ID: uc003zab.1_intron_20_0_chr8_145008260_r
GENE: PLEC(11)
chr8:145008210-145008535-


(2)
AGO2.ip
(4)
B-CELL
(3)
BRAIN
(8)
BREAST
(22)
CELL-LINE
(3)
CERVIX
(1)
FIBROBLAST
(7)
HEART
(1)
HELA
(5)
LIVER
(2)
OTHER
(35)
SKIN
(1)
TESTES
(1)
UTERUS
(1)
XRN.ip

Sense strand
CACGTGGCCATCCTGGAGCGGGAGAAGCAGCTCCGCAGCGAGTTTGAGAGGTGGGTGGGGCCCTGTGGTGGCAGGGGAACCACCCGAGGGTGTGTCACTGCCTGGGAAGGAAACCCCCCTCCCCGCCCCGCCCCCGGCGGGGGAACCCAAGCTCCCACTCGCCTTAGGACAGTGGGCCACAGCCAGGGAGACCGGAGCGGGAGGCGAGCTGCAGTCTGTGGCCAGGGCTGTGCCGGACCCGGCCAACGCGGCCCCTTCCCTGTGCTGCTGCTGCAGGCTGGAGTGTCTTCAGCGCATCGTGACCAAGCTGCAGATGGAGGCGGGGC
........................................................................................................................(((((((........))))))).......(((((((.(((((............(((....))).((....))...))))).)).)))))....................................................................................................................
........................................................................................................................121........................................................................................212................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
GSM532876(GSM532876)
G547T. (cervix)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577740(Rovira)
total RNA. (breast)
SRR029128(GSM416757)
H520. (cell line)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
TAX577738(Rovira)
total RNA. (breast)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532877(GSM532877)
G691N. (cervix)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
TAX577580(Rovira)
total RNA. (breast)
SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR189782SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
TAX577741(Rovira)
total RNA. (breast)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038859(GSM458542)
MM386. (cell line)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR191438(GSM715548)
175genomic small RNA (size selected RNA from . (breast)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR038863(GSM458546)
MM603. (cell line)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR040024(GSM532909)
G613N. (cervix)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR038862(GSM458545)
MM472. (cell line)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
TAX577743(Rovira)
total RNA. (breast)
SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
.............................................................................................................................CCCCGCCCCCGGCGGGGGA......................................................................................................................................................................................19168.0068.0038.0030.00--------------------------------------------------------------------------------------------
.............................................................................................................................CCCCGCCCCCGGCGGGGG.......................................................................................................................................................................................18146.0046.0025.0020.00-------------1.00------------------------------------------------------------------------------
..............................................................................................................................CCCGCCCCCGGCGGGG........................................................................................................................................................................................16118.0018.0012.005.00------------------------1.00-------------------------------------------------------------------
.............................................................................................................................CCCCGCCCCCGGCGGGGGG......................................................................................................................................................................................19114.0046.009.005.00--------------------------------------------------------------------------------------------
..............................................................................................................................CCCGCCCCCGGCGGGGA.......................................................................................................................................................................................1717.0018.003.004.00--------------------------------------------------------------------------------------------
..............................................................................................................................................................................................ACCGGAGCGGGAGGCGAG......................................................................................................................1813.003.00--------3.00-------------------------------------------------------------------------------------
.............................................................................................................................CCCCGCCCCCGGCGGGGA.......................................................................................................................................................................................1813.001.002.001.00--------------------------------------------------------------------------------------------
.............................................................................................................................CCCCGCCCCCGGCGGGGGACCG...................................................................................................................................................................................2213.0068.001.002.00--------------------------------------------------------------------------------------------
...............................................................................................................................CCGCCCCCGGCGGGGGGG.....................................................................................................................................................................................182.000.00-2.00--------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................CCAGGGCTGTGCCGGACCCGGCCA.................................................................................2412.002.00----------2.00-----------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................TCGTGACCAAGCTGCAGA............1812.002.00--------------------------------1.00-----------------1.00-------------------------------------------
...................................................................................................................................................................................................................................................................................................GCGCATCGTGACCAAGCT.................1812.002.00---1.00------------------------------------------------------------------------1.00-----------------
...........................................................................................................................................................................................................................................................................................................TGACCAAGCTGCAGATGGAGGCG....2312.002.00------------------------------------------------------1.00--------------1.00------------------------
...........................................................................................................................................................................................................................................................................................................TGACCAAGCTGCAGATG..........1712.002.00------1.00-------------------------------1.00-------------------------------------------------------
..............................................................................................................................CCCGCCCCCGGCGGGGG.......................................................................................................................................................................................1712.002.00-1.00--------------------------------------1.00-----------------------------------------------------
......................................................................................................................................................................................................................TCTGTGGCCAGGGCTGTGCCGGAC........................................................................................2412.002.00-----------------2.00----------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................GCGCATCGTGACCAAGCTGCA..............2111.001.00---1.00------------------------------------------------------------------------------------------
