ID: uc003ysi.2_intron_0_0_chr8_128748870_f.5p
GENE: (1)
chr8:128748820-128749069+


(3)
AGO1.ip 		(2)
AGO2.ip 		(5)
B-CELL 		(2)
BRAIN 		(3)
BREAST 		(24)
CELL-LINE 		(2)
CERVIX 		(3)
HEART 		(6)
HELA 		(1)
LIVER 		(3)
OTHER 		(13)
SKIN 		(1)
UTERUS 		(2)
XRN.ip

Sense strand
TCCTTGCAGCTGCTTAGACGCTGGATTTTTTTCGGGTAGTGGAAAACCAGGTAAGCACCGAAGTCCACTTGCCTTTTAATTTATTTTTTTATCACTTTAATGCTGAGATGAGTCGAATGCCTAAATAGGGTGTCTTTTCTCCCATTCCTGCGCTATTGACACTTTTCTCAGAGTAGTTATGGTAACTGGGGCTGGGGTGGGGGGTAATCCAGAACTGGATCGGGGTAAAGTGACTTGTCAAGATGGGAGA
...........................................................................................(((...((.(((.(((..(((..((((((((.....)))))).))..)))...)))..))).)).)))...........................................................................................
.........................................................................74.....................................................................................161.......................................................................................
SizePerfect hitTotal NormPerfect NormSRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR037943(GSM510481)
293DcrTN. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR037935(GSM510473)
293cand3. (cell line)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR040010(GSM532895)
G529N. (cervix)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR189782TAX577741(Rovira)
total RNA. (breast)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR343335SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040027(GSM532912)
G220T. (cervix)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
.......................................................................CCTTTTAATTTATTTTTTTATCACTTTAATG....................................................................................................................................................31147.0047.00----22.0021.00---3.001.00------------------------------------------------------
......................GGATTTTTTTCGGGTAGTGG................................................................................................................................................................................................................20119.0019.0015.003.00-----------------1.00---------------------------------------------
..................CGCTGGATTTTTTTCGGGT.....................................................................................................................................................................................................................19113.0013.00-1.00-11.00-----------------------------1.00-------------------------------
..............................................................................ATTTATTTTTTTATCATTTA........................................................................................................................................................2013.000.00--10.00---------3.00----------------------------------------------------
.............................................................................AATTTATTTTTTTATCATTTA........................................................................................................................................................2112.000.00--12.00--------------------------------------------------------------
..................CGCTGGATTTTTTTCGGGTAGTGGA...............................................................................................................................................................................................................25111.0011.004.006.00----1.00----------------------------------------------------------
.......................GATTTTTTTCGGGTAGTGGAAA.............................................................................................................................................................................................................2218.008.003.005.00---------------------------------------------------------------
.......................................................................CCTTTTAATTTATTTTTTTATCACTTTAAT.....................................................................................................................................................3017.007.00----5.002.00-----------------------------------------------------------
..............TAGACGCTGGATTTTTTTCGGGTAGTGG................................................................................................................................................................................................................2817.007.00--------7.00--------------------------------------------------------
......................GGATTTTTTTCGGGTAGTGGA...............................................................................................................................................................................................................2117.007.004.003.00---------------------------------------------------------------
.............................................................................AATTTATTTTTTTATCATTT.........................................................................................................................................................205.000.00--4.00---------1.00----------------------------------------------------
.CCTTGCAGCTGCTTAGA........................................................................................................................................................................................................................................1725.005.00---5.00-------------------------------------------------------------
...........................................................................................................................................TCCCATTCCTGCGCTATT.............................................................................................1815.005.00---5.00-------------------------------------------------------------
.......................GATTTTTTTCGGGTAGTGGA...............................................................................................................................................................................................................2015.005.003.002.00---------------------------------------------------------------
.................................GGGTAGTGGAAAACCAG........................................................................................................................................................................................................1715.005.00---5.00-------------------------------------------------------------
......................GGATTTTTTTCGGGTAGTGGAAT.............................................................................................................................................................................................................234.000.00-----------4.00-----------------------------------------------------
.......AGCTGCTTAGACGCTGGATTTT.............................................................................................................................................................................................................................2213.003.003.00----------------------------------------------------------------
............................TTTTCGGGTAGTGGAAAACCAGCAG.....................................................................................................................................................................................................253.000.001.00------------------------2.00---------------------------------------
......................GGATTTTTTTCGGGTAGTGGAAAACCAGC.......................................................................................................................................................................................................2913.003.00------3.00----------------------------------------------------------
.......AGCTGCTTAGACGCTGGATTTTTTTCGGGTAG...................................................................................................................................................................................................................3213.003.00---------------3.00-------------------------------------------------
.......................GATTTTTTTCGGGTAGTGGAA..............................................................................................................................................................................................................2113.003.00-2.00----------------------1.00----------------------------------------
