ID: uc004ajk.1_intron_37_0_chr9_77473665_r.3p
GENE: TRPM6(1)
chr9:77473615-77473864-


(4)
CELL-LINE
(1)
FIBROBLAST
(1)
HEART
(5)
OTHER
(2)
SKIN

Sense strand
TCGTTTAATGTTCACATTTGGCTTATTTGTGCCTATGTTATCTGTAATAGAAACTGGTAAATGCTTAGCCTGTGTGGGGTTGGTCTTGGCATTTTAATTAGCATTCATGATACTTGAGTATTTCTTACCTGCAGGAACTACTATGGTTACATTGTTTTGTCACATAATTAGAGTATAAAATAATGACACTTTCTTTTTAGTCCCAGAAATCCTGGATTAAAGGAGTATTTGACAAGAGAGAATGTAGCAC
.....................................................((((((((((((((((((.....)))))).....)))))))..)))))..........(((..((((.(((((......))))).))))..)))..(((((((((((.((.........))))))))))))).................................................................
..................................................51...................................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR343333(GSM796036)
KSHV (HHV8). (cell line)
SRR343334SRR343335SRR343336SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR189782SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR343337SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
...........................................................AATGCTTAGCCTGTGTCCGA...........................................................................................................................................................................20368.002.0067.67--------0.33---
............................................................ATGCTTAGCCTGTGTCCGA...........................................................................................................................................................................1955.000.0055.00------------
.........................................................TAAATGCTTAGCCTGTGTCCGA...........................................................................................................................................................................2219.000.0019.00------------
............................................................ATGCTTAGCCTGTGTCCG............................................................................................................................................................................188.000.005.002.001.00----------
...........................................................AATGCTTAGCCTGTGTCCG............................................................................................................................................................................1937.332.007.00--------0.33---
...........................................................AATGCTTAGCCTGTGCCCG............................................................................................................................................................................193.000.001.001.001.00----------
...........................................................AATGCTTAGCCTGTGTCCGT...........................................................................................................................................................................2032.672.002.67------------
...........................................................AATGCTTAGCCTGTGT...............................................................................................................................................................................1632.002.00---1.67-------0.33-
..........................................................AAATGCTTAGCCTGTGTCCGA...........................................................................................................................................................................212.000.002.00------------
...............................................TAGAAACTGGTAAATATCG........................................................................................................................................................................................191.000.00-----1.00-------
.........................................................TAAATGCTTAGCCTGTGTGCGA...........................................................................................................................................................................221.000.001.00------------
..................................................................................................................................................................................AATAATGACACTTTCTTTTTAGA.................................................231.000.00-------1.00-----
............................................................ATGCTTAGCCTGTGTCCGT...........................................................................................................................................................................191.000.001.00------------
............................................................ATGCTTAGCCTGTGTCA.............................................................................................................................................................................171.000.001.00------------
...........................................................................................................................................................................................ACTTTCTTTTTAGTCTTTC............................................191.000.00--------1.00----
...........................................................AATGCTTAGCCTGTGTCCGG...........................................................................................................................................................................2030.332.000.33------------
...........................................................AATGCTTAGCCTGTGTCGGA...........................................................................................................................................................................2030.332.000.33------------
...........................................................AATGCTTAGCCTGTGTCAA............................................................................................................................................................................1930.332.000.33------------
...............................................................................................................................................................................................................AATCCTGGATTAAAGG...........................1630.330.33----------0.33--
...................................................................................................................................................................ATAATTAGAGTATAAA.......................................................................1690.110.11------------0.11

Antisense strand
TCGTTTAATGTTCACATTTGGCTTATTTGTGCCTATGTTATCTGTAATAGAAACTGGTAAATGCTTAGCCTGTGTGGGGTTGGTCTTGGCATTTTAATTAGCATTCATGATACTTGAGTATTTCTTACCTGCAGGAACTACTATGGTTACATTGTTTTGTCACATAATTAGAGTATAAAATAATGACACTTTCTTTTTAGTCCCAGAAATCCTGGATTAAAGGAGTATTTGACAAGAGAGAATGTAGCAC
.....................................................((((((((((((((((((.....)))))).....)))))))..)))))..........(((..((((.(((((......))))).))))..)))..(((((((((((.((.........))))))))))))).................................................................
..................................................51...................................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR343333(GSM796036)
KSHV (HHV8). (cell line)
SRR343334SRR343335SRR343336SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR189782SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR343337SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
.......................................................................................................................................................................................................................................ACAAGAGAGAATGTAGCGTTT 211.000.00----1.00--------
........................................................................................................................................................TGTTTTGTCACATAACGCC............................................................................... 191.000.00------1.00------