ID: uc003zwe.11
GENE: PIGO(1)
chr9:35095924-35096201-


(2)
AGO1.ip 		(1)
AGO1.ip OTHER.mut 		(3)
AGO2.ip 		(9)
B-CELL 		(8)
BRAIN 		(19)
BREAST 		(33)
CELL-LINE 		(3)
CERVIX 		(1)
FIBROBLAST 		(6)
HEART 		(4)
HELA 		(7)
LIVER 		(3)
OTHER 		(1)
RRP40.ip 		(30)
SKIN 		(1)
TESTES 		(1)
UTERUS 		(1)
XRN.ip

Sense strand
CTTTCCACTGGGTATTGAGATTGGCGAGGGGAGAGGCGCAGAAACGGCGTGTAAGAGAGCCTGACTACCAATTGGAATAAGTTTCCCTCCTGACTGTTCACATGTACAGGCAGCATTAGCATTTCCTGCCTGTACATGTGAACGTTCCTATGCTCTACCCCTCGAAGATCCTGATTCAGTAGATCTGGGGTGGGACCTCATGAAACGGCGTCTCCCTCTGTTGTCCAGACTCTAGTGCAGTGGTTCAATCTCGGCTCACTGCAACCTCCGCCTCCCCG
..................................................((.((.(((...((((.((....))....))))...))))).)).((((((((((((((((((............)))))))))))))))))).......................................................................................................................................
..................................................51..................................................................................................151.............................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR189782SRR040024(GSM532909)
G613N. (cervix)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR189787SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		TAX577742(Rovira)
total RNA. (breast)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR189786SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR191409(GSM715519)
19genomic small RNA (size selected RNA from t. (breast)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR191420(GSM715530)
122genomic small RNA (size selected RNA from . (breast)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR029124(GSM416753)
HeLa. (hela)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR037936(GSM510474)
293cand1. (cell line)		TAX577580(Rovira)
total RNA. (breast)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577588(Rovira)
total RNA. (breast)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)		TAX577746(Rovira)
total RNA. (breast)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR191613(GSM715723)
66genomic small RNA (size selected RNA from t. (breast)		SRR191435(GSM715545)
172genomic small RNA (size selected RNA from . (breast)		SRR040037(GSM532922)
G243T. (cervix)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR029129(GSM416758)
SW480. (cell line)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		GSM359192(GSM359192)
HepG2_3pM_6. (cell line)		SRR037943(GSM510481)
293DcrTN. (cell line)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191608(GSM715718)
193genomic small RNA (size selected RNA from . (breast)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191611(GSM715721)
57genomic small RNA (size selected RNA from t. (breast)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR189785SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR038858(GSM458541)
MEL202. (cell line)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577741(Rovira)
total RNA. (breast)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191597(GSM715707)
75genomic small RNA (size selected RNA from t. (breast)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR038859(GSM458542)
MM386. (cell line)		SRR040006(GSM532891)
G601N. (cervix)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR553576(SRX182782)
source: Testis. (testes)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR029130(GSM416759)
DLD2. (cell line)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029132(GSM416761)
MB-MDA231. (cell line)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		TAX577744(Rovira)
total RNA. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		TAX577738(Rovira)
total RNA. (breast)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR191601(GSM715711)
58genomic small RNA (size selected RNA from t. (breast)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191615(GSM715725)
94genomic small RNA (size selected RNA from t. (breast)		SRR191430(GSM715540)
167genomic small RNA (size selected RNA from . (breast)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR029125(GSM416754)
U2OS. (cell line)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
.............................................................................................................................CTGCCTGTACATGTGAACGTTC...................................................................................................................................22143.0043.00-8.001.00--3.001.00-4.001.00-1.00----2.00--2.001.00-1.00--1.002.00-1.00-1.00-1.001.001.00-----1.00---1.00------1.00-1.00---------------------------------------1.00-1.00----1.00--1.001.00----------1.00-------------
.............................................................................................................................CTGCCTGTACATGTGAACGTT....................................................................................................................................21137.0037.00--1.00-2.004.00-4.001.001.00-3.00-------1.00-1.001.00-------1.00-1.00-1.001.001.00-1.00------2.00---1.00----1.00----1.00----1.00--1.00--1.00--------------------1.00-----1.00----------------------1.00-1.00------
.............................................................................................................................CTGCCTGTACATGTGAACGC.....................................................................................................................................20113.001.00--5.00----2.00---1.00---2.00----1.00--------------------------------------------------------------1.00---------------------------------1.00-----------
.............................................................................................................................CTGCCTGTACATGTGAACGTTT...................................................................................................................................2219.0037.00-2.00----4.00--------------------------------------------------------------------------1.00--------1.00------------------------------1.00-------
.............................................................................................................................CTGCCTGTACATGTGAACGT.....................................................................................................................................2017.007.00---------2.001.00----------1.00----------------------------------------------1.00---------1.00----------------------------------------1.00---------
.........................................................................................CTGACTGTTCACATGTACAGGC.......................................................................................................................................................................2217.007.005.00---1.00-------------1.00--------------------------------------------------------------------------------------------------------------
.............................................................................................................................CTGCCTGTACATGTGAACGCT....................................................................................................................................2115.001.00--------1.00----------------2.00-----------1.00-1.00-----------------------------------------------------------------------------------------
............................................................................................ACTGTTCACATGTACAGGCAGC....................................................................................................................................................................2215.005.00------------1.00-------------------------------------------1.00--------------------------------------------1.00---------1.00--1.00--------------