.................ACGCTGGATTTTTTTCGGGT.....................................................................................................................................................................................................................2013.003.00------3.00----------------------------------------------------------
..................................................GTAAGCACCGAAGTCCACTTGCCTTTTA............................................................................................................................................................................2813.003.00------------------3.00----------------------------------------------
........................ATTTTTTTCGGGTAGTGG................................................................................................................................................................................................................1813.003.001.00------------1.00--------------------------------------1.00------------
................................CGGGTAGTGGAAAACCAG........................................................................................................................................................................................................1813.003.001.00--------------------1.00---------------1.00---------------------------
.......................GATTTTTTTCGGGTAGTG.................................................................................................................................................................................................................1813.003.00-3.00---------------------------------------------------------------
......................................................................................................................................................................................................................CTGGATCGGGGTAAAGTGACTTG.............2313.003.003.00----------------------------------------------------------------
.................ACGCTGGATTTTTTTCGGGTAGTGGAA..............................................................................................................................................................................................................2713.003.00-3.00---------------------------------------------------------------
......................GGATTTTTTTCGGGTAGTGGAAAACCAG........................................................................................................................................................................................................2813.003.00------2.001.00---------------------------------------------------------
.................................................................................................................................................................................TATGGTAACTGGGGCTGG.......................................................1812.002.002.00----------------------------------------------------------------
................................CGGGTAGTGGAAAACCAGCAGC....................................................................................................................................................................................................2212.003.001.00---------------------------1.00------------------------------------
.............................TTTCGGGTAGTGGAAAACCAGCC......................................................................................................................................................................................................2312.001.00-----------------2.00-----------------------------------------------
................................CGGGTAGTGGAAAACCAGC.......................................................................................................................................................................................................1912.003.002.00----------------------------------------------------------------
..................CGCTGGATTTTTTTCGGGTAGTGGAAA.............................................................................................................................................................................................................2712.002.002.00----------------------------------------------------------------
.............................................................................................ACTTTAATGCTGAGATG............................................................................................................................................1712.002.00----------------------2.00------------------------------------------
........................ATTTTTTTCGGGTAGTGGAA..............................................................................................................................................................................................................2012.002.00-1.00-----------1.00---------------------------------------------------
............................TTTTCGGGTAGTGGAAAACCAGC.......................................................................................................................................................................................................232.000.001.00-------------------------------------------------------1.00--------
.......................................................................CCTTTTAATTTATTTTTTTATCACTTAATG.....................................................................................................................................................302.000.00----1.001.00-----------------------------------------------------------
..........TGCTTAGACGCTGGATTTTTTTCGGGT.....................................................................................................................................................................................................................2712.002.002.00----------------------------------------------------------------
..............................TTCGGGTAGTGGAAAACCAGG.......................................................................................................................................................................................................2112.002.001.00------1.00---------------------------------------------------------
....TGCAGCTGCTTAGACGCTGGATTTTTTTCGGGTAGT..................................................................................................................................................................................................................3612.002.00--------------2.00--------------------------------------------------
.......................................................................CCTTTTAATTTATTTTTTTATCACTTTAACG....................................................................................................................................................312.000.00---------1.001.00------------------------------------------------------
...............................TCGGGTAGTGGAAAACCAGCC......................................................................................................................................................................................................2112.001.001.00-----------------------------------1.00----------------------------
.......................GATTTTTTTCGGGTAGTGG................................................................................................................................................................................................................1912.002.002.00----------------------------------------------------------------
............................................................................TAATTTATTTTTTTATCTTTC.........................................................................................................................................................212.000.00---------1.001.00------------------------------------------------------
........................................................................CTTTTAATTTATTTTTTTATTG............................................................................................................................................................222.000.00---------1.001.00------------------------------------------------------
............................................................................................................................................................................GTAGTTATGGTAACTGGGGCT.........................................................2112.002.00-------2.00---------------------------------------------------------
