ID: uc003zyd.2_intron_14_0_chr9_35806231_f
GENE: (15)
chr9:35806181-35806438+


(2)
AGO2.ip 		(1)
B-CELL 		(5)
BRAIN 		(1)
BREAST 		(10)
CELL-LINE 		(2)
CERVIX 		(5)
HEART 		(4)
LIVER 		(2)
OTHER 		(11)
SKIN 		(4)
UTERUS 		(1)
XRN.ip

Sense strand
GAGCGGCCAGACTTTGGACAGATTAAGGGCTTCATTCGGCGCTTTAACAAGTGAGAGGGCATTATGGGGCAGGGGCTTCCCAGGGATAGAAGACTCATTAGTCCTAGTGCATGAAGTGGGGCAGGTGGGACCAGAGGGTGGGTTGGATAGGAAGTCCTGGGAATCTTCAGAATCTTAGAGCAAGTGCCTTATCCTGGCCTCCCTCTAGGGAGGGTGGCACCAGCATATTGGACAACCTCCTGCTGCGCATGGAACAGT
....................................................................................................................................((((((.((((((((((((..((.((((((.((....)).)))))).)).....))).)))).)))))))))))....................................................
..............................................................................................................................127..............................................................................208................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR207117(GSM721079)
Whole cell RNA. (cell line)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		GSM532876(GSM532876)
G547T. (cervix)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR189787SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM532874(GSM532874)
G699T. (cervix)		SRR189782SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR029127(GSM416756)
A549. (cell line)		SRR038854(GSM458537)
MM653. (cell line)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
...................................................................................................................................CAGAGGGTGGGTTGGATAG............................................................................................................19116.0016.00-7.003.00-----3.00--------1.001.00----1.00-----------------------
...................................................................................................................................CAGAGGGTGGGTTGGATAGGAA.........................................................................................................22112.0012.007.00--2.00--1.00------------1.00----------------------1.00----
...................................................................................................................................CAGAGGGTGGGTTGGATAGGA..........................................................................................................2117.007.001.00----2.002.00-------------------------------1.00------1.00-
...................................................................................................................................CAGAGGGTGGGTTGGATAGGAT.........................................................................................................2216.007.006.00----------------------------------------------
...................................................................................................................................CAGAGGGTGGGTTGGATAGGAAG........................................................................................................2316.006.00---3.00--------1.00------------------1.00-1.00-------------
...................................................................................................................................CAGAGGGTGGGTTGGATAGGAAT........................................................................................................2313.0012.00------1.00------------------1.00-----------------1.00---
....................................................................................................................................................................................................................................TGGACAACCTCCTGCTGCGCA.........2113.003.00---------1.00---2.00---------------------------------
.................................ATTCGGCGCTTTAACAAGTGAGAGGGCAT....................................................................................................................................................................................................2913.003.00-------3.00---------------------------------------
...................................................................................................................................CAGAGGGTGGGTTGGATAGG...........................................................................................................2012.002.00-----------1.00--------------------------------1.00--
...................................................................................................................................CAGAGGGTGGGTTGGATA.............................................................................................................1812.002.00-1.001.00--------------------------------------------
........................AAGGGCTTCATTCGGCGCTTT.....................................................................................................................................................................................................................2112.002.00----2.00------------------------------------------
.................................................................................................................................ACCAGAGGGTGGGTTGGATAG............................................................................................................2112.002.00----------2.00------------------------------------
..................................TTCGGCGCTTTAACAA................................................................................................................................................................................................................1611.001.00----------------------------------------------1.00
...........................................................................................................................................................................................CTTATCCTGGCCTCCCTCTAGT.................................................221.000.00------------------------------------1.00----------
..............TGGACAGATTAAGGGCTTCA................................................................................................................................................................................................................................2011.001.00--------------------------1.00--------------------
....................................................................................................................................AGAGGGTGGGTTGGATAGGAA.........................................................................................................2111.001.00-----------1.00-----------------------------------
...................................................................................................................................CAGAGGGTGGGTTGGATAGGAAGA.......................................................................................................2411.006.00---------------1.00-------------------------------
....................................................................................................................................................................................................................................TGGACAACCTCCTGCTGCGCATGGAAC...2711.001.00----------------------------------------1.00------
....................GATTAAGGGCTTCATTCGGC..........................................................................................................................................................................................................................2011.001.00---------1.00-------------------------------------
.....GCCAGACTTTGGACAGATTAAGGGCTT..................................................................................................................................................................................................................................2711.001.00---------------------------------------1.00-------
...................................................................................................................................CAGAGGGTGGGTTGGATAGGAC.........................................................................................................2211.007.00--------------------1.00--------------------------
........................................................................GGGCTTCCCAGGGATACT........................................................................................................................................................................181.000.00---------------------1.00-------------------------
...............................TCATTCGGCGCTTTAACA.................................................................................................................................................................................................................1811.001.00----------------------1.00------------------------
..........................................................................................................................................................................................CCTTATCCTGGCCTCCCTCTAGT.................................................231.000.00------------------------------1.00----------------
.................................................................................................................................................................AATCTTCAGAATCTTAGAGCAA...........................................................................2211.001.00-----------------------------------------1.00-----
.......................................................................................................................................................................................................................................ACAACCTCCTGCTGCTCAT........191.000.00------------------------1.00----------------------
.......................................................................................................................................................................CAGAATCTTAGAGCAAGTGC.......................................................................2011.001.00----------------1.00------------------------------
..GCGGCCAGACTTTGGACAGATTAA........................................................................................................................................................................................................................................2411.001.00--------------------------------1.00--------------
..................CAGATTAAGGGCTTCATTCGGCGCTTT.....................................................................................................................................................................................................................2711.001.00-------------------------------------1.00---------
...............................TCATTCGGCGCTTTAACAAGTGAGAGGGCATTA..................................................................................................................................................................................................3311.001.00-----1.00-----------------------------------------
............TTTGGACAGATTAAGGGCTTCATTCGGCGCTT......................................................................................................................................................................................................................3211.001.00-----1.00-----------------------------------------
.......CAGACTTTGGACAGATTAAGGGCT...................................................................................................................................................................................................................................2411.001.00---------------1.00-------------------------------
...................................................................................................................................CAGAGGGTGGGTTGGAAAAA...........................................................................................................201.000.00--1.00--------------------------------------------
.............TTGGACAGATTAAGGGCTTCATTC.............................................................................................................................................................................................................................2411.001.00----1.00------------------------------------------
..GCGGCCAGACTTTGGAC...............................................................................................................................................................................................................................................1711.001.00------------1.00----------------------------------
..............TGGACAGATTAAGGGCTTCATTCG............................................................................................................................................................................................................................2411.001.00----1.00------------------------------------------
...................................................................................................................................CAGAGGGTGGGTTGGATAGGAAA........................................................................................................2311.0012.00-----------------------------------1.00-----------
.........................AGGGCTTCATTCGGCGCTTT.....................................................................................................................................................................................................................2011.001.00----1.00------------------------------------------
...........................................................................................................................................................................................CTTATCCTGGCCTCCCTCTAGA.................................................221.000.00----------------------------------1.00------------
..............................TTCATTCGGCGCTTTAACAAGTGAGAGGG.......................................................................................................................................................................................................2911.001.00----------------1.00------------------------------

