ID: uc004afn.2_intron_8_0_chr9_69407241_f.5p
GENE: (9)
chr9:69407191-69407440+


(2)
AGO2.ip 		(5)
B-CELL 		(4)
BRAIN 		(14)
CELL-LINE 		(1)
KIDNEY 		(1)
LIVER 		(2)
OTHER 		(7)
SKIN 		(1)
TESTES

Sense strand
TGGATCTTCGCATGAAAAAGGAAACAGAATAGTCAATGGACAAGGAGAAGGTGAGAACCGTATTTTATTTAAAAAGTCTTTTGATGGAGGCCGGGTGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCCAGACCATCCTGGATAACATGGTGAAACCCCATCTCTACTAAAAATACAAAAAACTAGCCAGGTGTTGTTGTGGGCACCTGTAG
...........................................................................((((((((((.(((((((....))))..))).(((((((..((((((....)))))).......))))))).........)))))))))).....................................................................................
.............................................................62.......................................................................................................167.................................................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189784GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR553575(SRX182781)
source: Kidney. (Kidney)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		GSM956925PazD5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
............................................................................................................................................CGGGCGGATCACGAGGTCATGAA.......................................................................................238.000.00---8.00--------------------------------
................................TCAATGGACAAGGAGAAG........................................................................................................................................................................................................1855.405.40--0.20-4.00---0.40-0.20-----------------0.20-0.20--0.20--
...............................................................................................................................TGGGAGGCCGAGGCGGGCGGGGC....................................................................................................235.000.004.001.00----------------------------------
..............................................................................................................................TTGGGAGGCCGAGGCGGGCGGGGC....................................................................................................245.000.003.002.00----------------------------------
............................................................................................................................................................TCAGGAGATCCAGACCATCCTCTT......................................................................242.000.00------2.00-----------------------------
.............................................................................................................................TTTGGGAGGCCGAGGCGGGCGGGGC....................................................................................................252.000.002.00-----------------------------------
...................................................................................................................................AGGCCGAGGCGGGCGGATCACGAGGCAGG..........................................................................................292.000.002.00-----------------------------------
........................................................................................................................AGCACTTTGGGAGGCCGAGGCGGGCGGGGC....................................................................................................302.000.002.00-----------------------------------
...........................................................................................................................ACTTTGGGAGGCCGAGGCGGGCGGGGG....................................................................................................272.000.002.00-----------------------------------
..................................................................ATTTAAAAAGTCTTTTTAC.....................................................................................................................................................................192.000.00-----2.00------------------------------
...............................................................................................................................TGGGAGGCCGAGGCGGGCGGGGCT...................................................................................................242.000.00-2.00----------------------------------
...........................................................................................................................ACTTTGGGAGGCCGAGGCGGGCGGGGC....................................................................................................272.000.002.00-----------------------------------
............................................................................................................................................................TCAGGAGATCCAGACCATCCCTGC......................................................................242.000.00-2.00----------------------------------
................................TCAATGGACAAGGAGAAGG.......................................................................................................................................................................................................1951.201.20--1.20---------------------------------
................................................................................TTGATGGAGGCCGGGTGACGG.....................................................................................................................................................211.000.00-1.00----------------------------------
.........................................................................................................................................AGGCGGGCGGATCACGAGGGCGG..........................................................................................231.000.00---------------------------1.00--------
......................AACAGAATAGTCAATGGACAAGGACAAG........................................................................................................................................................................................................281.000.00---------1.00--------------------------
............................................................................................................................................CGGGCGGATCACGAGGTTAGG.........................................................................................211.000.00-------1.00----------------------------
...........................AATAGTCAATGGACAAGGAGAAGGGC.....................................................................................................................................................................................................261.000.00--1.00---------------------------------
.......................................................................................AGGCCGGGTGCGGTGGCTCACGCCTGCAGC.....................................................................................................................................301.000.001.00-----------------------------------
......................................................................................................................................................ACGAGGTCAGGAGATCCAGACCATCCGGC.......................................................................291.000.001.00-----------------------------------
..................................AATGGACAAGGAGAAGGG......................................................................................................................................................................................................181.000.00--------1.00---------------------------
..............................................................................................................................TTGGGAGGCCGAGGCGGGCGGAGGAC..................................................................................................261.000.00-1.00----------------------------------
...............................................................................................................................TGGGAGGCCGAGGCGGGCGGATCACGAGGGA............................................................................................311.000.001.00-----------------------------------