.......................................................................CCTTTTAATTTATTTTTTTATCACTTTAATA....................................................................................................................................................3111.007.00-----1.00-----------------------------------------------------------
............CTTAGACGCTGGATTTTTTTCGGGTAGTGGA...............................................................................................................................................................................................................3111.001.00--------------------1.00--------------------------------------------
....................................................................................................................................................................................................................AACTGGATCGGGGTAAAGTG..................2011.001.00---------------------------------------1.00-------------------------
.........CTGCTTAGACGCTGGATTTTTTTCGGGTAGGGG................................................................................................................................................................................................................331.000.00-------------------------------------------------1.00---------------
..................CGCTGGATTTTTTTCGGTT.....................................................................................................................................................................................................................191.000.00---1.00-------------------------------------------------------------
......................GGATTTTTTTCGGGTAGTGGT...............................................................................................................................................................................................................2111.0019.00---------------------------------------------------------1.00-------
......CAGCTGCTTAGACGCTGGATTTTTTTCGGT......................................................................................................................................................................................................................301.000.00-------------------1.00---------------------------------------------
.............TTAGACGCTGGATTTTTTTCGGGT.....................................................................................................................................................................................................................2411.001.00----------------------------------------1.00------------------------
.............................................................................AATTTATTTTTTTATCAGTT.........................................................................................................................................................201.000.00--1.00--------------------------------------------------------------
...........GCTTAGACGCTGGATTTTTTTCGG.......................................................................................................................................................................................................................2411.001.00----------------------------1.00------------------------------------
..............................TTCGGGTAGTGGAAAACC..........................................................................................................................................................................................................1811.001.00-------1.00---------------------------------------------------------
..............................................................................ATTTATTTTTTTATCAGTTA........................................................................................................................................................201.000.00--1.00--------------------------------------------------------------
......................................................................................TTTTATCACTTTAATGCTGAGAT.............................................................................................................................................2311.001.00----------------------------------------------1.00------------------
................................................................................................................................................................................................TGGGGTGGGGGGTAATCGG.......................................191.000.00-------------------------------------------1.00---------------------
......................GGATTTTTTTCGGGTAGTTTT...............................................................................................................................................................................................................211.000.001.00----------------------------------------------------------------
.........CTGCTTAGACGCTGGATTTTTTTCGGGTAGTG.................................................................................................................................................................................................................3211.001.00------------------------------1.00----------------------------------
.......AGCTGCTTAGACGCTGGATTTTTTTCGGGTAGTGGA...............................................................................................................................................................................................................3611.001.00---------------------------1.00-------------------------------------
.......................................................................CCTTTTAATTTATTTTTTTATCAC...........................................................................................................................................................2411.001.00----------1.00------------------------------------------------------
.................................................................................................................................................................................................................CAGAACTGGATCGGGGTAAAGTGACTTG.............2811.001.00--------------------------1.00--------------------------------------
.......................................................................................................................................................................................................................TGGATCGGGGTAAAGTGACT...............2011.001.00-----------------------------------1.00-----------------------------
...............................TCGGGTAGTGGAAAACCAG........................................................................................................................................................................................................1911.001.001.00----------------------------------------------------------------
...........................TTTTTCGGGTAGTGGAAAACCA.........................................................................................................................................................................................................2211.001.00------1.00----------------------------------------------------------
......................................................................................................................................................................................................................CTGGATCGGGGTAAAGTGACTT..............2211.001.00-1.00---------------------------------------------------------------
...............................TCGGGTAGTGGAAAACCAGC.......................................................................................................................................................................................................2011.001.001.00----------------------------------------------------------------
........................ATTTTTTTCGGGTAGTGGAC..............................................................................................................................................................................................................2011.001.00-1.00---------------------------------------------------------------
