ID: uc003ypm.2_intron_1_0_chr8_124031486_r.3p
GENE: DERL1(6)
chr8:124031436-124031685-


(1)
AGO2.ip 		(12)
B-CELL 		(1)
BRAIN 		(4)
BREAST 		(18)
CELL-LINE 		(2)
CERVIX 		(4)
HEART 		(1)
HELA 		(1)
KIDNEY 		(6)
LIVER 		(1)
OTHER 		(8)
SKIN 		(1)
XRN.ip

Sense strand
AAAGTGCTCATTGTCAGCTCTCACAGACTCCCAGGGACTAAATGGGCTGCCTTGAAGGCTCTCTTCCTTATGCTATTAGTTAAAACTTGGTGCATCTCTATTGCTTGAATGTCTTTAAACTCATTTGGCTCTCTTTGCAGGGTAATCAATGAGCTTATTGGAAATCTGGTTGGACATCTTTATTTTTTCCTAATGTTCAGATACCCAATGGACTTGGGAGGAAGAAATTTTCTATCCACACCTCAGTTTT
............................................................................................................................................................(((((..((((((..(((.............)))......))))))..))))).........................................
..................................................................................................................................................147...........................................................209.......................................
SizePerfect hitTotal NormPerfect NormSRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR040019(GSM532904)
G701T. (cervix)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR189785SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR390724(GSM850203)
small rna immunoprecipitated. (cell line)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577740(Rovira)
total RNA. (breast)		TAX577739(Rovira)
total RNA. (breast)		SRR040025(GSM532910)
G613T. (cervix)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR191595(GSM715705)
72genomic small RNA (size selected RNA from t. (breast)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM359177(GSM359177)
hela_nucl_a. (hela)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR189784SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
....................................................................................................................................................ATGAGCTTATTGGAAATCTGGTTGGACA..........................................................................2816.006.006.00-----------------------------------------------------------
.......................................................................................................................................................AGCTTATTGGAAATCTGGTTGGA............................................................................2314.004.00-1.00--------------1.00------1.00------------------1.00-----------------
..............................................................................................................................................................TGGAAATCTGGTTGGACA..........................................................................1814.004.00-1.00--1.00-1.00-----------------------------1.00-----------------------
.............................................................................................................................................................................................................CAATGGACTTGGGAGGAAGAAATTTTC..................2713.003.00---3.00--------------------------------------------------------
............................................................................................................................................................ATTGGAAATCTGGTTGGACA..........................................................................2013.003.00-2.00---------1.00------------------------------------------------
................................................................................................................................................................................................................TGGACTTGGGAGGAAGAAA.......................1913.003.00-----------------1.00--------1.00----------1.00----------------------
......................................................................................................................................................GAGCTTATTGGAAATCTGGTTGGA............................................................................2413.003.003.00-----------------------------------------------------------
............................................................................................................................................................................................................CCAATGGACTTGGGAGGAAG..........................2013.003.00-1.00--------------------------------1.00---------1.00---------------
.............................................................................................................................................................TTGGAAATCTGGTTGGACA..........................................................................1913.003.00--1.00------------1.00---------------------------------1.00----------
...............................................................................................................................................................................................................ATGGACTTGGGAGGAAGAA........................1922.502.50-----0.50------------1.50-------------------------------------0.50---
......................................................................................................................................................................................................AGATACCCAATGGACTTGGGAGGAAG..........................2612.002.00-------------2.00----------------------------------------------
...........................................................................................................................................................TATTGGAAATCTGGTTGGACATC........................................................................2312.002.00------------1.00---------1.00-------------------------------------
..............................................................................................................................................................................................................AATGGACTTGGGAGGAAGAAATTTTCT.................2712.002.002.00-----------------------------------------------------------
............................................................................................................................................................................................................CCAATGGACTTGGGAGGAAGAAATTTT...................2712.002.00---------2.00--------------------------------------------------
.............................................................................................................................................................................ACATCTTTATTTTTTCCTAATG.......................................................2212.002.00----------2.00-------------------------------------------------
................................................................................................................................................................................................ATGTTCAGATACCCAATGG.......................................1912.002.00-------2.00----------------------------------------------------
...............................................................................................................................................................GGAAATCTGGTTGGACAT.........................................................................1812.002.00---2.00--------------------------------------------------------
................................................................................................................................................................GAAATCTGGTTGGACATCTTT.....................................................................2112.002.00--2.00---------------------------------------------------------
...................................................................................................................................................................ATCTGGTTGGACATCTTTA....................................................................1911.001.00-----------------------------1.00------------------------------
.............................................................................................................................................................TTGGAAATCTGGTTGGACAT.........................................................................2011.001.00----1.00-------------------------------------------------------
..........................................................................................................................................................TTATTGGAAATCTGGTTGG.............................................................................1911.001.00------------------------------1.00-----------------------------
