| (2) B-CELL | (2) BREAST | (9) CELL-LINE | (3) HEART | (2) HELA | (3) LIVER | (1) OTHER | (6) SKIN | (1) TESTES | (2) XRN.ip |
| TCAGTATGGTAATGAAGAACAGAGAAAACAGGCTTTTGAAGAATTGCGAGGTATTTATTACATACTAAAGATTATGTTATCATTTGCAATAAGTCACTTGTTTTCTCTTAAAATACCCAAGACTGTCCTAGAAAACAATTTTTGTTTAGGTTTGTCTTCTCCAGATCCTTTTTTGTTTTTATTTTTTCCTTGCCTGGGACAAATTTCCTCCCTTTGTTTCCAGAGAACTGAAATGAGATCTGAAGTCACTGTAATGTATTTTTGTTTTTCAGATGATTTGGTTGAGTTAAGTAAAGCCAAATATTCGAGAAATATTGTTAAG ................................................................................................................................................................................(((((((((....((..((((((((((.........)))))).)))).))...))))))))).((((((..((..............)).)))))).................................................. ...........................................................................................................................................................................172.................................................................................................272................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR189784 | SRR189785 | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR033721(GSM497066) Ly3 cell line (Ly3). (B cell) | SRR330908(SRX091746) tissue: normal skindisease state: normal. (skin) | SRR553572(SRX182778) source: Frontal Cortex. (Frontal Cortex) | SRR191607(GSM715717) 192genomic small RNA (size selected RNA from . (breast) | SRR330923(SRX091761) tissue: normal skindisease state: normal. (skin) | SRR039625(GSM531988) HBV(-) HCV(-) HCC Tissue Sample. (liver) | SRR191613(GSM715723) 66genomic small RNA (size selected RNA from t. (breast) | SRR330882(SRX091720) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330903(SRX091741) tissue: skin psoriatic uninvolveddisease stat. (skin) | GSM1105753INPUT(GSM1105753) small RNA sequencing data. (hela) | SRR330911(SRX091749) tissue: normal skindisease state: normal. (skin) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR038861(GSM458544) MM466. (cell line) | GSM359178(GSM359178) hela_nucl_t. (hela) | SRR033713(GSM497058) Burkitt Lymphoma (BL115). (B cell) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR553576(SRX182782) source: Testis. (testes) | SRR060168(GSM565978) 5-8F_nucleus. (cell line) | SRR039622(GSM531985) HCV(+) Adjacent Tissue Sample. (liver) | SRR326280(GSM769510) total cell content of unperturbed cells was s. (cell line) | SRR330866(SRX091704) tissue: skin psoriatic involveddisease state:. (skin) | SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR207119(GSM721081) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver) | SRR342899(SRX096795) small RNA seq of Left atrial tissue. (heart) | SRR342900(SRX096796) small RNA seq of Right atrial tissue. (heart) | SRR343335 | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR342895(SRX096791) small RNA seq of Left atrial tissue. (heart) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ................................................................................................................................................................................TTTTATTTTTTCCTTGCACTG............................................................................................................................. | 21 | 36.00 | 0.00 | 21.00 | 15.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................................................................................TTTATTTTTTCCTTGCACTG............................................................................................................................. | 20 | 27.00 | 0.00 | 20.00 | 6.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................................................................................CTGAAGTCACTGTAATGT................................................................. | 18 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................ATCCTTTTTTGTTTTTATTTCCAG...................................................................................................................................... | 24 | 2.00 | 0.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....ATGGTAATGAAGAACAGAGA......................................................................................................................................................................................................................................................................................................... | 20 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................AAATGAGATCTGAAGTCACT........................................................................ | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...........ATGAAGAACAGAGAAAACAGGCTTTTGAAGA........................................................................................................................................................................................................................................................................................ | 31 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........TAATGAAGAACAGAGAAAACA.................................................................................................................................................................................................................................................................................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................AGAACTGAAATGAGATCTGAAGT............................................................................ | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......GGTAATGAAGAACAGAGA......................................................................................................................................................................................................................................................................................................... | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............AAGAACAGAGAAAACAGGCTTTTGAAGAATTGCG.................................................................................................................................................................................................................................................................................. | 34 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............AAGAACAGAGAAAACAGGC................................................................................................................................................................................................................................................................................................. | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................................CTGAAGTCACTGTAATG.................................................................. | 17 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................................................ATGTATTTTTGTTTTTACC.................................................. | 19 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........GTAATGAAGAACAGAGACAAC..................................................................................................................................................................................................................................................................................................... | 21 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................TTATCATTTGCAATACTTG................................................................................................................................................................................................................................... | 19 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................................................................................TTTATTTTTTCCTTGCACGT............................................................................................................................. | 20 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........TAATGAAGAACAGAGAAAACAGGCTTTTGAAGA........................................................................................................................................................................................................................................................................................ | 33 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................TCCTTTTTTGTTTTTAGCTG......................................................................................................................................... | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | |
