGGCGCGACG.........................................................................................................................................................1852.001.002.00-------------------------------------------------------------------------------------------------------------------
.ACCAGCCCTGGCAACGAGAGCGTCTA...............................................................................................................................................................................................................................2612.002.00------------------------------------2.00-------------------------------------------------------------------------------
................................................................................CCCGCGGAGGCGCGTCGG........................................................................................................................................................182.000.00--------------------------------------------------1.00-------------------------------------------------------------1.00---
....................................................................................................................AGCCTCCGAGCCGGGCAG....................................................................................................................181.000.00--------------------------------------1.00-----------------------------------------------------------------------------
...............................................................................CCCCGCGGAGGCGCGCTAG........................................................................................................................................................1951.001.001.00-------------------------------------------------------------------------------------------------------------------
..CCAGCCCTGGCAACGAGAGCGTCT................................................................................................................................................................................................................................2411.001.00-------------------------1.00------------------------------------------------------------------------------------------
...............................................................................CCCCGCGGAGGCGCG............................................................................................................................................................1551.001.00---------0.20---0.20----------0.20--------------0.20---------------------------------------------------------------------------0.20
..........................................................................................CGCGTGACTGGTTGAGCGGGCAGGC.......................................................................................................................................2511.001.00----------------------------------------1.00---------------------------------------------------------------------------
...............................GAACTCTGCTGGCCTTGAGG.......................................................................................................................................................................................................2011.001.00-------------------------------------------------------1.00------------------------------------------------------------
.........................................................................................................................................................................................................AGTCCCCGCACGCCAGACAGCG...........................2211.001.00------1.00-------------------------------------------------------------------------------------------------------------
......................................................................AGTTGAGGACCCCGCGGAGGCGCG............................................................................................................................................................2411.001.00---------------------------------------------------------------------------------------------------1.00----------------
................................................AGGTGGGGAAGCCGGGGAGGGCAGTTGAGGACC.........................................................................................................................................................................3311.001.00----------------------1.00---------------------------------------------------------------------------------------------
.....................................................GGGAAGCCGGGGAGGACCA..................................................................................................................................................................................191.000.00-------------------------------------------------------------------------------------1.00------------------------------
...................................................................................GCGGAGGCGCGTGACTGGTTGAGCGGG............................................................................................................................................2711.001.00-----------------------1.00--------------------------------------------------------------------------------------------
...............................................................................CCCCGCGGAGGCGCGCCC.........................................................................................................................................................1851.001.001.00-------------------------------------------------------------------------------------------------------------------
...........GCAACGAGAGCGTCTACCCCC..........................................................................................................................................................................................................................211.000.00-------------------------------------------------------------------------------------------------------1.00------------
...................................................................................GCGGAGGCGCGTGACTGGTTGAGCGGGC...........................................................................................................................................2811.001.00-----------------------1.00--------------------------------------------------------------------------------------------
........................................................................................................................TCCGAGCCGGGTGGACACAGGTAC..........................................................................................................2411.001.00---------------------------------------------------------1.00----------------------------------------------------------
..........................................................................................................CGGGCAGGCCAGCCTCCGAGCCGG........................................................................................................................2411.001.00---------------------------------------------1.00----------------------------------------------------------------------
......CCCTGGCAACGAGAGCGTCTA...............................................................................................................................................................................................................................2111.001.00--------------------------------------------------------------------1.00-----------------------------------------------
....................................................................GCAGTTGAGGACCCCGCGGAGGCGC.............................................................................................................................................................2511.001.00------1.00-------------------------------------------------------------------------------------------------------------
..........................ACCCCGAACTCTGCTGGCC.............................................................................................................................................................................................................1911.001.00-----------1.00--------------------------------------------------------------------------------------------------------
...............................................................................................................................................................CCGCGCCGACTCAGGGCCTGGCC....................................................................2311.001.00--------------------1.00-----------------------------------------------------------------------------------------------
.......CCTGGCAACGAGAGCGTCTACCCCGAACTCTG...................................................................................................................................................................................................................3211.001.00---------------------------------------------------------------------------------------------1.00----------------------
..........................ACCCCGAACTCTGCTGGCCTT...........................................................................................................................................................................................................2111.001.00-----------------------------------------------1.00--------------------------------------------------------------------
......................................................................................GAGGCGCGTGACTGGTTGAG................................................................................................................................................2011.001.00--------------------1.00-----------------------------------------------------------------------------------------------