.........................................................................................................................................................CTTATTGGAAATCTGGTTGGAT...........................................................................221.000.00----------------------------------------------1.00-------------
.......................................................................................................................................................................................TTTTTCCTAATGTTCAGATACC.............................................2211.001.00--------------------1.00---------------------------------------
.........................................ATGGGCTGCCTTGAAGGCTC.............................................................................................................................................................................................2011.001.00-----------------------------------1.00------------------------
.......................................................................................................................................................AGCTTATTGGAAATCTGGTTGGACATA........................................................................271.000.00--1.00---------------------------------------------------------
...........................................................................................................................................................TATTGGAAATCTGGTTGGAC...........................................................................2011.001.00-----------1.00------------------------------------------------
..............................................................................................................................................................................................................AATGGACTTGGGAGGAAGAA........................2011.001.00--1.00---------------------------------------------------------
..............................................................................................................................................................................................................AATGGACTTGGGAGGAAG..........................1811.001.00---------------1.00--------------------------------------------
.................................................................................................................................................................AAATCTGGTTGGACATTT.......................................................................181.000.00----------------------------------------1.00-------------------
........................................................................................................................................................................................................ATACCCAATGGACTTGG.................................1711.001.00--------------1.00---------------------------------------------
..............................................................................................................................................................TGGAAATCTGGTTGGACATCTTA.....................................................................231.000.00-----1.00------------------------------------------------------
................................................................................................................................................................GAAATCTGGTTGGACATA........................................................................181.000.00------------------------1.00-----------------------------------
...........................................................................................................................................................................................................CCCAATGGACTTGGGAGGAAGA.........................2211.001.00----------------1.00-------------------------------------------
.................................................................................................................................................................AAATCTGGTTGGACATAT.......................................................................181.000.00-----------------------------------------1.00------------------
..................................................................................................................................................................................................................GACTTGGGAGGAAGAAATT.....................1911.001.00--------------------------------------------------1.00---------
.................................................................................................................................................................AAATCTGGTTGGACATCT.......................................................................1811.001.00-1.00----------------------------------------------------------
.............................................................................................................................................................................................................CAATGGACTTGGGAGGAAGAAATTTTCT.................2811.001.00-------------------------------------------1.00----------------
..........TTGTCAGCTCTCACAGACTCCCAGGG......................................................................................................................................................................................................................2611.001.00---------------------------------------1.00--------------------
...............................................................................................................................................................................................................ATGGACTTGGGAGGAAGCA........................191.000.00-----1.00------------------------------------------------------
......................................................................................................................................................................................................AGATACCCAATGGACTTGG.................................1911.001.00-------------------1.00----------------------------------------
.............................................................................................................................................................................................................CAATGGACTTGGGAGGAAGAA........................2111.001.00------------1.00-----------------------------------------------
.......................................................................................................................................................AGCTTATTGGAAATCTGGTTGGACA..........................................................................2511.001.00----1.00-------------------------------------------------------
..........................................TGGGCTGCCTTGAAGGCT..............................................................................................................................................................................................1811.001.00--------------1.00---------------------------------------------
.......................................................................................................................................................AGCTTATTGGAAATCTGGTTGGACATT........................................................................271.000.00--1.00---------------------------------------------------------
.................................................................................................................................................................AAATCTGGTTGGACATCTT......................................................................1911.001.00---------------------------------------------1.00--------------
..............................................................................................................................................................TGGAAATCTGGTTGGACATC........................................................................2011.001.00------1.00-----------------------------------------------------
............................................................................................................................................................ATTGGAAATCTGGTTGGA............................................................................1811.001.00--------------------------------------1.00---------------------
.................................................................................................................................................................................CTTTATTTTTTCCTAACTT......................................................191.000.00------------------------------------------------1.00-----------
...........................................................................................................................................................TATTGGAAATCTGGTTGGACATCT.......................................................................2411.001.00----------------------------------------------------1.00-------
