ID: uc003yja.1_intron_8_0_chr8_101008759_r.5p
GENE: RGS22(17)
chr8:101011290-101011539-


(1)
AGO2.ip
(1)
AGO3.ip
(3)
BRAIN
(1)
BREAST
(11)
CELL-LINE
(1)
CERVIX
(1)
HEART
(1)
HELA
(6)
LIVER
(3)
OTHER
(3)
SKIN
(2)
UTERUS

Sense strand
TGCCATTGTTTCTTGCAAGTGAACAGTTTGCAGCACGTCAGAAGATAAAGGTATATAAATTAGTATAATCTTTTGATAGCAGTTGTCAGTACCTCTGAAAACTTCAAATGTACATACCTGGTGACCCAGCCATTGTCCTTTTTTTTTTTTTTTAAGGAATGGGCTCTCTCTGTCACCCAGTCTGAAGTGCAGTGGTGTGATCCTAGCTCACTGCAGCCTCGAACTCCTGTGCTCAAGCAATACTCCCACC
...............................................................................................................................((((....(((((.............)))))...))))......((((((((..(((.....)))))).))))).................................................
...............................................................................................................................128...........................................................................206..........................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
GSM956925PAZD5SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR390724(GSM850203)
small rna immunoprecipitated. (cell line)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR189787SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR189782SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040036(GSM532921)
G243N. (cervix)
....................................................................................................................................TTGTCCTTTTTTTTTTTTTTTAATC.............................................................................................2510.000.0010.00-------------------------------
....................................................................................................................................TTGTCCTTTTTTTTTTTTAATC................................................................................................228.000.008.00-------------------------------
.....................................................................................................................................................................................CTGAAGTGCAGTGGTGTAGGG................................................217.000.00--7.00-----------------------------
....................................................................................................................................TTGTCCTTTTTTTTTAATC...................................................................................................197.000.007.00-------------------------------
....................................................................................................................................TTGTCCTTTTTTTTTTTTAC..................................................................................................202.000.001.001.00------------------------------
....................................................................................................................................TTGTCCTTTTTTTTTTTTTTTAATT.............................................................................................252.000.002.00-------------------------------
......................................................................................................................................................................................................................................GCTCAAGCAATACTCCCACC2001.001.00------------------1.00-------------
....................................................................................................................................TTGTCCTTTTTTTTTTTTTTTCTTT.............................................................................................251.000.00-1.00------------------------------
..............................................................................................................................................................................ACCCAGTCTGAAGTGCAGTG........................................................2001.001.00----1.00---------------------------
....................................................................................................................................TTGTCCTTTTTTTTTTTTTTTAATCC............................................................................................261.000.001.00-------------------------------
.....................................................................................................................................TGTCCTTTTTTTTTTTTTTTAAATT............................................................................................251.000.00-----------------------------1.00--
...................................................................................................................................ATTGTCCTTTTTTTTTTTTCAC.................................................................................................221.000.001.00-------------------------------
....................................................................................................................................TTGTCCTTTTTTTTTTTTTTTCTT..............................................................................................241.000.001.00-------------------------------
.....................................................................................................................................TGTCCTTTTTTTTTTTATTG.................................................................................................201.000.001.00-------------------------------
....................................................................................................................................TTGTCCTTTTTTTTTTTACTG.................................................................................................211.000.001.00-------------------------------
.....................................................................................................................................TGTCCTTTTTTTTTTTTTTTAAACCT...........................................................................................261.000.001.00-------------------------------
..........................................................................................ACCTCTGAAAACTTCAGTAC............................................................................................................................................201.000.00-------------------------1.00------
.................................................................................................................................................................................CAGTCTGAAGTGCAGTGGTGTGAC.................................................241.000.00-----------------1.00--------------