.............................................................................................................................CTGCCTGTACATGTGAACGTTCC..................................................................................................................................2314.004.00------------------------1.00-----------------------1.00-------------------------------------------------1.00------1.00-----------------------
...............................................................................................GTTCACATGTACAGGCAGCAT..................................................................................................................................................................2114.004.003.00-----------------1.00--------------------------------------------------------------------------------------------------------------
..............................................................................................................................TGCCTGTACATGTGAACGTTC...................................................................................................................................2114.004.00--------------------1.00------1.00--------------1.00----------------------------1.00---------------------------------------------------------
.............................................................................................CTGTTCACATGTACAGGCAGC....................................................................................................................................................................2114.004.004.00--------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................CTGCCTGTACATGTGAACGTTA...................................................................................................................................2213.0037.00----------------------------------------------------------------------------1.001.00----------------------------------1.00----------------
.........................................................................................................................TTTCCTGCCTGTACATGTGA.........................................................................................................................................2013.003.00-----------------------------3.00---------------------------------------------------------------------------------------------------
.............................................................................................................................CTGCCTGTACATGTGAACGCC....................................................................................................................................2113.001.00----1.001.00----1.00----------------------------------------------------------------------------------------------------------------------
...............................................................................................GTTCACATGTACAGGCAGT....................................................................................................................................................................1923.000.503.00--------------------------------------------------------------------------------------------------------------------------------
............................................................................................ACTGTTCACATGTACAGGCAGCA...................................................................................................................................................................2313.003.00-------------------------------------------2.00------------------------------------1.00------------------------------------------------
............................................................................................ACTGTTCACATGTACAGGCAG.....................................................................................................................................................................2113.003.00----------------1.00-1.00-------------------------------1.00------------------------------------------------------------------------------
............................GGGAGAGGCGCAGAAACG........................................................................................................................................................................................................................................1813.003.00-----------------------3.00---------------------------------------------------------------------------------------------------------
.............................................................................................................................CTGCCTGTACATGTGAAC.......................................................................................................................................1821.001.00-----------------1.00---------------------------------------------------------------------------------------------------------------
..........................................................................................TGACTGTTCACATGTACAGGCAG.....................................................................................................................................................................2312.002.00----2.00----------------------------------------------------------------------------------------------------------------------------
...............................................................................................GTTCACATGTACAGGCAGCA...................................................................................................................................................................2012.002.00-------------1.00----------------------------------1.00--------------------------------------------------------------------------------
........................................................................................................................ATTTCCTGCCTGTACATGTGAA........................................................................................................................................2212.002.00-2.00-------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................GGCTCACTGCAACCTCCGCCTATA..242.000.00-------------------------------2.00-------------------------------------------------------------------------------------------------
.......................................AGAAACGGCGTGTAAGAG.............................................................................................................................................................................................................................1812.002.00---------1.00---------------------------------------------1.00-------------------------------------------------------------------------
..........................................................................................TGACTGTTCACATGTACAGGC.......................................................................................................................................................................2112.002.00---------------1.00-----------1.00-----------------------------------------------------------------------------------------------------
................................................................................................................................CCTGTACATGTGAACGTTCCT.................................................................................................................................2112.002.00--------------------------------------------------------------1.00-------------------------------------------------------------1.00----
............................................................................................................................CCTGCCTGTACATGTGAACGT.....................................................................................................................................2112.002.00-1.00---------------------------------1.00---------------------------------------------------------------------------------------------