.............TGGAGCGGGAGAAGCAGCT......................................................................................................................................................................................................................................................................................................1911.001.00---------------------------------------1.00------------------------------------------------------
..................................................GTGGGTGGGGCCCTGTGGTGGC..............................................................................................................................................................................................................................................................2211.001.00-------------------------------------------1.00--------------------------------------------------
....................................................................................................................................................................................................................................................................................................CGCATCGTGACCAAGCTGCAGGG...........231.000.00------------------------1.00---------------------------------------------------------------------
.....................................................................................................................CCTCCCCGCCCCGCCCCTCT.............................................................................................................................................................................................201.000.00-----------1.00----------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................CATCGTGACCAAGCTGCAGA............2011.001.00-----------------------------------------1.00----------------------------------------------------
.......................................................................................................................................................................................................................................................................................GGAGTGTCTTCAGCGCATCGTGACC......................2511.001.00--1.00-------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................AAGCTGCAGATGGAGAAAG...191.000.00----1.00-----------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................CATCGTGACCAAGCTGCAGATG..........2211.001.00------------------------------------------------------------------1.00---------------------------
.............................................................................................................................CCCCGCCCCCGGCGGGGAAG.....................................................................................................................................................................................2011.001.001.00---------------------------------------------------------------------------------------------
..........TCCTGGAGCGGGAGAAGCA.........................................................................................................................................................................................................................................................................................................1911.001.00---------------------------------------------------------------1.00------------------------------
........................................................................................................................CCCCGCCCCGCCCCCGGCGCCGC.......................................................................................................................................................................................231.000.00------------------------------1.00---------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................ATCGTGACCAAGCTGCAGATGGAGGCGGG..2911.001.00-----------------------------1.00----------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................GGAGTGTCTTCAGCGCATCGTGA........................2311.001.00---1.00------------------------------------------------------------------------------------------
.............................................................................................................................................................CTCGCCTTAGGACAGTGGGCCAC..................................................................................................................................................2311.001.001.00---------------------------------------------------------------------------------------------
..............................................................................................................................CCCGCCCCCGGCGGGGGCA.....................................................................................................................................................................................1911.002.001.00---------------------------------------------------------------------------------------------
..CGTGGCCATCCTGGAGCGGGA...............................................................................................................................................................................................................................................................................................................2111.001.00-----------1.00----------------------------------------------------------------------------------
.............................................................................................................................CCCCGCCCCCGGCGGGG........................................................................................................................................................................................1711.001.001.00---------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................GCATCGTGACCAAGCTG................1711.001.00--1.00-------------------------------------------------------------------------------------------
...........CCTGGAGCGGGAGAAGT..........................................................................................................................................................................................................................................................................................................171.000.00--------------------------------------------1.00-------------------------------------------------
..........................................................................................................................................................................................GGAGACCGGAGCGGGAGAG.........................................................................................................................191.000.00----------------------------------------------------------------------1.00-----------------------
........................................................................................................................................................................................................................................................................................GAGTGTCTTCAGCGCATCG...........................1911.001.00--1.00-------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................TGACCAAGCTGCAGAT...........1611.001.00-------------------------------------------------------------------1.00--------------------------
......................................................................................................................................................................................................................................................................................................CATCGTGACCAAGCTGCAGATGGAGGC.....2711.001.00------1.00---------------------------------------------------------------------------------------
.............................................................................................................................CCCCGCCCCCGGCGGGGC.......................................................................................................................................................................................1811.001.00----1.00-----------------------------------------------------------------------------------------