| .................................................................................................................................................................................................................................................................................TGATTTGGTTGAGTTGCG............................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........AATGAAGAACAGAGAAAACAGGCT................................................................................................................................................................................................................................................................................................ | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...GTATGGTAATGAAGAACAGAGAAAACAGGC................................................................................................................................................................................................................................................................................................. | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ..................................................................................................................................................................................TTATTTTTTCCTTGCACTG............................................................................................................................. | 19 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...GTATGGTAATGAAGAACAGAGAAAACAG................................................................................................................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............GAAGAACAGAGAAAACAGGCTTTTGAAGAA....................................................................................................................................................................................................................................................................................... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................TTTTATTTTTTCCTTGCACTA............................................................................................................................. | 21 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......TGGTAATGAAGAACAGAGAAAACAGGC................................................................................................................................................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................GAATTGCGAGGTATTTATTACATACT................................................................................................................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................ATACTAAAGATTATGTTA................................................................................................................................................................................................................................................... | 18 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - |
| ..AGTATGGTAATGAAGAACA............................................................................................................................................................................................................................................................................................................. | 19 | 2 | 0.50 | 0.50 | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............AAGAACAGAGAAAACAGG.................................................................................................................................................................................................................................................................................................. | 18 | 3 | 0.33 | 0.33 | - | - | - | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................AAGACTGTCCTAGAAAAC.......................................................................................................................................................................................... | 18 | 3 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.33 | - | - | - |
| ...........ATGAAGAACAGAGAAAAC..................................................................................................................................................................................................................................................................................................... | 18 | 4 | 0.25 | 0.25 | - | - | - | 0.25 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| TCAGTATGGTAATGAAGAACAGAGAAAACAGGCTTTTGAAGAATTGCGAGGTATTTATTACATACTAAAGATTATGTTATCATTTGCAATAAGTCACTTGTTTTCTCTTAAAATACCCAAGACTGTCCTAGAAAACAATTTTTGTTTAGGTTTGTCTTCTCCAGATCCTTTTTTGTTTTTATTTTTTCCTTGCCTGGGACAAATTTCCTCCCTTTGTTTCCAGAGAACTGAAATGAGATCTGAAGTCACTGTAATGTATTTTTGTTTTTCAGATGATTTGGTTGAGTTAAGTAAAGCCAAATATTCGAGAAATATTGTTAAG ................................................................................................................................................................................(((((((((....((..((((((((((.........)))))).)))).))...))))))))).((((((..((..............)).)))))).................................................. ...........................................................................................................................................................................172.................................................................................................272................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR189784 | SRR189785 | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR033721(GSM497066) Ly3 cell line (Ly3). (B cell) | SRR330908(SRX091746) tissue: normal skindisease state: normal. (skin) | SRR553572(SRX182778) source: Frontal Cortex. (Frontal Cortex) | SRR191607(GSM715717) 192genomic small RNA (size selected RNA from . (breast) | SRR330923(SRX091761) tissue: normal skindisease state: normal. (skin) | SRR039625(GSM531988) HBV(-) HCV(-) HCC Tissue Sample. (liver) | SRR191613(GSM715723) 66genomic small RNA (size selected RNA from t. (breast) | SRR330882(SRX091720) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330903(SRX091741) tissue: skin psoriatic uninvolveddisease stat. (skin) | GSM1105753INPUT(GSM1105753) small RNA sequencing data. (hela) | SRR330911(SRX091749) tissue: normal skindisease state: normal. (skin) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR038861(GSM458544) MM466. (cell line) | GSM359178(GSM359178) hela_nucl_t. (hela) | SRR033713(GSM497058) Burkitt Lymphoma (BL115). (B cell) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR553576(SRX182782) source: Testis. (testes) | SRR060168(GSM565978) 5-8F_nucleus. (cell line) | SRR039622(GSM531985) HCV(+) Adjacent Tissue Sample. (liver) | SRR326280(GSM769510) total cell content of unperturbed cells was s. (cell line) | SRR330866(SRX091704) tissue: skin psoriatic involveddisease state:. (skin) | SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR207119(GSM721081) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver) | SRR342899(SRX096795) small RNA seq of Left atrial tissue. (heart) | SRR342900(SRX096796) small RNA seq of Right atrial tissue. (heart) | SRR343335 | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR342895(SRX096791) small RNA seq of Left atrial tissue. (heart) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...............................................................................................................................................................TCCAGATCCTTTTTTTTA................................................................................................................................................. | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................................CTTCTCCAGATCCTTTGC..................................................................................................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................................................................................................................................................TCTCCAGATCCTTTTGAGA.................................................................................................................................................. | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................................CTTCTCCAGATCCTTCT...................................................................................................................................................... | 17 | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................................................................................................TTCTCCAGATCCTTTTTA.................................................................................................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | |
| .........................................................................................................................................................AGGATCTGGAGAAGAC......................................................................................................................................................... | 16 | 5 | 0.60 | 0.60 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.40 | - | - | - | 0.20 |
| ..............................................................................................................................................................................................................................................................................CTCAACCAAATCATCT.................................... | 16 | 3 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.33 | - | - |
| ...........................................................................................................................................................................................................................TCATTTCAGTTCTCTGG...................................................................................... | 17 | 4 | 0.25 | 0.25 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.25 | - |