..............................................................................................................................................................................................TGGGACCTCATGAAACGG......................................................................1812.002.00----1.00------------------------------------------------------------------------------------------------------------1.00---------------
..........................................AACGGCGTGTAAGAGAGC..........................................................................................................................................................................................................................1812.002.00-----------------------------------------------2.00---------------------------------------------------------------------------------
...............................................................................................GTTCACATGTACAGGCAG.....................................................................................................................................................................1820.500.500.50--------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................TGCCTGTACATGTGAACGC.....................................................................................................................................191.000.00-------------------------------------------------------------------------------------------------------------1.00-------------------
.............ATTGAGATTGGCGAGGGG.......................................................................................................................................................................................................................................................1811.001.00--------------------------1.00------------------------------------------------------------------------------------------------------
.....................TGGCGAGGGGAGAGGCGCA..............................................................................................................................................................................................................................................1911.001.00----------------------------------------------------------1.00----------------------------------------------------------------------
..........................................................................................................................TTCCTGCCTGTACATGTGA.........................................................................................................................................1911.001.00----1.00----------------------------------------------------------------------------------------------------------------------------
...........................................................................................GACTGTTCACATGTACAGGCA......................................................................................................................................................................2111.001.00--------------------------------------------------------------------------------------------------------------------1.00------------
......................................................................................CTCCTGACTGTTCACATG..............................................................................................................................................................................1811.001.00----------------------------------------------------------------------------------------------------------1.00----------------------
.............................................................................................................................CTGCCTGTACATGTGAACGCCA...................................................................................................................................2211.001.00--------1.00------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................TCGGCTCACTGCAACCTCCGCCAGGG..261.000.00---1.00-----------------------------------------------------------------------------------------------------------------------------
..........................................................GCCTGACTACCAATTGGA..........................................................................................................................................................................................................1811.001.00-----------------1.00---------------------------------------------------------------------------------------------------------------
........................CGAGGGGAGAGGCGCAG.............................................................................................................................................................................................................................................1711.001.00---------------------------1.00-----------------------------------------------------------------------------------------------------
............................................................CTGACTACCAATTGGAATAAG.....................................................................................................................................................................................................2111.001.00--1.00------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................ATCTCGGCTCACTGCAACCTCCGGCG.....261.000.00--------------1.00------------------------------------------------------------------------------------------------------------------
................................................GTGTAAGAGAGCCTGACTAC..................................................................................................................................................................................................................2011.001.00--1.00------------------------------------------------------------------------------------------------------------------------------
.............ATTGAGATTGGCGAGGG........................................................................................................................................................................................................................................................1711.001.00------------------------------------------------------------------------------------------------1.00--------------------------------
.......................................................................................................................................................................................................................................................ATCTCGGCTCACTGCAACCTCCGCCTCATAC311.000.00---1.00-----------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................CTGCCTGTACATGTGAACGCA....................................................................................................................................2111.001.00----------------------------------------------------------------------------------------------------------------------1.00----------
.................................................................................................................................................................................................................................CAGACTCTAGTGCAGAT....................................171.000.00-----------1.00---------------------------------------------------------------------------------------------------------------------