.............................................................................................................................CCCCGCCCCCGGCGGGGGAC.....................................................................................................................................................................................2011.0068.00-1.00--------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................GCTGGAGTGTCTTCAGCG................................1811.001.00--1.00-------------------------------------------------------------------------------------------
.............................................................................................................................CCCCGCCCCCGGCGGGGCGGC....................................................................................................................................................................................2111.001.00-1.00--------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................GGCCAGGGCTGTGCCGGACCCGG....................................................................................2311.001.00--------------1.00-------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................CCCGGCCAACGCGGCGGGC......................................................................191.000.00----------------------------1.00-----------------------------------------------------------------
...............................................................................................................................CCGCCCCCGGCGGGGGGGG....................................................................................................................................................................................191.000.00---------------------------------------------1.00------------------------------------------------
.............................................................................................................................CCCCGCCCCCGGCGGGGGAGAG...................................................................................................................................................................................2211.0068.001.00---------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................CCCCTTCCCTGTGCTGCTGCTG.....................................................2211.001.00--------------1.00-------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................AGCGCATCGTGACCAAGCTGCAGATGGA........2811.001.00-------1.00--------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................GGCTGGAGTGTCTTCAGC.................................1811.001.00---------------------------------1.00------------------------------------------------------------
...GTGGCCATCCTGGAGCGGGAGAAGCAGCTC.....................................................................................................................................................................................................................................................................................................3011.001.00-1.00--------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................GGAGTGTCTTCAGCGCATCGTGAC.......................2411.001.00------1.00---------------------------------------------------------------------------------------
.................................................................................................................CCCCCCTCCCCGCCCCGCCAC................................................................................................................................................................................................211.000.00-------------------1.00--------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................CTGGAGTGTCTTCAGCGCATCGTGACCAAGC..................3111.001.00-----------------------------------------------------------------------1.00----------------------
..............................................................................................................................................................................................................................................................................................................CCAAGCTGCAGATGGAGGCGGG..2211.001.00------------------------------------------1.00---------------------------------------------------
.............................................................................................................................CCCCGCCCCCGGCGGGGGGA.....................................................................................................................................................................................2011.0046.00-1.00--------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................TCTGTGGCCAGGGCTGTGCCGGACC.......................................................................................2511.001.00-------------------------------------------------------1.00--------------------------------------
..............................................................................................................................................................................................................AGCTGCAGTCTGTGGAA.......................................................................................................171.000.00----------------------1.00-----------------------------------------------------------------------
..................................................GTGGGTGGGGCCCTGTGGTGGCAGG...........................................................................................................................................................................................................................................................2511.001.00-----------------------------------------------1.00----------------------------------------------
........................................................................................................................CCCCGCCCCGCCCCCGGCGC..........................................................................................................................................................................................201.000.00-------------------1.00--------------------------------------------------------------------------
......................................................................................................................................................................................................................TCTGTGGCCAGGGCTGTGCCGGA.........................................................................................2311.001.00---------------------1.00------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................TCAGCGCATCGTGACCAAGCTGC...............2311.001.00-------------------------------------------------------------1.00--------------------------------
..................................................................................................................................................................................................................................................................................AGGCTGGAGTGTCTTCAGC.................................1911.001.00-----------------------------------------------------------1.00----------------------------------
....................................................................................................................................................................................................................................................................................GCTGGAGTGTCTTCAGCGCATCGTGAC.......................2711.001.00------------------1.00---------------------------------------------------------------------------
.............................................................................................................................CCCCGCCCCCGGCGGGGGGG.....................................................................................................................................................................................2011.0046.00----1.00-----------------------------------------------------------------------------------------
...................GGGAGAAGCAGCTCCGCAGCGAGT...........................................................................................................................................................................................................................................................................................2411.001.00-------------1.00--------------------------------------------------------------------------------
.............................................................................................................................CCCCGCCCCCGGCGGGGGCG.....................................................................................................................................................................................2011.0046.00-1.00--------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................TCGTGACCAAGCTGCAGATGGAG.......2311.001.00----------------------------------1.00-----------------------------------------------------------
