ID: uc003zww.2_intron_4_0_chr9_35556446_f.3p
GENE: (5)
chr9:35557711-35557960+


(2)
BRAIN 		(2)
BREAST 		(4)
CELL-LINE 		(5)
CERVIX 		(2)
HEART 		(2)
OTHER 		(5)
SKIN 		(1)
TESTES 		(1)
XRN.ip

Sense strand
GAAGTAAAGACAGGAAGAGCTTAAGAACTGGGCAGAACCAGAAAAGGGCCAGGCCTGAATGTTTTGATAAGACCCATGTGCAGATGTGGAGACGGAGTAAGTGTGGGAGCCCTTTCCCTGAGGAAACCTGAGGTTTCAGCCCCAGCTGAGTTGGTTAAGGACTTGCTCAGGGACCTGTCACATCACATTCTTCCCTGCAGGGCTGGTAAAAGCTGTTAACATCGCTGTGGACCTCATTGTGGCTCATTTT
..............................................................................(((((....(((...(((((..((((((.((.....((((((((.((.(((.....((((((....)))))).......)))..)).)))))))).)).))))))...)))))))))))))...................................................
.............................................................................78........................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR040009(GSM532894)
G727T. (cervix)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR040042(GSM532927)
G428N. (cervix)		SRR189784SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR040008(GSM532893)
G727N. (cervix)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		TAX577580(Rovira)
total RNA. (breast)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		GSM532875(GSM532875)
G547N. (cervix)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		GSM532873(GSM532873)
G699N. (cervix)		SRR553576(SRX182782)
source: Testis. (testes)		SRR191438(GSM715548)
175genomic small RNA (size selected RNA from . (breast)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
..................................................................................GATGTGGAGACGGAGAAG......................................................................................................................................................18182.000.00181.001.00----------------------
..................................................................................GATGTGGAGACGGAGAAGT.....................................................................................................................................................1979.000.0077.00-----2.00-----------------
..................................................................................GATGTGGAGACGGAGCAG......................................................................................................................................................189.000.007.001.00------------1.00---------
..................................................................................GATGTGGAGACGGAGCAGT.....................................................................................................................................................197.000.005.002.00----------------------
..................................................................................GATGTGGAGACGGAGACG......................................................................................................................................................185.000.005.00-----------------------
...................................................................................ATGTGGAGACGGAGTAGT.....................................................................................................................................................182.000.002.00-----------------------
..................................................................................GATGTGGAGACGGAGTAGT.....................................................................................................................................................192.000.002.00-----------------------
..............................................................................TGCAGATGTGGAGACGGA..........................................................................................................................................................1821.501.50-------1.50----------------
........................................................................................................................................................................................................................TAACATCGCTGTGGACCTCATTGTG.........2511.001.00-------------------1.00----
..................................................................................................................................................................................CACATCACATTCTTCCCAAT....................................................201.000.00---1.00--------------------
..................................................................................GATGTGGAGACGGAGCCG......................................................................................................................................................181.000.001.00-----------------------
........................GAACTGGGCAGAACCAGAAAAGGG..........................................................................................................................................................................................................2411.001.00----1.00-------------------
........................................................................................................................................................................................................................TAACATCGCTGTGGACCTCATTGTGG........2611.001.00---------------1.00--------
..................................................................................GATGTGGAGACGGAGATG......................................................................................................................................................181.000.001.00-----------------------
..................................................................................GATGTGGAGACGGAGACGT.....................................................................................................................................................191.000.001.00-----------------------
.......................................................................................GGAGACGGAGTAAGTGTGGGAG.............................................................................................................................................2211.001.00---------------------1.00--
............................................................................................................................................................AAGGACTTGCTCAGGAGGC...........................................................................191.000.00------------1.00-----------
....................................................................................................................................................................................CATCACATTCTTCCCTGCAG..................................................2011.001.00-----1.00------------------
..........................................................................................................................................................................................................................ACATCGCTGTGGACCTCATTGTGG........2411.001.00----------1.00-------------
......................................................................................................................................................................................................................GTTAACATCGCTGTGGACCTC...............2111.001.00----------------------1.00-
..............................................................................................................................................................................................................TAAAAGCTGTTAACATCG..........................1811.001.00-----------------1.00------
..................................................................................GATGTGGAGACGGAGCCGT.....................................................................................................................................................191.000.00-1.00----------------------
...............................................................TTGATAAGACCCATGTGCAGA......................................................................................................................................................................2111.001.00-----1.00------------------
.............................................................................................................................................................................................................................TCGCTGTGGACCTCATTGTGGC.......2211.001.00-----------1.00------------
..................................................................................GATGTGGAGACGGAGAGGT.....................................................................................................................................................191.000.001.00-----------------------
.......................................................................................................................................................................................................................TTAACATCGCTGTGGAC..................1711.001.00---------1.00--------------
................................................................................................................................................................................................................................CTGTGGACCTCATTGTGGCTCATT..2411.001.00--------------------1.00---
.........................................................................................................................................................................................................................................TCATTGTGGCTCATTGGTA191.000.00--------1.00---------------
..................................................................................GATGTGGAGACGGAGCACT.....................................................................................................................................................191.000.001.00-----------------------
..............................GGCAGAACCAGAAAAGG...........................................................................................................................................................................................................1730.330.33-----------------------0.33

Antisense strand
GAAGTAAAGACAGGAAGAGCTTAAGAACTGGGCAGAACCAGAAAAGGGCCAGGCCTGAATGTTTTGATAAGACCCATGTGCAGATGTGGAGACGGAGTAAGTGTGGGAGCCCTTTCCCTGAGGAAACCTGAGGTTTCAGCCCCAGCTGAGTTGGTTAAGGACTTGCTCAGGGACCTGTCACATCACATTCTTCCCTGCAGGGCTGGTAAAAGCTGTTAACATCGCTGTGGACCTCATTGTGGCTCATTTT
..............................................................................(((((....(((...(((((..((((((.((.....((((((((.((.(((.....((((((....)))))).......)))..)).)))))))).)).))))))...)))))))))))))...................................................
.............................................................................78........................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR040009(GSM532894)
G727T. (cervix)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR040042(GSM532927)
G428N. (cervix)		SRR189784SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR040008(GSM532893)
G727N. (cervix)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		TAX577580(Rovira)
total RNA. (breast)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		GSM532875(GSM532875)
G547N. (cervix)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		GSM532873(GSM532873)
G699N. (cervix)		SRR553576(SRX182782)
source: Testis. (testes)		SRR191438(GSM715548)
175genomic small RNA (size selected RNA from . (breast)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
.......AGACAGGAAGAGCTTAAA................................................................................................................................................................................................................................. 183.000.00--2.00---------------1.00-----
.......AGACAGGAAGAGCTTAAAA................................................................................................................................................................................................................................ 191.000.00--1.00---------------------
................................................................................................................................................................................................CCCTGCAGGGCTGGTAG......................................... 171.000.00----------------1.00-------
......AAGACAGGAAGAGCTTAA.................................................................................................................................................................................................................................. 181.000.00-------------1.00----------
....................................................................................................................................................................................................GCAGGGCTGGTAAAATTTG................................... 191.000.00---1.00--------------------
.........................................................................................................................................................................................................................AGGTCCACAGCGATGTT................ 1711.001.00----1.00-------------------