..............................TTCGGGTAGTGGAAAACCAGCC......................................................................................................................................................................................................2211.001.001.00----------------------------------------------------------------
..............................TTCGGGTAGTGGAAAAC...........................................................................................................................................................................................................1711.001.00---1.00-------------------------------------------------------------
.............TTAGACGCTGGATTTTTTTCGGG......................................................................................................................................................................................................................2311.001.00---------------------------1.00-------------------------------------
..........................................................................................................................................................................GAGTAGTTATGGTAACTGGGG...........................................................2111.001.00-1.00---------------------------------------------------------------
.............................TTTCGGGTAGTGGAAAACCAGGTAAGC..................................................................................................................................................................................................2711.001.001.00----------------------------------------------------------------
..............................TTCGGGTAGTGGAAAACCAGGTAAGCA.................................................................................................................................................................................................2711.001.001.00----------------------------------------------------------------
..............................TTCGGGTAGTGGAAAACCAGCA......................................................................................................................................................................................................2211.001.001.00----------------------------------------------------------------
..................CGCTGGATTTTTTTCGGG......................................................................................................................................................................................................................1811.001.00---1.00-------------------------------------------------------------
.................................................................................................................................................................................................................CAGAACTGGATCGGGGTAAAGTGA.................2411.001.00--------------------------1.00--------------------------------------
.................ACGCTGGATTTTTTTCGGGTAGTGGA...............................................................................................................................................................................................................2611.001.00-1.00---------------------------------------------------------------
...................................................................................................................................................................................................................................AAGTGACTTGTCAAGATGGGA..2111.001.00--------------------1.00--------------------------------------------
................................................................................................................................................................................................................CCAGAACTGGATCGGG..........................1611.001.00------------------------------------------------------1.00----------
......................................................................................................................................................................CTCAGAGTAGTTATGGTAACTGG.............................................................2311.001.00-------1.00---------------------------------------------------------
..................................................GTAAGCACCGAAGTCCACTTGCCT................................................................................................................................................................................2411.001.00--------------------------------------------1.00--------------------
.........................TTTTTTTCGGGTAGTGGAAAACCAG........................................................................................................................................................................................................2511.001.00-------------------------------1.00---------------------------------
......................GGATTTTTTTCGGGTAGTTG................................................................................................................................................................................................................201.000.00-1.00---------------------------------------------------------------
........................ATTTTTTTCGGGTAGTGGAAAACCAG........................................................................................................................................................................................................2611.001.00-------------1.00---------------------------------------------------
..........................................................................................................................................................................................................................ATCGGGGTAAAGTGACTTGTCAAG........2411.001.00-------------1.00---------------------------------------------------
.............................................................................AATTTATTTTTTTATCATTG.........................................................................................................................................................201.000.00--1.00--------------------------------------------------------------
..............................................................................................................AGTCGAATGCCTAAATAGGGTG......................................................................................................................2211.001.00------1.00----------------------------------------------------------
...................GCTGGATTTTTTTCGGGTAGTGG................................................................................................................................................................................................................2311.001.00-----------------------------------------1.00-----------------------
...................................................................................................................AATGCCTAAATAGGGTG......................................................................................................................1711.001.00-------1.00---------------------------------------------------------
............................................................................................CACTTTAATGCTGAGAT.............................................................................................................................................1711.001.00-----------------------------------------------------------1.00-----
..............................TTCGGGTAGTGGAAAACCAG........................................................................................................................................................................................................2011.001.00------------------------------------------------1.00----------------
...............AGACGCTGGATTTTTTTCGGGTAG...................................................................................................................................................................................................................2411.001.00------1.00----------------------------------------------------------
.............................................................................................................................................................................................................AATCCAGAACTGGATGGA...........................181.000.00---------------------------------------------1.00-------------------