........................................................................................................................................................................................................................................................................................GAGTGTCTTCAGCGCATCGTGACC......................2411.001.00--------------------------------------------------------------------------1.00-------------------
.................................................................................................................................................................................................................................................................................................CAGCGCATCGTGACC......................1511.001.00-----1.00----------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................CAGCGCATCGTGACCAAGCTGCA..............2311.001.00--1.00-------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................GGAGTGTCTTCAGCGCATC............................1911.001.00---------------------1.00------------------------------------------------------------------------
....................................................................................................................................................................TAGGACAGTGGGCCACAG................................................................................................................................................1811.001.00------------------------------------------------1.00---------------------------------------------
.....................................................................................................................................................................................................CGGGAGGCGAGCTGCAGTCTGT...........................................................................................................2211.001.00----------------------------------------------------1.00-----------------------------------------
.......................................................................................................................................................................................................................................................................................GGAGTGTCTTCAGCGCATA............................191.000.00---1.00------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................TCGTGACCAAGCTGCAGAT...........1911.001.00--------------------------------------------------------1.00-------------------------------------
...........................................................................................................................................................................................................................................................................................................TGACCAAGCTGCAGATGGAGGC.....2211.001.00----------------------1.00-----------------------------------------------------------------------
.............................................................................................................................CCCCGCCCCCGGCGGGGGCGG....................................................................................................................................................................................2111.0046.00------------1.00---------------------------------------------------------------------------------
..............................................................................................................................CCCGCCCCCGGCGGGGGGG.....................................................................................................................................................................................1911.002.001.00---------------------------------------------------------------------------------------------
....................................................................................................................CCCTCCCCGCCCCGC...................................................................................................................................................................................................1501.001.00-------------------------------1.00--------------------------------------------------------------
...........................................................................................................................................................................................GAGACCGGAGCGGGAGAT.........................................................................................................................181.000.00------------------------------------------------------------------------1.00---------------------
...GTGGCCATCCTGGAGCGG.................................................................................................................................................................................................................................................................................................................1811.001.00--------------------1.00-------------------------------------------------------------------------
..................................................................................................................CCCCCTCCCCGCCCCGCGGG................................................................................................................................................................................................201.000.00---------------------------------------------------------------------------1.00------------------
....................................................................................................................................................................................................................................................................................................CGCATCGTGACCAAGCTGCAGA............2211.001.00--------------------------------------------------------------------1.00-------------------------
............CTGGAGCGGGAGAAGC..........................................................................................................................................................................................................................................................................................................1630.670.67---------0.67------------------------------------------------------------------------------------
...............................................................................................................................CCGCCCCCGGCGGGG........................................................................................................................................................................................1550.600.60--------------------------------0.20---------------------------------------------------0.20----0.20----
..............GGAGCGGGAGAAGCAGCT......................................................................................................................................................................................................................................................................................................1820.500.50------------------------0.50---------------------------------------------------------------------
.ACGTGGCCATCCTGGA.....................................................................................................................................................................................................................................................................................................................1620.500.50------------------------------------------------------------------------------0.50---------------
..........................................................................................................................................................................................................................................................................................................GTGACCAAGCTGCAGA............1630.330.33------0.33---------------------------------------------------------------------------------------
........................................................GGGGCCCTGTGGTGGC..............................................................................................................................................................................................................................................................1660.330.33-----------0.33----------------------------------------------------------------------------------