..........................................................................................CCGGGTGCGGTGGCTCTGG.............................................................................................................................................191.000.00----------------1.00-------------------
................................................................................................................................GGGAGGCCGAGGCGGGCGGGTCC...................................................................................................231.000.00--------------1.00---------------------
....................................................................................................................................................................................TAACATGGTGAAACCCCATCTCTATTTT..........................................281.000.00------------------------1.00-----------
.........................................................................................................................................................................ACCATCCTGGATAACATAGA.............................................................201.000.00-----------------------1.00------------
................................................................................................................................GGGAGGCCGAGGCGGGCGGGTCA...................................................................................................231.000.00----------------------1.00-------------
................................................................................................................................GGGAGGCCGAGGCGGGCGGG......................................................................................................201.000.00-------1.00----------------------------
............................................................................................................................................CGGGCGGATCACGAGGTCAGGTGC......................................................................................241.000.00------------1.00-----------------------
..................................AATGGACAAGGAGAAGGGC.....................................................................................................................................................................................................191.000.00--1.00---------------------------------
.........................................................................................GCCGGGTGCGGTGGCTCCGGC............................................................................................................................................211.000.00----------1.00-------------------------
...............................................................................................................................TGGGAGGCCGAGGCGGGCGGGGGT...................................................................................................241.000.00-1.00----------------------------------
.......................................................................................AGGCCGGGTGCGGTGGCTCACGCCGT.........................................................................................................................................261.000.001.00-----------------------------------
..............................................................................................................................TTGGGAGGCCGAGGCGGGCGGGTA....................................................................................................241.000.00-------------------------1.00----------
..........................................................................................................................CACTTTGGGAGGCCGAGGCGGGCGGTCC....................................................................................................281.000.00-1.00----------------------------------
.......................................................................................AGGCCGGGTGCGGTGGCTCACGCCCGC........................................................................................................................................271.000.001.00-----------------------------------
......................AACAGAATAGTCAATGGACAAGGAC...........................................................................................................................................................................................................251.000.00--1.00---------------------------------
.......................................................................................AGGCCGGGTGCGGTGGCTCAGGTC...........................................................................................................................................241.000.001.00-----------------------------------
.............................TAGTCAATGGACAAGGAGAACGGC.....................................................................................................................................................................................................241.000.00--1.00---------------------------------
...................................................................................................................................AGGCCGAGGCGGGCGGAGGAC..................................................................................................211.000.00-1.00----------------------------------
.............................................................................................................................TTTGGGAGGCCGAGGCGGGCGGG......................................................................................................231.000.00---------------------1.00--------------
...............................................................................................................................TGGGAGGCCGAGGCGGGCGGAGAGG..................................................................................................251.000.00-1.00----------------------------------
............................................................................................................................................CGGGCGGATCACGAGGTCAGGAGCCGG...................................................................................271.000.001.00-----------------------------------
.............................TAGTCAATGGACAAGGAGAAGGGCCT...................................................................................................................................................................................................2651.000.20--1.00---------------------------------
..............................................................................................................................TTGGGAGGCCGAGGCGGGCGGGTCC...................................................................................................251.000.00-1.00----------------------------------
.............................................................................................................................TTTGGGAGGCCGAGGCGGGCGGGGCC...................................................................................................261.000.00-1.00----------------------------------
.............................TAGTCAATGGACAAGGAGAAGTTGA....................................................................................................................................................................................................251.000.00--1.00---------------------------------
...............................................................................................................................TGGGAGGCCGAGGCGGGCGGGGCC...................................................................................................241.000.001.00-----------------------------------
............................................................................................................................CTTTGGGAGGCCGAGGCGGGCGGGGC....................................................................................................261.000.00-1.00----------------------------------