..............................TTCGGGTAGTGGAAAACCAGCAGC....................................................................................................................................................................................................2411.001.001.00----------------------------------------------------------------
......CAGCTGCTTAGACGCTGGAT................................................................................................................................................................................................................................2011.001.00----------------------------------1.00------------------------------
.CCTTGCAGCTGCTTAATC.......................................................................................................................................................................................................................................181.000.00-----------------------1.00-----------------------------------------
..............................................................................................................................................................ACACTTTTCTCAGAGAAG..........................................................................181.000.00---------------------------------------------------------------1.00-
..................CGCTGGATTTTTTTCGGGTAGTGG................................................................................................................................................................................................................2411.001.00-1.00---------------------------------------------------------------
.............................TTTCGGGTAGTGGAAAACCAG........................................................................................................................................................................................................2111.001.00-------1.00---------------------------------------------------------
.................ACGCTGGATTTTTTTCGGGTAG...................................................................................................................................................................................................................2211.001.00----------------------------------------------------------1.00------
.......................GATTTTTTTCGGGTAGCGGA...............................................................................................................................................................................................................201.000.00-1.00---------------------------------------------------------------
........................................................................CTTTTAATTTATTTTTTTATCACTTTAATG....................................................................................................................................................3011.001.00-----1.00-----------------------------------------------------------
............................................................................................................TGAGTCGAATGCCTAAATAGGGTGT.....................................................................................................................2511.001.00------------------------------------------1.00----------------------
.............................TTTCGGGTAGTGGAAAACCAGCCT.....................................................................................................................................................................................................2411.001.00-------1.00---------------------------------------------------------
........................ATTTTTTTCGGGTAGTGGAAA.............................................................................................................................................................................................................2111.001.00-1.00---------------------------------------------------------------
........................ATTTTTTTCGGGTAGTGGA...............................................................................................................................................................................................................1911.001.00------------------------------------------------------------1.00----
................GACGCTGGATTTTTTTCGGGT.....................................................................................................................................................................................................................2111.001.00-----------------------------------------------1.00-----------------
.......................................................................................TTTATCACTTTAATGCTGAGAT.............................................................................................................................................2211.001.00--------------------------------------------------------------1.00--
..CTTGCAGCTGCTTAGACGC.....................................................................................................................................................................................................................................1911.001.00---------------------------------------------------1.00-------------
............................TTTTCGGGTAGTGGAAAACCAGCA......................................................................................................................................................................................................241.000.00-----------------1.00-----------------------------------------------
...........................TTTTTCGGGTAGTGGAAAACCAGGTAAGCACC...............................................................................................................................................................................................3211.001.00-------1.00---------------------------------------------------------
.............................................................................................................................................................................TAGTTATGGTAACTGGGGCTGGGG.....................................................2411.001.00-------------------1.00---------------------------------------------
.............................................................................AATTTATTTTTTTATCACTTTAAT.....................................................................................................................................................2411.001.00-----1.00-----------------------------------------------------------
.............................................................................AATTTATTTTTTTATCATGGA........................................................................................................................................................211.000.00--1.00--------------------------------------------------------------
.............................TTTCGGGTAGTGGAAAACCAGCAG.....................................................................................................................................................................................................2411.001.001.00----------------------------------------------------------------
..............................TTCGGGTAGTGGAAAACCAGCAG.....................................................................................................................................................................................................2311.001.00------1.00----------------------------------------------------------
..................................................................................................................................................................TTTTCTCAGAGTAGTTATGG....................................................................2011.001.00-1.00---------------------------------------------------------------
.............................TTTCGGGTAGTGGAAAACCAGCAGC....................................................................................................................................................................................................2511.001.00-1.00---------------------------------------------------------------
................................................................................................................................................................................................................................GTAAAGTGACTTGTCAAGATGGGAGA2611.001.00------------------------1.00----------------------------------------