.............................................................................................................................CCCCGCCCCCGGCGGGCC.......................................................................................................................................................................................1840.250.25-0.25--------------------------------------------------------------------------------------------
.............................................................................................................................CCCCGCCCCCGGCGGG.........................................................................................................................................................................................1640.250.25-----------------------------------------------------------------------------------0.25----------
.............................................................................................................................CCCCGCCCCCGGCGGGCGGG.....................................................................................................................................................................................2040.250.25-0.25--------------------------------------------------------------------------------------------
....................................................................................................................CCCTCCCCGCCCCGCCCCC...............................................................................................................................................................................................1950.200.20---------------------------------------------------------------------------------0.20------------
...............................................................................................................................CCGCCCCCGGCGGGGCG......................................................................................................................................................................................1750.200.60------------------------------------------------------------------------------------------0.20---
.................................................................................................................................................................................................................................................................................................................AGCTGCAGATGGAGGC.....1660.170.17---------------------------------------------------------------------------------------------0.17
.......................................................................................................................................................................................................................................................................................................................AGATGGAGGCGGGGC1580.120.12------------------------------------------------------------------------------0.12---------------

Antisense strand
CACGTGGCCATCCTGGAGCGGGAGAAGCAGCTCCGCAGCGAGTTTGAGAGGTGGGTGGGGCCCTGTGGTGGCAGGGGAACCACCCGAGGGTGTGTCACTGCCTGGGAAGGAAACCCCCCTCCCCGCCCCGCCCCCGGCGGGGGAACCCAAGCTCCCACTCGCCTTAGGACAGTGGGCCACAGCCAGGGAGACCGGAGCGGGAGGCGAGCTGCAGTCTGTGGCCAGGGCTGTGCCGGACCCGGCCAACGCGGCCCCTTCCCTGTGCTGCTGCTGCAGGCTGGAGTGTCTTCAGCGCATCGTGACCAAGCTGCAGATGGAGGCGGGGC
........................................................................................................................(((((((........))))))).......(((((((.(((((............(((....))).((....))...))))).)).)))))....................................................................................................................
........................................................................................................................121........................................................................................212................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
GSM532876(GSM532876)
G547T. (cervix)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577740(Rovira)
total RNA. (breast)
SRR029128(GSM416757)
H520. (cell line)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
TAX577738(Rovira)
total RNA. (breast)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532877(GSM532877)
G691N. (cervix)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
TAX577580(Rovira)
total RNA. (breast)
SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR189782SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
TAX577741(Rovira)
total RNA. (breast)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038859(GSM458542)
MM386. (cell line)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR191438(GSM715548)
175genomic small RNA (size selected RNA from . (breast)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR038863(GSM458546)
MM603. (cell line)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR040024(GSM532909)
G613N. (cervix)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR038862(GSM458545)
MM472. (cell line)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
TAX577743(Rovira)
total RNA. (breast)
SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
...............................................................................................................................CCGCCCCCGGCGGGGGCCC.................................................................................................................................................................................... 193.000.00---------1.00------1.00-----------------------------------------------1.00-----------------------------
..............................................................................................................................CCCGCCCCCGGCGGGGC....................................................................................................................................................................................... 1713.000.003.00---------------------------------------------------------------------------------------------
.............................................................................................................................................................CTGTCCTAAGGCGAG.......................................................................................................................................................... 1522.002.00-----2.00----------------------------------------------------------------------------------------
...............................................................................................................................CCGCCCCCGGCGGGGCCC..................................................................................................................................................................................... 1851.600.00----------------------------0.200.20-----------------------------------------------0.20---0.20---0.20-0.200.20---0.20-
............................................................................................................................CCCGCCGGGGGCGGGGC......................................................................................................................................................................................... 1721.501.500.500.50-----------------------------------------------------------------------------0.50--------------
.............................................................................................................................................................CTCGCCTTAGGACAGCT........................................................................................................................................................ 171.000.00-----0.50-------------------0.50--------------------------------------------------------------------
..............................................................................................................................CCCGCCCCCGGCGGGCC....................................................................................................................................................................................... 171.000.00-------------------------------------------------1.00--------------------------------------------
.......................................................................................................................................................................................................................................................................................ACGATGCGCTGAAGACACTCC.......................... 2111.001.00---------------------------------------------------1.00------------------------------------------