...............................................................................................GTTCACATGTACAGGCAGCATC.................................................................................................................................................................2211.004.00-------------------------------------1.00-------------------------------------------------------------------------------------------
...............................................................................................GTTCACATGTACAGGCAGCATCAGC..............................................................................................................................................................2511.004.00----------------------------------------------1.00----------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................TTCAATCTCGGCTCACTGCAACCCTG.........261.000.00---------------------------------------------------------------------------------------1.00-----------------------------------------
.......................................................................................................................................................................................................................................................ATCTCGGCTCACTGCAACCTCCGCCGCG...281.000.00--------------1.00------------------------------------------------------------------------------------------------------------------
.............................................................................................................................CTGCCTGTACATGTGAACGTTAA..................................................................................................................................2311.0037.00---------1.00-----------------------------------------------------------------------------------------------------------------------
............................................................................................ACTGTTCACATGTACAGGCAGCAAT.................................................................................................................................................................2511.003.00----------------------------------------------------------------------------------------------1.00----------------------------------
...................................................................................................................................................................................................................................................................TGCAACCTCCGCCTCCCCCAAG221.000.00---1.00-----------------------------------------------------------------------------------------------------------------------------
......ACTGGGTATTGAGATTGGCGAG..........................................................................................................................................................................................................................................................2211.001.00----------------------------------------------------------------------------------------1.00----------------------------------------
......ACTGGGTATTGAGATTGGCG............................................................................................................................................................................................................................................................2011.001.00-------------------------------------------------------------------------1.00-------------------------------------------------------
......................................................................................................................................................................................................................................................AATCTCGGCTCACTGCAACCTCCGCCCTGG..301.000.00--------------1.00------------------------------------------------------------------------------------------------------------------
............................................................................................ACTGTTCACATGTACAGGCAGCAT..................................................................................................................................................................2411.001.00---------------------------------------------------------------------1.00-----------------------------------------------------------
.........................................................................................................................................................................................................................................AGTGCAGTGGTTCAATTGGT.........................201.000.00----------------------------1.00----------------------------------------------------------------------------------------------------
.....................................................AGAGAGCCTGACTACCAATTGGAAT........................................................................................................................................................................................................2511.001.00----------1.00----------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................TCTCGGCTCACTGCAACCTCCGCCAGGG..281.000.00---1.00-----------------------------------------------------------------------------------------------------------------------------
..............................................................................................TGTTCACATGTACAGGCAGC....................................................................................................................................................................2011.001.00-------------------------------------------------------------------------------------1.00-------------------------------------------
..........GGTATTGAGATTGGCGAGGGGAGA....................................................................................................................................................................................................................................................2411.001.00-------------1.00-------------------------------------------------------------------------------------------------------------------
....CCACTGGGTATTGAGATTGGCGT...........................................................................................................................................................................................................................................................231.000.00---------------------------------1.00-----------------------------------------------------------------------------------------------
................................................................................................................................CCTGTACATGTGAACGTTCCTTTTT.............................................................................................................................2511.002.00----------1.00----------------------------------------------------------------------------------------------------------------------
.............................................................................................................................CTGCCTGTACATGTGAACGGT....................................................................................................................................2111.001.00-------1.00-------------------------------------------------------------------------------------------------------------------------
.................................................................................TTTCCCTCCTGACTGTTCACATGTACAGGC.......................................................................................................................................................................3011.001.00----1.00----------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................CTGCCTGTACATGTGAACGCCGA..................................................................................................................................2311.001.00--------------------------------------1.00------------------------------------------------------------------------------------------