.....................................................................................................................................................TGAGCTTATTGGAAATCTGGTT...............................................................................2211.001.00---------------------------------1.00--------------------------
..............................................................................................................................................................................................................AATGGACTTGGGAGGAAGAAATTTTCTATC..............3011.001.00-----------------------------------------------1.00------------
.................................................................................................................................................................................................................................AATTTTCTATCCACACCTCAG....2111.001.00---------------------1.00--------------------------------------
...................................................................................................................................................................................TTATTTTTTCCTAATGTTCAGATACC.............................................2611.001.00---------------------------------------------------1.00--------
...............................................................................................................................................................GGAAATCTGGTTGGACATC........................................................................1911.001.00---1.00--------------------------------------------------------
................................................................................................................................................................GAAATCTGGTTGGACATC........................................................................1811.001.00--1.00---------------------------------------------------------
......................................................................................................................................................GAGCTTATTGGAAATCTGGTTGGACATCT.......................................................................2911.001.00----------------------------1.00-------------------------------
..............................................................................................................................................................TGGAAATCTGGTTGGAC...........................................................................1711.001.00--------1.00---------------------------------------------------
................................................................................................................................................................................................................TGGACTTGGGAGGAAGAAATTTTCTATC..............2811.001.00--------1.00---------------------------------------------------
.............................................................................................................................................................TTGGAAATCTGGTTGGACATCT.......................................................................2211.001.00--------------------------------1.00---------------------------
................................................................................................................................................................GAAATCTGGTTGGACATCT.......................................................................1911.001.00-1.00----------------------------------------------------------
................................................................................................................................................................................................................TGGACTTGGGAGGAAGAA........................1830.670.67-----------------0.67------------------------------------------
......................................................................................................................................................................TGGTTGGACATCTTTAT...................................................................1720.500.50-------------------------------------------------------0.50----
.............................................................................................................................................................................................................CAATGGACTTGGGAGGA............................1720.500.50------------------------------------------------------0.50-----
.........................................................................................................................................................................TTGGACATCTTTATTTT................................................................1750.200.20----------------------------------------------------------0.20-
...............................................................................................................................................................................................AATGTTCAGATACCC............................................1550.200.20-----------------------------------------------------------0.20

Antisense strand
AAAGTGCTCATTGTCAGCTCTCACAGACTCCCAGGGACTAAATGGGCTGCCTTGAAGGCTCTCTTCCTTATGCTATTAGTTAAAACTTGGTGCATCTCTATTGCTTGAATGTCTTTAAACTCATTTGGCTCTCTTTGCAGGGTAATCAATGAGCTTATTGGAAATCTGGTTGGACATCTTTATTTTTTCCTAATGTTCAGATACCCAATGGACTTGGGAGGAAGAAATTTTCTATCCACACCTCAGTTTT
............................................................................................................................................................(((((..((((((..(((.............)))......))))))..))))).........................................
..................................................................................................................................................147...........................................................209.......................................
SizePerfect hitTotal NormPerfect NormSRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR040019(GSM532904)
G701T. (cervix)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR189785SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR390724(GSM850203)
small rna immunoprecipitated. (cell line)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577740(Rovira)
total RNA. (breast)		TAX577739(Rovira)
total RNA. (breast)		SRR040025(GSM532910)
G613T. (cervix)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR191595(GSM715705)
72genomic small RNA (size selected RNA from t. (breast)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM359177(GSM359177)
hela_nucl_a. (hela)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR189784SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
..................................................................................................................................................................................................GTTCAGATACCCAATTCTG..................................... 191.000.00-------------------------1.00----------------------------------
...........................CTCCCAGGGACTAAACTCT............................................................................................................................................................................................................ 191.000.00-------------------------------1.00----------------------------
........CATTGTCAGCTCTCATCCA............................................................................................................................................................................................................................... 191.000.00---------------------------1.00--------------------------------
.....................................................................................................................................................................ATAAAGATGTCCAACCAG................................................................... 1820.500.50-----------------------------------------------------0.50------
........................................................GGCTCTCTTCCTTATCAC................................................................................................................................................................................ 180.380.00---0.38--------------------------------------------------------
........................................................ATAAGGAAGAGAGCC................................................................................................................................................................................... 1580.380.38---------------------------------------------------------0.38--