.....................TGGATTTTTTTCGGGTAGTGG................................................................................................................................................................................................................2111.001.001.00----------------------------------------------------------------
...................................................................................TTTTTTTATCACTTTACC.....................................................................................................................................................181.000.00-----------------------------1.00-----------------------------------
...............................TCGGGTAGTGGAAAACCAGGTAAGCACC...............................................................................................................................................................................................2811.001.001.00----------------------------------------------------------------
..............................................................................ATTTATTTTTTTATCAGTGA........................................................................................................................................................201.000.00--1.00--------------------------------------------------------------
...........................TTTTTCGGGTAGTGGAAAACCAGG.......................................................................................................................................................................................................2411.001.001.00----------------------------------------------------------------
..........TGCTTAGACGCTGGATTTTTTTCGGGTAGTGGA...............................................................................................................................................................................................................3311.001.00--------------1.00--------------------------------------------------
..............................TTCGGGTAGTGGAAAACCAGGTAAGCAGA...............................................................................................................................................................................................2911.001.00--------------1.00--------------------------------------------------
.............................................................................AATTTATTTTTTTATCCTTT.........................................................................................................................................................201.000.00-----------------------------1.00-----------------------------------
.............TTAGACGCTGGATTTTTTTCGGGTAGT..................................................................................................................................................................................................................2711.001.00---------------------1.00-------------------------------------------
..............................................................................ATTTATTTTTTTATCTAGG.........................................................................................................................................................191.000.00----------1.00------------------------------------------------------
...................................................................................................................................................................................................................................AAGTGACTTGTCAAGATG.....1820.500.50------0.50----------------------------------------------------------
..............................................................................................CTTTAATGCTGAGATGAG..........................................................................................................................................1820.500.50----------------------------------------------------------------0.50
..............................................................................................................AGTCGAATGCCTAAATAG..........................................................................................................................1820.500.50-------0.50---------------------------------------------------------
........................................................................CTTTTAATTTATTTTTTTA...............................................................................................................................................................1970.140.14----0.14------------------------------------------------------------

Antisense strand
TCCTTGCAGCTGCTTAGACGCTGGATTTTTTTCGGGTAGTGGAAAACCAGGTAAGCACCGAAGTCCACTTGCCTTTTAATTTATTTTTTTATCACTTTAATGCTGAGATGAGTCGAATGCCTAAATAGGGTGTCTTTTCTCCCATTCCTGCGCTATTGACACTTTTCTCAGAGTAGTTATGGTAACTGGGGCTGGGGTGGGGGGTAATCCAGAACTGGATCGGGGTAAAGTGACTTGTCAAGATGGGAGA
...........................................................................................(((...((.(((.(((..(((..((((((((.....)))))).))..)))...)))..))).)).)))...........................................................................................
.........................................................................74.....................................................................................161.......................................................................................
SizePerfect hitTotal NormPerfect NormSRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR037943(GSM510481)
293DcrTN. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR037935(GSM510473)
293cand3. (cell line)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR040010(GSM532895)
G529N. (cervix)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR189782TAX577741(Rovira)
total RNA. (breast)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR343335SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040027(GSM532912)
G220T. (cervix)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
.......................................................AGGCAAGTGGACTTCGGTG................................................................................................................................................................................ 1913.003.00----------------3.00------------------------------------------------
..............................................................................................................................................................ACACTTTTCTCAGAGAGGG......................................................................... 191.000.00-----------------------1.00-----------------------------------------
.........................................................TAAAAGGCAAGTGGACTTCGG............................................................................................................................................................................ 2111.001.00-------------------------------------------------------------1.00---
.......................................................AAAGGCAAGTGGACTTCGGTG.............................................................................................................................................................................. 2111.001.00-----------------------------------------------------1.00-----------
.........................................................CCGAAGTCCACTTGCCTCGC............................................................................................................................................................................. 201.000.00--------------------------------1.00--------------------------------
..................................................................................................AATGCTGAGATGAGTTCTG..................................................................................................................................... 191.000.00--------------------------------------------------1.00--------------
.........................................................AAGGCAAGTGGACTTCGG............................................................................................................................................................................... 1811.001.00-------------------------------------------------------1.00---------
....................................................................................................................................CAGGAATGGGAGAAAAGA.................................................................................................... 1840.250.250.25----------------------------------------------------------------