.............................................................................................................................CTGCCTGTACATGTGAACG......................................................................................................................................1911.001.00---------------------------------------------------------------------------1.00-----------------------------------------------------
.....................................GCAGAAACGGCGTGTAAGA..............................................................................................................................................................................................................................1911.001.00-----------------1.00---------------------------------------------------------------------------------------------------------------
.......................................................................................TCCTGACTGTTCACATG..............................................................................................................................................................................1711.001.00------1.00--------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................TCAATCTCGGCTCACTGCAACAGA..........241.000.00---------------------------------------------------------------------------------------------------------------------------1.00-----
......................................................................................................................................................................................................................................................AATCTCGGCTCACTGCAACCTCCGCCGGGG..301.000.00---1.00-----------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................CGGCTCACTGCAACCTCCGCCGGGG..251.000.00---1.00-----------------------------------------------------------------------------------------------------------------------------
.....................TGGCGAGGGGAGAGGCGC...............................................................................................................................................................................................................................................1811.001.00------------------------------------------------------------1.00--------------------------------------------------------------------
.............................................................................................................................CTGCCTGTACATGTGAACGTTCT..................................................................................................................................2311.0043.00----------------------------------------------------1.00----------------------------------------------------------------------------
............................................................................................ACTGTTCACATGTACAGGCAGTAA..................................................................................................................................................................2411.003.00--------------------------------------------------------------------------------------------1.00------------------------------------
..........................................................................................................................................................................................................................................................TCGGCTCACTGCAACCTCCGCCTAGG..261.000.00-1.00-------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................TCAATCTCGGCTCACTGC................1801.001.00-------------1.00-------------------------------------------------------------------------------------------------------------------
.................................................................................................................................CTGTACATGTGAACGTTCCTATGCTCTAC........................................................................................................................2911.001.00-------------------------------------------------------------1.00-------------------------------------------------------------------
............................................................................................ACTGTTCACATGTACAGGCA......................................................................................................................................................................2011.001.00-------------------------------------------------------------------------------1.00-------------------------------------------------
...................................................................................................................................GTACATGTGAACGTTCCT.................................................................................................................................1811.001.00----------------------------------------------------------------------------------1.00----------------------------------------------
..............TTGAGATTGGCGAGGGGAG.....................................................................................................................................................................................................................................................1911.001.00------1.00--------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................ACTGCAACCTCCGCCTCCCCGACTC251.000.00--------------1.00------------------------------------------------------------------------------------------------------------------
.............................................................................................................................CTGCCTGTACATGTGAACGCTT...................................................................................................................................2211.001.00------------------------1.00--------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................ATCTCGGCTCACTGCAACCTCCGCCGGGG..291.000.00---1.00-----------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................TCGGCTCACTGCAACCTCCGCCGGGG..261.000.00---1.00-----------------------------------------------------------------------------------------------------------------------------
...........................................................................................GACTGTTCACATGTACAGGCAG.....................................................................................................................................................................2211.001.00--------------------------------------------------------------------------------------1.00------------------------------------------
...........................................................................................................................................................................................................................GTTGTCCAGACTCTAGTGC........................................1911.001.00--1.00------------------------------------------------------------------------------------------------------------------------------
...............................................................................................GTTCACATGTACAGGCAGCACTG................................................................................................................................................................2311.002.00-------1.00-------------------------------------------------------------------------------------------------------------------------