.................................CAATGGACAAGGAGAAG........................................................................................................................................................................................................1750.800.80--0.40-------------------------0.20---0.20---
......................AACAGAATAGTCAATGGACAAGGAG...........................................................................................................................................................................................................2550.600.60--0.60---------------------------------
.....................AAACAGAATAGTCAATGGACAAGGAG...........................................................................................................................................................................................................2650.400.40--0.40---------------------------------
..........................GAATAGTCAATGGACAAGGAGAAGG.......................................................................................................................................................................................................2550.400.40--0.40---------------------------------
......................AACAGAATAGTCAATGGACAAGGAGA..........................................................................................................................................................................................................2650.400.40--0.20------0.20--------------------------
...............AAAAGGAAACAGAATAGTCAATGGACA................................................................................................................................................................................................................2750.200.20--0.20---------------------------------
.................AAGGAAACAGAATAGTCAATGGACA................................................................................................................................................................................................................2550.200.20----------------------------0.20-------
..................AGGAAACAGAATAGTCAATGGACAAGGAGAA.........................................................................................................................................................................................................3150.200.20--0.20---------------------------------
........................CAGAATAGTCAATGGACAAGGAGAAG........................................................................................................................................................................................................2650.200.20--0.20---------------------------------
.................AAGGAAACAGAATAGTCAATGGACAAG..............................................................................................................................................................................................................2750.200.20--0.20---------------------------------
.............................TAGTCAATGGACAAGGAGAAGG.......................................................................................................................................................................................................2250.200.20--0.20---------------------------------
.......................ACAGAATAGTCAATGGACAAGGAGAA.........................................................................................................................................................................................................2650.200.20--0.20---------------------------------
......................AACAGAATAGTCAATGGACAAGGAGAAG........................................................................................................................................................................................................2850.200.20----------------------------------0.20-
.....................AAACAGAATAGTCAATGGACAAGGAGA..........................................................................................................................................................................................................2750.200.20--0.20---------------------------------
.......................ACAGAATAGTCAATGGACAAGGAGA..........................................................................................................................................................................................................2550.200.20-----------------------------0.20------
............TGAAAAAGGAAACAGAATAGTCAATGGACA................................................................................................................................................................................................................3050.200.20--0.20---------------------------------
........................CAGAATAGTCAATGGACAAGGAGAAGG.......................................................................................................................................................................................................2750.200.20--0.20---------------------------------
.........................AGAATAGTCAATGGACAAGGAGAAGG.......................................................................................................................................................................................................2650.200.20--0.20---------------------------------
....................GAAACAGAATAGTCAATGGACAAGGAGA..........................................................................................................................................................................................................2850.200.20--0.20---------------------------------
.................................CAATGGACAAGGAGAAGGTGAG...................................................................................................................................................................................................2250.200.20----0.20-------------------------------
.........................AGAATAGTCAATGGACAAGGA............................................................................................................................................................................................................2150.200.20-------------------------------0.20----
.......................ACAGAATAGTCAATGGACAAGGAGAAG........................................................................................................................................................................................................2750.200.20--0.20---------------------------------
.................................CAATGGACAAGGAGAA.........................................................................................................................................................................................................1660.170.17-----------0.17------------------------
....................................TGGACAAGGAGAAGGTGA....................................................................................................................................................................................................1860.170.17-----------------------------------0.17
.......TCGCATGAAAAAGGAAACAGAATAGTC........................................................................................................................................................................................................................2760.170.17--0.17---------------------------------
................................TCAATGGACAAGGAGA..........................................................................................................................................................................................................1680.120.12--0.12---------------------------------

Antisense strand
TGGATCTTCGCATGAAAAAGGAAACAGAATAGTCAATGGACAAGGAGAAGGTGAGAACCGTATTTTATTTAAAAAGTCTTTTGATGGAGGCCGGGTGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCCAGACCATCCTGGATAACATGGTGAAACCCCATCTCTACTAAAAATACAAAAAACTAGCCAGGTGTTGTTGTGGGCACCTGTAG
...........................................................................((((((((((.(((((((....))))..))).(((((((..((((((....)))))).......))))))).........)))))))))).....................................................................................