.................................................................................................................................GCCCCCGGCGGGGGAAG.................................................................................................................................................................................... 171.000.001.00---------------------------------------------------------------------------------------------
............................................................................................................................................................ACTCGCCTTAGGACATCA........................................................................................................................................................ 181.000.00--------------------1.00-------------------------------------------------------------------------
.............................................................................................................................................................CTCGCCTTAGGACAGCTC....................................................................................................................................................... 181.000.00-----------------------0.50-----------------------------------------------------0.50----------------
..............................................................................................................................CCCGCCCCCGGCGGGGAGC..................................................................................................................................................................................... 1911.000.00------------------1.00---------------------------------------------------------------------------
................................................................................................................................CGCCCCCGGCGGGGGCGC.................................................................................................................................................................................... 181.000.00---------------------------1.00------------------------------------------------------------------
.............................................................................................................................CCCCGCCCCCGGCGGGGGTG..................................................................................................................................................................................... 2011.000.00------------------------------------------------------------1.00---------------------------------
........................................................................................................................CCCCGCCCCGCCCCCGGCGCG......................................................................................................................................................................................... 211.000.00-------------------------1.00--------------------------------------------------------------------
.............................................................................................................................CCCCGCCCCCGGCGGGGG....................................................................................................................................................................................... 1811.000.001.00---------------------------------------------------------------------------------------------
..............................................................................................................................CCCGCCCCCGGCGGGCGTC..................................................................................................................................................................................... 191.000.00---------------1.00------------------------------------------------------------------------------
....................................................................................................................................CCCGGCGGGGGAACCTC................................................................................................................................................................................. 171.000.00---------1.00------------------------------------------------------------------------------------
............................................................................................................................CCCCGCCGGGGGCGGGGC........................................................................................................................................................................................ 1811.001.00------------1.00---------------------------------------------------------------------------------
..........................................................................................................................CCGCCCCGCCCCCGGCGGGGA....................................................................................................................................................................................... 211.000.00-------1.00--------------------------------------------------------------------------------------
...................................................................................................................................................AGGCGAGTGGGAGCTTG.................................................................................................................................................................. 1711.001.00--------------------------------------------------------------1.00-------------------------------
..................................................................................................................................................................................................................................................GCACAGGGAAGGGGCCGCGTTGG............................................................. 2311.001.00----------------1.00-----------------------------------------------------------------------------
......................................................................................................................................................................................................................................TGCCGGACCCGGCCAACGCTTAG......................................................................... 231.000.00----------------------------------------------1.00-----------------------------------------------
..............................................................................................................................CCCGCCCCCGGCGGGTGC...................................................................................................................................................................................... 181.000.00-----------------------1.00----------------------------------------------------------------------
.......................................................................................................................TCCCCGCCCCGCCCCCTG............................................................................................................................................................................................. 181.000.00-------------1.00--------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................CCAACGCGGCCCCTTGTTC................................................................. 191.000.00---------------------------------------------------------1.00------------------------------------
..............................................................................................................................CCCGCCCCCGGCGGGA........................................................................................................................................................................................ 161.000.001.00---------------------------------------------------------------------------------------------
.............................................................................................................................CCCCGCCGGGGGCGGGG........................................................................................................................................................................................ 1711.001.00-------------------------------------------------------------------------1.00--------------------
.........................................................................................................................................................................................................................................................................................AGTGTCTTCAGCGCATCTCA......................... 201.000.00-----------------------------------1.00----------------------------------------------------------