.TTTCCACTGGGTATTGAGATTGG..............................................................................................................................................................................................................................................................2311.001.00----------------------------------------1.00----------------------------------------------------------------------------------------
.......................GCGAGGGGAGAGGCGCAG.............................................................................................................................................................................................................................................1811.001.00---------------------1.00-----------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................TCCAGACTCTAGTGCTAGA....................................191.000.00----------1.00----------------------------------------------------------------------------------------------------------------------
.....................................GCAGAAACGGCGTGTAAGAGAGCCTGA......................................................................................................................................................................................................................2711.001.00--------------------------------------------1.00------------------------------------------------------------------------------------
..........................................................................................................................TTCCTGCCTGTACATGTGAACC......................................................................................................................................221.000.00----1.00----------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................TCCTGCCTGTACATGTGAAC.......................................................................................................................................2011.001.00-----1.00---------------------------------------------------------------------------------------------------------------------------
..............................................................................................TGTTCACATGTACAGGCAGCA...................................................................................................................................................................2111.001.00------------------------------------------------------------------------------------------------------------1.00--------------------
.......................................................................................................................................................................................................................................................ATCTCGGCTCACTGCAACCTCCGCCTCACTG311.000.00--------------1.00------------------------------------------------------------------------------------------------------------------
...............................................................................................GTTCACATGTACAGGCAGCATTAG...............................................................................................................................................................2411.001.00----------------------------1.00----------------------------------------------------------------------------------------------------
.............................................................................................................................CTGCCTGTACATGTGAACTTA....................................................................................................................................2121.001.00-1.00-------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................ATCTCGGCTCACTGCAACCTCCGCGGGC...281.000.00---1.00-----------------------------------------------------------------------------------------------------------------------------
........TGGGTATTGAGATTGGCGAGGGGAGA....................................................................................................................................................................................................................................................2611.001.00------------------------------------------------------------------------------------------------------1.00--------------------------
..................................................................................................................................................................................GTAGATCTGGGGTGGGACCTC...............................................................................2111.001.00---------------------------------------1.00-----------------------------------------------------------------------------------------
.............................................................................................................................CTGCCTGTACATGTGAACGG.....................................................................................................................................2011.001.00------------------------------1.00--------------------------------------------------------------------------------------------------
................................................................................................................................................................................CAGTAGATCTGGGGTGCG....................................................................................181.000.00----------------1.00----------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................TCTCGGCTCACTGCAACCTCCGCCTCCCCCC311.000.00---1.00-----------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................CCTGATTCAGTAGATCTGGGG........................................................................................2120.500.50--0.50------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................ACCTCATGAAACGGC.....................................................................1520.500.50-----------0.50---------------------------------------------------------------------------------------------------------------------
..................................................GTAAGAGAGCCTGAC.....................................................................................................................................................................................................................1520.500.50-------------------0.50-------------------------------------------------------------------------------------------------------------
...................ATTGGCGAGGGGAGA....................................................................................................................................................................................................................................................1530.330.33-------------------------------------------------------------------------------------------------------------------------------0.33-
.....................TGGCGAGGGGAGAGGC.................................................................................................................................................................................................................................................1630.330.33--------------------------------------------------------------------------------------------------------------------------------0.33

Antisense strand
CTTTCCACTGGGTATTGAGATTGGCGAGGGGAGAGGCGCAGAAACGGCGTGTAAGAGAGCCTGACTACCAATTGGAATAAGTTTCCCTCCTGACTGTTCACATGTACAGGCAGCATTAGCATTTCCTGCCTGTACATGTGAACGTTCCTATGCTCTACCCCTCGAAGATCCTGATTCAGTAGATCTGGGGTGGGACCTCATGAAACGGCGTCTCCCTCTGTTGTCCAGACTCTAGTGCAGTGGTTCAATCTCGGCTCACTGCAACCTCCGCCTCCCCG
..................................................((.((.(((...((((.((....))....))))...))))).)).((((((((((((((((((............)))))))))))))))))).......................................................................................................................................