......................................................................................................................................GTCCTTTTTTTTTTTTTTCTTA..............................................................................................221.000.00-1.00------------------------------
....................................................................................................................................TTGTCCTTTTTTTTTTTTTTTAATTT............................................................................................261.000.001.00-------------------------------
.....................................................................................................................................TGTCCTTTTTTTTTTTTTTTCTGG.............................................................................................241.000.00-1.00------------------------------
....................................................................................................................................TTGTCCTTTTTTTTTTTTTTCAAG..............................................................................................241.000.001.00-------------------------------
...........................TTGCAGCACGTCAGAATTG............................................................................................................................................................................................................191.000.00---------------------1.00----------
...........................................................................................................................................................................................................TAGCTCACTGCAGCCTCGAACTCCGGGT...................281.000.001.00-------------------------------
..........................................................................................................................................................................................................................TCGAACTCCTGTGCTCAAGCCTGC........241.000.00--------------------------1.00-----
....................................................................................................................................TTGTCCTTTTTTTTTTTTTATTT...............................................................................................231.000.00-------1.00------------------------
.......................................................................................................................................TCCTTTTTTTTTTTTTTTAAGCGC...........................................................................................241.000.00-1.00------------------------------
....................................................................................................................................TTGTCCTTTTTTTTTTTTACA.................................................................................................211.000.001.00-------------------------------
...................................................................................................................................................................................................TGTGATCCTAGCTCATTCG....................................191.000.00----------------1.00---------------
...........................................................................................................................................................................................................TAGCTCACTGCAGCCTCGAACCG........................231.000.00-1.00------------------------------
...................................................................................................................................ATTGTCCTTTTTTTTTTTTTACA................................................................................................231.000.00-1.00------------------------------
....................................................................................................................................TTGTCCTTTTTTTTTTTTTTTCTCT.............................................................................................251.000.00-1.00------------------------------
....................................................................................................................................TTGTCCTTTTTTTTTTTTTTTAACC.............................................................................................251.000.001.00-------------------------------
...................................................................................................................................ATTGTCCTTTTTTTTTTTTTAC.................................................................................................221.000.00-1.00------------------------------
..........................................................................................................................................TTTTTTTTTTTTTTTAAGGAATGGG.......................................................................................2520.500.50-0.50------------------------------
.......................................................................................................................................TCCTTTTTTTTTTTTTTTAAGG.............................................................................................2290.220.22-------0.22------------------------
.............................................................................................................................................................................................................................AACTCCTGTGCTCAAGCAATA........2150.200.20-------------------------------0.20
.......................................................................................................................................TCCTTTTTTTTTTTTTTTAAGGGAAG.........................................................................................2690.110.22--------0.11-----------------------

Antisense strand
TGCCATTGTTTCTTGCAAGTGAACAGTTTGCAGCACGTCAGAAGATAAAGGTATATAAATTAGTATAATCTTTTGATAGCAGTTGTCAGTACCTCTGAAAACTTCAAATGTACATACCTGGTGACCCAGCCATTGTCCTTTTTTTTTTTTTTTAAGGAATGGGCTCTCTCTGTCACCCAGTCTGAAGTGCAGTGGTGTGATCCTAGCTCACTGCAGCCTCGAACTCCTGTGCTCAAGCAATACTCCCACC
...............................................................................................................................((((....(((((.............)))))...))))......((((((((..(((.....)))))).))))).................................................