Antisense strand
GAGCGGCCAGACTTTGGACAGATTAAGGGCTTCATTCGGCGCTTTAACAAGTGAGAGGGCATTATGGGGCAGGGGCTTCCCAGGGATAGAAGACTCATTAGTCCTAGTGCATGAAGTGGGGCAGGTGGGACCAGAGGGTGGGTTGGATAGGAAGTCCTGGGAATCTTCAGAATCTTAGAGCAAGTGCCTTATCCTGGCCTCCCTCTAGGGAGGGTGGCACCAGCATATTGGACAACCTCCTGCTGCGCATGGAACAGT
....................................................................................................................................((((((.((((((((((((..((.((((((.((....)).)))))).)).....))).)))).)))))))))))....................................................
..............................................................................................................................127..............................................................................208................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR207117(GSM721079)
Whole cell RNA. (cell line)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		GSM532876(GSM532876)
G547T. (cervix)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR189787SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM532874(GSM532874)
G699T. (cervix)		SRR189782SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR029127(GSM416756)
A549. (cell line)		SRR038854(GSM458537)
MM653. (cell line)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
.....................................................................................................................................................GGAAGTCCTGGGAATCTG........................................................................................... 182.000.00--------------2.00--------------------------------
..................................................................................................................................................................................AGCAAGTGCCTTATCTCCT............................................................. 191.000.00----------------------------1.00------------------
......................................................................................................................................CTTCCTATCCAACCCACCCT........................................................................................................ 2011.001.00---------------------------1.00-------------------
.......................................................................................................................................................................................................................................ACAACCTCCTGCTGCGATAG....... 201.000.00-----------------------------1.00-----------------