..................................................51..................................................................................................151.............................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR189782SRR040024(GSM532909)
G613N. (cervix)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR189787SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		TAX577742(Rovira)
total RNA. (breast)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR189786SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR191409(GSM715519)
19genomic small RNA (size selected RNA from t. (breast)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR191420(GSM715530)
122genomic small RNA (size selected RNA from . (breast)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR029124(GSM416753)
HeLa. (hela)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR037936(GSM510474)
293cand1. (cell line)		TAX577580(Rovira)
total RNA. (breast)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577588(Rovira)
total RNA. (breast)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)		TAX577746(Rovira)
total RNA. (breast)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR191613(GSM715723)
66genomic small RNA (size selected RNA from t. (breast)		SRR191435(GSM715545)
172genomic small RNA (size selected RNA from . (breast)		SRR040037(GSM532922)
G243T. (cervix)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR029129(GSM416758)
SW480. (cell line)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		GSM359192(GSM359192)
HepG2_3pM_6. (cell line)		SRR037943(GSM510481)
293DcrTN. (cell line)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191608(GSM715718)
193genomic small RNA (size selected RNA from . (breast)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191611(GSM715721)
57genomic small RNA (size selected RNA from t. (breast)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR189785SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR038858(GSM458541)
MEL202. (cell line)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577741(Rovira)
total RNA. (breast)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191597(GSM715707)
75genomic small RNA (size selected RNA from t. (breast)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR038859(GSM458542)
MM386. (cell line)		SRR040006(GSM532891)
G601N. (cervix)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR553576(SRX182782)
source: Testis. (testes)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR029130(GSM416759)
DLD2. (cell line)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029132(GSM416761)
MB-MDA231. (cell line)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		TAX577744(Rovira)
total RNA. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		TAX577738(Rovira)
total RNA. (breast)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR191601(GSM715711)
58genomic small RNA (size selected RNA from t. (breast)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191615(GSM715725)
94genomic small RNA (size selected RNA from t. (breast)		SRR191430(GSM715540)
167genomic small RNA (size selected RNA from . (breast)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR029125(GSM416754)
U2OS. (cell line)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
............................................................................................CTGCCTGTACATGTGAACAGT..................................................................................................................................................................... 2113.003.00------1.00-----1.00--1.00-----------------------------------------------------------------------------------------------------------------
.............................................................................................................................CTGCCTGTACATGTGAACT...................................................................................................................................... 1923.001.003.00--------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................CTGGACAACAGAGGGAGACGCCGT.................................................. 2412.002.00-----------------------------------------2.00---------------------------------------------------------------------------------------
...............................................................................................CTGCCTGTACATGTGAAC..................................................................................................................................................................... 1821.001.00-----------------1.00---------------------------------------------------------------------------------------------------------------
...........................................................................................CTGCCTGTACATGTGAACAGTC..................................................................................................................................................................... 2212.002.00------------1.00---------1.00----------------------------------------------------------------------------------------------------------
............................................................................................................................GTTCACATGTACAGGCAGG....................................................................................................................................... 1912.002.002.00--------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................GTTCACATGTACAGGCAG....................................................................................................................................... 1820.500.500.50--------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................TTCCTGCCTGTACATGTGAACGT..................................................................................................................................... 231.000.00----------------------------------------------1.00----------------------------------------------------------------------------------
.............................................................................................................................................................................................................TGGACAACAGAGGGAGACGCCG................................................... 2211.001.00----------1.00----------------------------------------------------------------------------------------------------------------------
................................................................................................................................................AGGGGTAGAGCATAGGAA.................................................................................................................... 1811.001.00---------------------------------------------------------1.00-----------------------------------------------------------------------
.............................................................................GAACAGTCAGGAGGGAAACTTA................................................................................................................................................................................... 2211.001.00-----------------------------------------------------------------------------------------1.00---------------------------------------
..............................................................................................CTGCCTGTACATGTGAACA..................................................................................................................................................................... 1911.001.00------------------------------------1.00--------------------------------------------------------------------------------------------
..........................................................................................................................................................................CTGATTCAGTAGATCTGGGGTAATA................................................................................... 251.000.00-------------------------------1.00-------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................TCTCCCTCTGTTGTCCAGTA................................................ 201.000.00-----------------------------------------------------------------1.00---------------------------------------------------------------
