ID: uc003ymy.1_intron_0_0_chr8_109797367_r.5p
GENE: TMEM74(1)
chr8:109799505-109799754-


(1)
AGO2.ip
(4)
B-CELL
(4)
BRAIN
(4)
BREAST
(14)
CELL-LINE
(2)
CERVIX
(1)
HEART
(2)
HELA
(1)
KIDNEY
(1)
LIVER
(1)
OTHER
(22)
SKIN
(1)
TESTES

Sense strand
GCCGGGAGAGCGCGCGGTGCTGGAGCCGCACCGGGTGGCCGAAGCAGAAGGTGAGTGGCGGGGAGTGGGATGGGGTGGAGGCTTTGAATGCAAGGGTGAGAGCCCTGGAGCCTAGCAGAGCTGGAGCGCATATCCCCGCTCTCTCTCCTTCGTCTCCGAGTACTAGGCGGACACATCCGTACCTCGAATGCCTCAGTGGGCGCAGAGTTCACCAGAAATGGATAGCCGGATTCCTCGGCGCCTGCTGGGG
....................................................................................................((..((((((...((.((((..((((((........)))))))))).))....)))).))..))......................................................................................
....................................................................................................101.............................................................165...................................................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR189782GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189783SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR189784GSM359208(GSM359208)
hepg2_bindASP_hl_2. (cell line)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR037935(GSM510473)
293cand3. (cell line)
TAX577588(Rovira)
total RNA. (breast)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
GSM359209(GSM359209)
hepg2_biotin_el_hl_a. (cell line)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191493(GSM715603)
155genomic small RNA (size selected RNA from . (breast)
GSM359176(GSM359176)
hela_chip_smrna_pure. (hela)
SRR040036(GSM532921)
G243N. (cervix)
SRR037937(GSM510475)
293cand2. (cell line)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR189785SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577739(Rovira)
total RNA. (breast)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR040025(GSM532910)
G613T. (cervix)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM359178(GSM359178)
hela_nucl_t. (hela)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR038859(GSM458542)
MM386. (cell line)
SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553576(SRX182782)
source: Testis. (testes)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR038863(GSM458546)
MM603. (cell line)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)
SRR038858(GSM458541)
MEL202. (cell line)
SRR444050(SRX128898)
Sample 10cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
.........................................................................................................TGGAGCCTAGCAGAGCTGGAGCG..........................................................................................................................2318.008.00-------1.00-------1.00----1.00------1.00------------1.00-----1.001.00----1.00--------
...........................................................................................................................................TCTCTCTCCTTCGTCTCCGAGT.........................................................................................2217.007.00------------------1.001.00--------1.00-1.00----1.00---1.00----------1.00----------
......................................................................................................CCCTGGAGCCTAGCAGAGCTGGA.............................................................................................................................2315.005.003.00-----1.00-----1.00------------------------------------------------
..................................................GTGAGTGGCGGGGAGTAG......................................................................................................................................................................................182.000.00-1.00---1.00-------------------------------------------------------
...........................................................................................................................................TCTCTCTCCTTCGTCTCCG............................................................................................1912.002.00---2.00---------------------------------------------------------
.......................................................................................................CCTGGAGCCTAGCAGAGCTGGA.............................................................................................................................2212.002.00-------------------------------------1.00---1.00-------------------
.........................................................................GGTGGAGGCTTTGAAGTCG..............................................................................................................................................................191.000.00--------------------------1.00----------------------------------
.................................................................................................GAGAGCCCTGGAGCCTAGCAGAGCTGGA.............................................................................................................................2811.001.00------------------------------------1.00------------------------
.........................................................................................................TGGAGCCTAGCAGAGCTGGAG............................................................................................................................2111.001.00---------1.00---------------------------------------------------
.................................................................................................GAGAGCCCTGGAGCCTAGCAGAGCTGGAG............................................................................................................................2911.001.00-------------1.00-----------------------------------------------
.....................................................................................GAATGCAAGGGTGAGGGCT..................................................................................................................................................191.000.00-------------------------------------------------1.00-----------
.................................................................................................................AGCAGAGCTGGAGCGCCTA......................................................................................................................191.000.00----------1.00--------------------------------------------------
.........................................................................GGTGGAGGCTTTGAAGCA...............................................................................................................................................................181.000.00------------------------------------------1.00------------------
..................................................................................................................................................................................................................ACCAGAAATGGATAGCGA......................181.000.00-----------------------1.00-------------------------------------
........................................................................................................CTGGAGCCTAGCAGAGCTGGAGA...........................................................................................................................231.000.00------------------------------------------------1.00------------
................................................................................................................................................................................CCGTACCTCGAATGCCTCAGTGG...................................................2311.001.00-----------------------------1.00-------------------------------
...................................................................................................................CAGAGCTGGAGCGCATATCCCC.................................................................................................................2211.001.00----------------------------------1.00--------------------------
......................................................................TGGGGTGGAGGCTTTGATA.................................................................................................................................................................191.000.00--1.00----------------------------------------------------------
...........................................................................................................................................TCTCTCTCCTTCGTCTCCGAGA.........................................................................................2211.001.00-----------------------------------------------------1.00-------
.................................................................................................GAGAGCCCTGGAGCCTAGCAGAG..................................................................................................................................2311.001.00--------------------------------------1.00----------------------
......................................................................................................CCCTGGAGCCTAGCAGAGCTG...............................................................................................................................2111.001.00-------------------------------------------1.00-----------------
..................................................................................................................................................CCTTCGTCTCCGAGTACTAGG...................................................................................2111.001.00---------------------------------------------------1.00---------
......................................................................................................CCCTGGAGCCTAGCAGAGCTGGT.............................................................................................................................231.000.00----1.00--------------------------------------------------------
.................................................................................................GAGAGCCCTGGAGCCTAGCAGAGC.................................................................................................................................2411.001.00--------------------------------------------1.00----------------
............................................................................................................AGCCTAGCAGAGCTGGAGCGCA........................................................................................................................2211.001.00---------------------------------1.00---------------------------
...........................................................................................................................................TCTCTCTCCTTCGTCTCCGAGTGA.......................................................................................2411.007.00-----------1.00-------------------------------------------------
......................................................................TGGGGTGGAGGCTTTTATG.................................................................................................................................................................191.000.00-1.00-----------------------------------------------------------
...GGGAGAGCGCGCGGTGC......................................................................................................................................................................................................................................1711.001.00--1.00----------------------------------------------------------
.........................................................................................................TGGAGCCTAGCAGAGCTGGAGCGC.........................................................................................................................2411.001.00------------------------1.00------------------------------------
.............................................................................................................................................................GAGTACTAGGCGGACACACT.........................................................................201.000.00--------------1.00----------------------------------------------
.................................................................................................GAGAGCCCTGGAGCCTAGCAGAGCTG...............................................................................................................................2611.001.00---------------------1.00---------------------------------------
...........................................................................................................................................TCTCTCTCCTTCGTCTCCGAG..........................................................................................2111.001.00----------------1.00--------------------------------------------
.................................................................................................GAGAGCCCTGGAGCCTAGCAGAGCATC..............................................................................................................................2711.001.00-------------------------1.00-----------------------------------
.......................................................................................................CCTGGAGCCTAGCAGAGCTGGAA............................................................................................................................2311.002.00-------------------------------1.00-----------------------------
.......................AGCCGCACCGGGTGGCCGAAGCAG...........................................................................................................................................................................................................2411.001.00----1.00--------------------------------------------------------
..CGGGAGAGCGCGCGG.........................................................................................................................................................................................................................................1550.800.80------------------------------------------------------0.80------
................................................................................................................................................................................................................TCACCAGAAATGGATA..........................1620.500.50--------------------------------------------------------0.50----
.........................................................GCGGGGAGTGGGATGGGG...............................................................................................................................................................................1820.500.50-------------------------------------------------------0.50-----
..................................................GTGAGTGGCGGGGAGTGG......................................................................................................................................................................................1820.500.50-----0.50-------------------------------------------------------
...........................................................................TGGAGGCTTTGAATGC...............................................................................................................................................................1650.200.20----------------------------------------------------------0.20--
.................................................GGTGAGTGGCGGGGA..........................................................................................................................................................................................1570.140.14-0.14-----------------------------------------------------------