......................................................................................................................................................................GACTCAGGGCCTGGCCCGGCCAGACAGGGA......................................................3011.001.00---------------------------------------------------1.00----------------------------------------------------------------
.............AACGAGAGCGTCTACCC............................................................................................................................................................................................................................1711.001.00------------------------------------------------------------------------------------------1.00-------------------------
.......................................................................................AGGCGCGTGACTGGTTGAGC...............................................................................................................................................2011.001.00----------------------------------------------------------------1.00---------------------------------------------------
..............................................................................ACCCCGCGGAGGCGCGCCGG........................................................................................................................................................201.000.00------------------1.00-------------------------------------------------------------------------------------------------
..........................................................................................CGCGTGACTGGTTGAGCGGG............................................................................................................................................2011.001.00--------------------------------------------------------------------------------------------------------1.00-----------
.............................CCGAACTCTGCTGGCCTTGAGGTG.....................................................................................................................................................................................................2411.001.00------1.00-------------------------------------------------------------------------------------------------------------
........................................................................................................AGCGGGCAGGCCAGCCTCCGAGCCGGGGGAC...................................................................................................................311.000.00--------------------------------------------------------------------------------1.00-----------------------------------
.......................................................................................................................................................AGGCCGCGCCGCGCCGACTAGGA............................................................................231.000.00------1.00-------------------------------------------------------------------------------------------------------------
.......................................................................................AGGCGCGTGACTGGTTGAG................................................................................................................................................1911.001.00--------------------1.00-----------------------------------------------------------------------------------------------
......................................................................AGTTGAGGACCCCGCGGAGG................................................................................................................................................................2011.001.00-----------------------------------------------------------------------------------------1.00--------------------------
..............................................................................................TGACTGGTTGAGCGGGCA..........................................................................................................................................1811.001.00--------------------------------------------------------------1.00-----------------------------------------------------
...........GCAACGAGAGCGTCTACCC............................................................................................................................................................................................................................1911.001.00----------------------------------------------1.00---------------------------------------------------------------------
...........................................................................AGGACCCCGCGGAGGAGGA............................................................................................................................................................191.000.00-----1.00--------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................CGGCCAGACAGGGAAGCTC.................................................1911.001.00------------------------------------------------------------------------------------1.00-------------------------------
...........................CCCCGAACTCTGCTGGCCTTGAG........................................................................................................................................................................................................2311.001.00----------------------------1.00---------------------------------------------------------------------------------------
............................................................................................CGTGACTGGTTGAGCGGGCA..........................................................................................................................................2011.001.00-----------------1.00--------------------------------------------------------------------------------------------------
.........TGGCAACGAGAGCGTCCAC..............................................................................................................................................................................................................................191.000.00-----------------1.00--------------------------------------------------------------------------------------------------
............CAACGAGAGCGTCTACCC............................................................................................................................................................................................................................1811.001.00-----------------------------------------------------------------1.00--------------------------------------------------
.............AACGAGAGCGTCTACCCCGA.........................................................................................................................................................................................................................2011.001.00--------------------------------------------------------------------------------------------------------------1.00-----
.......................................................................................................GAGCGGGCAGGCCAGGAG.................................................................................................................................181.000.00-----------------1.00--------------------------------------------------------------------------------------------------
..............................................................................................TGACTGGTTGAGCGGGCAG.........................................................................................................................................1911.001.00------1.00-------------------------------------------------------------------------------------------------------------
.............AACGAGAGCGTCTACC.............................................................................................................................................................................................................................1611.001.00-----------------------------------------1.00--------------------------------------------------------------------------
.ACCAGCCCTGGCAACGGCA......................................................................................................................................................................................................................................191.000.00-----1.00--------------------------------------------------------------------------------------------------------------
.............................................................................................................................GCCGGGTGGACACAGGTA...........................................................................................................1811.001.00----------------------------------------------------------------------------------------1.00---------------------------
.....................................................................................................................................................................CGACTCAGGGCCTGG......................................................................1530.330.33-------------------------------------0.33------------------------------------------------------------------------------

Antisense strand
CACCAGCCCTGGCAACGAGAGCGTCTACCCCGAACTCTGCTGGCCTTGAGGTGGGGAAGCCGGGGAGGGCAGTTGAGGACCCCGCGGAGGCGCGTGACTGGTTGAGCGGGCAGGCCAGCCTCCGAGCCGGGTGGACACAGGTACCGCAGCCAGGCCGCGCCGCGCCGACTCAGGGCCTGGCCCGGCCAGACAGGGAAGCTCAGTCCCCGCACGCCAGACAGCGGTACTCCTGCTGGCGTCACCGCAAACA
..................................................((((((..(((......))).........)))))).....................................................................................................................................................................