....................................................................................................................................................................................................................TAGAGTCTGGACAACAGAGGGA............................................ 2211.001.00--1.00------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................TGCACTAGAGTCTGGACAAC....................................... 2011.001.00-----------------------------------------------------------------------------------------------------------1.00---------------------
.................................................................................................................................................TCCTATGCTCTACCCCTGT.................................................................................................................. 191.000.00------------------------------------------1.00--------------------------------------------------------------------------------------
.................................................................................................................................................AGGGGTAGAGCATAGGA.................................................................................................................... 1711.001.00---------------------------------------------------------------1.00-----------------------------------------------------------------
...........................................................................................................................TCCTGCCTGTACATGTGAACGT..................................................................................................................................... 221.000.00------------1.00--------------------------------------------------------------------------------------------------------------------
..............................................................................................................................AACGTTCACATGTACAGGCA.................................................................................................................................... 2011.001.00------------------1.00--------------------------------------------------------------------------------------------------------------
.................................................................................................................................................TCCTATGCTCTACCCCTCTTT................................................................................................................ 211.000.00--------------------------------------------------------------------------1.00------------------------------------------------------
.....................................................................................................................................................ATGCTCTACCCCTCGGAG............................................................................................................... 181.000.00--------------------------------1.00------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................CAACCTCCGCCTCCCCGGGC 201.000.00------------------------------------------------------------------------1.00--------------------------------------------------------
...........................................................................................................................GTTCACATGTACAGGCAGGA....................................................................................................................................... 2011.001.00------------------------------------------------------------------------------------1.00--------------------------------------------
..........................................................................................................................TTCCTGCCTGTACATGTGAACGG..................................................................................................................................... 231.000.00------------1.00--------------------------------------------------------------------------------------------------------------------
............................................................................................................................AACGTTCACATGTACAGGCAGG.................................................................................................................................... 2211.001.00--------------------------------------------------------------------------------------------------------------1.00------------------
...............................................................................................ATGCTGCCTGTACATGTGAAC.................................................................................................................................................................. 2111.001.00------------------------1.00--------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................CTGGACAACAGAGGGAGACGCC.................................................. 2221.001.00----------0.50-------------------------------------------------------------------------------------------------------------------0.50--
............................................................................................ACTGTTCACATGTACAGGCAGA.................................................................................................................................................................... 2211.000.00---------1.00-----------------------------------------------------------------------------------------------------------------------
....................................................................................CCTGTACATGTGAACAGTCAGGAGGG........................................................................................................................................................................ 2611.001.00-------------1.00-------------------------------------------------------------------------------------------------------------------
...........................................................................................................................AACGTTCACATGTACAGGCAGGA.................................................................................................................................... 2311.001.00------------------------------------------------------------------1.00--------------------------------------------------------------
..........................................................................................................................GTTCACATGTACAGGCAGGAA....................................................................................................................................... 2111.001.00-------------1.00-------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................CTAGAGTCTGGACAACAGAGG........................................... 2111.001.00---------------------------------------------------------------------------------------------------1.00-----------------------------
......................................................................................................................................GCATAGGAACGTTCACATG............................................................................................................................. 1911.001.00-----------------------------------------------------------------------------------------------------------------------------1.00---
...............................................................................................GTTCACATGTACAGGCAGTTA.................................................................................................................................................................. 2121.000.50-1.00-------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................CTGGACAACAGAGGGAGACG.................................................. 2030.330.33--0.33------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................GGTAGAGCATAGGAA....................................................................................................................... 1550.200.20--------------------0.20------------------------------------------------------------------------------------------------------------