.............................................................62.......................................................................................................167.................................................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189784GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR553575(SRX182781)
source: Kidney. (Kidney)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		GSM956925PazD5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
.............GAAAAAGGAAACAGAATATTCT....................................................................................................................................................................................................................... 222.000.002.00-----------------------------------
.........................................................................................GCCGGGTGCGGTGGCTCACGCCTGTACGC.................................................................................................................................... 292.000.002.00-----------------------------------
..........................................................................................................................................................GGTCAGGAGATCCAGACCATCCTGGATC.................................................................... 281.000.00-1.00----------------------------------
............................................................................................GGGTGCGGTGGCTCACGCCTGTCGCG.................................................................................................................................... 261.000.00-1.00----------------------------------
....................................................................................................................................GGCCGAGGCGGGCGGAATTA.................................................................................................. 201.000.00---------------1.00--------------------
.................................................................................................................................GGAGGCCGAGGCGGGCGGATCACGGC............................................................................................... 261.000.00-------------1.00----------------------
.....................................................................................GGAGGCCGGGTGCGGTGGCTCACGCCTGTCCC..................................................................................................................................... 321.000.001.00-----------------------------------
...................................................................................................................................................TGGATCTCCTGACCTCGTGAT.................................................................................. 2101.001.00-----------1.00------------------------
.............................................................................................................................................................................TCCTGGATAACATGGTGAAACCCCATCTCTGG............................................. 321.000.00-1.00----------------------------------
..............................................................................................................................................................................................................AAAAATACAAAAAACTAGCCTT...................... 221.000.00-----1.00------------------------------
............................................................................................................................................CGGGCGGATCACGAGGTCAGACTC...................................................................................... 241.000.00------------------1.00-----------------
...............................................................................................................................................................................CTGGATAACATGGTGATTG........................................................ 191.000.00-------------------1.00----------------
....................................................................................................................................GGCCGAGGCGGGCGGATCACGAGGTCAGCCA....................................................................................... 311.000.00-1.00----------------------------------
.........................................................................................GCCGGGTGCGGTGGCTCACGCCTGTACGG.................................................................................................................................... 291.000.00-1.00----------------------------------
.....................................................................................GGAGGCCGGGTGCGGTGGCTCACGCCTGTGTG..................................................................................................................................... 321.000.00-1.00----------------------------------
.................................................................................................................................................CTGGATCTCCTGACCTCGTGATCC................................................................................. 2401.001.00--------------------1.00---------------
................................................................................................................................................................................................ACCCCATCTCTACTAAAAATACAAAAAAACC........................... 311.000.00-1.00----------------------------------
.......................................................................................................................................................................................CATGGTGAAACCCCATCTCTACTGCCC........................................ 271.000.001.00-----------------------------------
....................................................................................................................................GGCCGAGGCGGGCGGATCACGAGGTCCCG......................................................................................... 291.000.001.00-----------------------------------
....................................................................................................................................GGCCGAGGCGGGCGGATCACTG................................................................................................ 221.000.001.00-----------------------------------
............................................................................................................................................................TCAGGAGATCCAGACCAAG........................................................................... 191.000.00-----------------1.00------------------
..................................................................................ACAGGCGTGAGCCACCGCACCCGGCCTCCATC........................................................................................................................................ 3280.120.120.12-----------------------------------