........................................................................................................................................................................................................................................................................................GATGCGCTGAAGACACTC............................ 1811.001.00-------------------------------------1.00--------------------------------------------------------
..........................................................................................................................CCGCCCCGCCCCCGGCGA.......................................................................................................................................................................................... 181.000.00--1.00-------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................ATGCGCTGAAGACACTCC............................. 1811.001.00-----------------------------------------------------------------1.00----------------------------
........................................................................................................................................................................................................................................CCGGACCCGGCCAACAAGC........................................................................... 191.000.00----1.00-----------------------------------------------------------------------------------------
............................................................................................................................................................ACTCGCCTTAGGACATCAG....................................................................................................................................................... 191.000.00-----------------------------------------------------1.00----------------------------------------
........................................................................................................................CCCGCCGGGGGCGGGGCGGGG......................................................................................................................................................................................... 2111.001.00----------------------------------------------------------1.00-----------------------------------
..............................................................................................................AAACCCCCCTCCCCGGATA..................................................................................................................................................................................................... 191.000.00------------------------------------1.00---------------------------------------------------------
.............................................................................................................................CCCCGCCCCCGGCGGGGGGA..................................................................................................................................................................................... 2011.000.00-------1.00--------------------------------------------------------------------------------------
...............................................................................................................................CCCCGCCGGGGGCGG........................................................................................................................................................................................ 1550.800.800.20-----------------------------0.200.20-----------------------------------------------------------0.20--
.............................................................................................................................CCCGCCGGGGGCGGGG......................................................................................................................................................................................... 1640.750.750.75---------------------------------------------------------------------------------------------
.............................................................................................................................................................CTCGCCTTAGGACAGCTCA...................................................................................................................................................... 190.500.00--------------------------------------------------------------------------------0.50-------------
...............................................................................................................................CCGCCCCCGGCGGGGCC...................................................................................................................................................................................... 1750.400.00---------0.20----------------------------------------------------------------------------0.20-------
..............................................................................................................................................................................................................TGGCCACAGACTGCAGCT...................................................................................................... 1830.330.33----------0.33-----------------------------------------------------------------------------------
.............................................................................................................................CCCCGCCCCCGGCGGGGG....................................................................................................................................................................................... 1840.250.000.25---------------------------------------------------------------------------------------------
.............................................................................................................................CCCCGCCCCCGGCGGGGCC...................................................................................................................................................................................... 1940.250.000.25---------------------------------------------------------------------------------------------
.............................................................................................................................CCCCGCCCCCGGCGGGGC....................................................................................................................................................................................... 1840.250.00----------------------------------------------------------------------------------0.25-----------
.............................................................................................................................CCCCGCCCCCGGCGGGGGGC..................................................................................................................................................................................... 2040.250.000.25---------------------------------------------------------------------------------------------
.............................................................................................................................CCCCGCCCCCGGCGGGGGGA..................................................................................................................................................................................... 2040.250.00-0.25--------------------------------------------------------------------------------------------
...............................................................................................................................CCGCCCCCGGCGGGGCCCA.................................................................................................................................................................................... 1950.200.00-------0.20--------------------------------------------------------------------------------------
...............................................................................................................................CCGCCCCCGGCGGGGCGCG.................................................................................................................................................................................... 1950.200.00--------------------------0.20-------------------------------------------------------------------
...............................................................................................................................CCGCCCCCGGCGGGGCGC..................................................................................................................................................................................... 1850.200.00---------------------------0.20------------------------------------------------------------------