Antisense strand
GCCGGGAGAGCGCGCGGTGCTGGAGCCGCACCGGGTGGCCGAAGCAGAAGGTGAGTGGCGGGGAGTGGGATGGGGTGGAGGCTTTGAATGCAAGGGTGAGAGCCCTGGAGCCTAGCAGAGCTGGAGCGCATATCCCCGCTCTCTCTCCTTCGTCTCCGAGTACTAGGCGGACACATCCGTACCTCGAATGCCTCAGTGGGCGCAGAGTTCACCAGAAATGGATAGCCGGATTCCTCGGCGCCTGCTGGGG
....................................................................................................((..((((((...((.((((..((((((........)))))))))).))....)))).))..))......................................................................................
....................................................................................................101.............................................................165...................................................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR189782GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189783SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR189784GSM359208(GSM359208)
hepg2_bindASP_hl_2. (cell line)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR037935(GSM510473)
293cand3. (cell line)
TAX577588(Rovira)
total RNA. (breast)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
GSM359209(GSM359209)
hepg2_biotin_el_hl_a. (cell line)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191493(GSM715603)
155genomic small RNA (size selected RNA from . (breast)
GSM359176(GSM359176)
hela_chip_smrna_pure. (hela)
SRR040036(GSM532921)
G243N. (cervix)
SRR037937(GSM510475)
293cand2. (cell line)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR189785SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577739(Rovira)
total RNA. (breast)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR040025(GSM532910)
G613T. (cervix)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM359178(GSM359178)
hela_nucl_t. (hela)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR038859(GSM458542)
MM386. (cell line)
SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553576(SRX182782)
source: Testis. (testes)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR038863(GSM458546)
MM603. (cell line)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)
SRR038858(GSM458541)
MEL202. (cell line)
SRR444050(SRX128898)
Sample 10cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
.......................................................................................................................................TCGGAGACGAAGGAGAGAGAGCGG........................................................................................... 2411.001.00--------1.00----------------------------------------------------
..........................................................................................................................................CTCTCTCTCCTTCGTCTGAG............................................................................................ 201.000.00----------------------1.00--------------------------------------
............................................................................................................................................CTCTCTCCTTCGTCTCCAC........................................................................................... 191.000.00---------------------------------------------1.00---------------
.........................................................................................................................................................................................GAATGCCTCAGTGGGAAAG.............................................. 191.000.00-----------------1.00-------------------------------------------
.......................................................................................................................................................................................................................................TCCTCGGCGCCTGCTTG.. 171.000.00--------------------------------1.00----------------------------
..........................................................................................................................................................................................................TTTCTGGTGAACTCTG................................ 1630.330.33---------------------------------------------------------0.33---
..........................................................................................................................................................................................................TTCTGGTGAACTCTG................................. 1580.250.25-----------------------------------------------------------0.120.12