..................................................51.................................................102..................................................................................................................................................
SizePerfect hitTotal NormPerfect NormGSM532877(GSM532877)
G691N. (cervix)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR040008(GSM532893)
G727N. (cervix)
TAX577743(Rovira)
total RNA. (breast)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR040016(GSM532901)
G645N. (cervix)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
TAX577741(Rovira)
total RNA. (breast)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040012(GSM532897)
G648N. (cervix)
SRR040032(GSM532917)
G603N. (cervix)
TAX577744(Rovira)
total RNA. (breast)
TAX577589(Rovira)
total RNA. (breast)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR040039(GSM532924)
G531T. (cervix)
SRR444043(SRX128891)
Sample 4cDNABarcode: AF-PP-339: ACG CTC TTC C. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040018(GSM532903)
G701N. (cervix)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR040030(GSM532915)
G013N. (cervix)
SRR207117(GSM721079)
Whole cell RNA. (cell line)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR040010(GSM532895)
G529N. (cervix)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
TAX577746(Rovira)
total RNA. (breast)
SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)
SRR191633(GSM715743)
85genomic small RNA (size selected RNA from t. (breast)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
GSM339995(GSM339995)
hues6NP. (cell line)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM532881(GSM532881)
G696N. (cervix)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR037937(GSM510475)
293cand2. (cell line)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR040007(GSM532892)
G601T. (cervix)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040022(GSM532907)
G575N. (cervix)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
TAX577590(Rovira)
total RNA. (breast)
SRR040014(GSM532899)
G623N. (cervix)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR037941(GSM510479)
293DroshaTN. (cell line)
SRR040038(GSM532923)
G531N. (cervix)
SRR191624(GSM715734)
31genomic small RNA (size selected RNA from t. (breast)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR191595(GSM715705)
72genomic small RNA (size selected RNA from t. (breast)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR191600(GSM715710)
90genomic small RNA (size selected RNA from t. (breast)
TAX577579(Rovira)
total RNA. (breast)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191619(GSM715729)
166genomic small RNA (size selected RNA from . (breast)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
GSM532879(GSM532879)
G659N. (cervix)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM532887(GSM532887)
G761N. (cervix)
TAX577738(Rovira)
total RNA. (breast)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR040024(GSM532909)
G613N. (cervix)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040020(GSM532905)
G699N_2. (cervix)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
....................................................................................................................................................................GGGCCAGGCCCTGAGTCGG................................................................... 1912.002.00-------------1.00------------------------------------------------------------------------------1.00-----------------------
..CCAGCCCTGGCAACGCCT...................................................................................................................................................................................................................................... 181.000.00-----1.00--------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................CGGCGCGGCGCGGCCTGG................................................................................... 1811.001.00-------------------------------------------------------------------------------------------1.00------------------------
............................................................................................................................................CGCGGCGCGGCCTGGCTGCGGTAC...................................................................................... 2411.001.00-------------------------------------------------------------1.00------------------------------------------------------
.......................................................................................................................................GCCTGGCTGCGGTACCTGTG............................................................................................... 2011.001.00------------1.00-------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................GAGTACCGCTGTCTGGCGTGC..................... 2111.001.00------------------------------------------------------------1.00-------------------------------------------------------
..............................................................................................................................................................AGGCCCTGAGTCGGCGCGGC........................................................................ 2011.001.00------------------------------------------------------------------------------------------------------1.00-------------
....................................CTGCTGGCCTTGAGGCTTC................................................................................................................................................................................................... 191.000.00----1.00---------------------------------------------------------------------------------------------------------------
............................................................................................................................TGCGGTACCTGTGTCCACCCGGCT...................................................................................................... 2411.001.00------------1.00-------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................TCTGGCGTGCGGGGACTGAGCTTC................................ 2411.001.00------------------------------------------------------1.00-------------------------------------------------------------
.........................................................................................................................................CGCGGCGCGGCCTGGCTGCGGTACCTG...................................................................................... 2711.001.00------------------------------------------------------------------1.00-------------------------------------------------
..................................................................................................................................GGCTGCGGTACCTGTGTCCAC................................................................................................... 2111.001.00-----------------------------------------------------------------------------------------------------------1.00--------
......................................................................................................................................................................CGGGCCAGGCCCTGAGTC.................................................................. 1811.001.00-----------------------------------------------------------------------------------------------1.00--------------------
.....................................................................................................................................................................CGACTCAGGGCCTGGCCCC.................................................................. 191.000.00-------------------------------------------------------------------------------------------------------------1.00------
..................................................................................................................................GCTGCGGTACCTGTGTCCAC.................................................................................................... 2011.001.00-------1.00------------------------------------------------------------------------------------------------------------
....................................................................................................................................GGACACAGGTACCGCAGCCC.................................................................................................. 201.000.00-------1.00------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................AGGCCCTGAGTCGGCGCGG........................................................................ 1911.001.00-----------------------------1.00--------------------------------------------------------------------------------------
.....................................................................................................................................................AGTCGGCGCGGCGCGGCCTGG................................................................................ 2111.001.00------------------------------------------------------------------------------------------------1.00-------------------
.................................................GGTGGGGAAGCCGGGGAA....................................................................................................................................................................................... 181.000.00--------------------------------1.00-----------------------------------------------------------------------------------
...........................................................................................................................CGGTACCTGTGTCCACCCGGCTC........................................................................................................ 2311.001.00-------------------------------------------------------------------1.00------------------------------------------------
..................................................................................................................................................CGCGGCGCGGCCTGGCTG...................................................................................... 1811.001.00-----------------------------1.00--------------------------------------------------------------------------------------
.......................AGGCCAGCAGAGTTCGGGGTAGA............................................................................................................................................................................................................ 2311.001.00----------------------------------------------------------------------------1.00---------------------------------------
.................................................................................................................CCCGGCTCGGAGGCTGGC....................................................................................................................... 1811.001.00--------------------------------------------1.00-----------------------------------------------------------------------
.....................................................................................................................GCCTCCGAGCCGGGTCCA................................................................................................................... 181.000.00-------------------------------------------------------------------------1.00------------------------------------------
.........................................................................................................................................CGGCCTGGCTGCGGTACCTG............................................................................................. 2011.001.00-------1.00------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................GGGAAGCTCAGTCCCCCGC....................................... 191.000.00-----------------------------------------------------------------------------------------------------1.00--------------
.............................................................................................................................ACCTGTGTCCACCCGGC............................................................................................................ 1720.500.50------------------------------------------------------------------------------------------------------------------0.50-
....................................................GGGGAAGCCGGGGAGGCAC................................................................................................................................................................................... 190.200.00--------------------------------------0.20-----------------------------------------------------------------------------
....................................................CCTCCCCGGCTTCCCC...................................................................................................................................................................................... 1650.200.20----------------------0.20---------------------------------------------------------------------------------------------