...............................................................................................................................128...........................................................................206..........................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
GSM956925PAZD5SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR390724(GSM850203)
small rna immunoprecipitated. (cell line)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR189787SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR189782SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040036(GSM532921)
G243N. (cervix)
.............................................................................................................................CCAGCCATTGTCCTTTTC........................................................................................................... 183.000.00---3.00----------------------------
............................................................................................................................................................................................................AGCTCACTGCAGCCTCGAACTCCTCC.................... 262.000.001.001.00------------------------------
.............................................................................................................................CCAGCCATTGTCCTTTTT........................................................................................................... 182.000.00--------------1.00------------1.00----
............................................................................................................................................................................................................AGCTCACTGCAGCCTCGAACTCTATA.................... 262.000.00-----2.00--------------------------
......................................................................................................................................................................................................GATCCTAGCTCACTGCAGCCTCGAACTGCA...................... 301.000.001.00-------------------------------
................................................................................................................................................................................................TGGTGTGATCCTAGCTCATCGC.................................... 221.000.00-1.00------------------------------
......................................................................................................................................................................TCTCTGTCACCCAGTCTGCAA............................................................... 211.000.00-----------------------1.00--------
.......................................................................................................................................................................................ACACCACTGCACTTC.................................................... 1501.001.00----------1.00---------------------
..........................................................................................................................GACCCAGCCATTGTCCTTGGT........................................................................................................... 211.000.00-------------1.00------------------
........................................................................................................................................................................................................TCCTAGCTCACTGCAGCCTCCCAG.......................... 241.000.00-1.00------------------------------
................................................................................................................................................................................................................CACTGCAGCCTCGAACTCCTGTGCTGGC.............. 281.000.001.00-------------------------------
................................................................................................................................................................GGGCTCTCTCTGTCACAGG....................................................................... 191.000.00-------------------1.00------------
.............................................................................................................................................................................................................GCTCACTGCAGCCTCGAAAGCG....................... 221.000.00-1.00------------------------------
..........................................................................................................................................................................................................CTAGCTCACTGCAGCCTCTCG........................... 211.000.00-1.00------------------------------
.........................................................................................................................................................................................................................................CAAGCAATACTCCCACCTGGT 211.000.00---------1.00----------------------
.....................................................................................................................................................................................................................CAGCCTCGAACTCCTGTGCTAAG.............. 231.000.00-1.00------------------------------
.......................................................................................................................................................................................................ATCCTAGCTCACTGCAGCCTGCGC........................... 241.000.00-1.00------------------------------
...........................................................................................................................ACCCAGCCATTGTCCTTGG............................................................................................................ 191.000.00--------------------1.00-----------
.....................................................................................................................................................................................................................CAGCCTCGAACTCCTACGT.................. 191.000.00------1.00-------------------------
.................................................................................................................................................................................................................ACTGCAGCCTCGAACTCCTGTAT.................. 231.000.00------------------------1.00-------
...........................................................................................................................ACCCAGCCATTGTCCTAA............................................................................................................. 181.000.00------1.00-------------------------
................................................................................................................................................................................................................CACTGCAGCCTCGAACTCCGGCA................... 231.000.00----------------------------1.00---
............................................................................................................................CCCAGCCATTGTCCTAATT........................................................................................................... 191.000.00---------------1.00----------------
...............................................................................................................................................................................................................TCACTGCAGCCTCGAACTCCTGTGCTCAACCC........... 321.000.001.00-------------------------------
...........................................................................................................................................................................................................TAGCTCACTGCAGCCTCGAACTCCTCGAG.................. 291.000.001.00-------------------------------
.............................................................................................................................................................................................................GCTCACTGCAGCCTCGAACTCGTGG.................... 251.000.00-1.00------------------------------
..................................................................................................................................................................................................................CAGGAGTTCGAGGCTGCAG..................... 1901.001.00----1.00---------------------------
.....................................................................................................................................................................................................................CAGCCTCGAACTCCTGTGTAAA............... 221.000.00----------------------1.00---------
...............................................................................................................................................................................................GTGGTGTGATCCTAGCTCACTGCAGCCTCGC............................ 311.000.001.00-------------------------------
.............................................................................................................................CCAGCCATTGTCCTTTGTA.......................................................................................................... 191.000.00-----------1.00--------------------
.............................................................................................................................................................................................................GCTCACTGCAGCCTCGAACTAGCG..................... 241.000.00--------1.00-----------------------
.............................................................................................................................................................................................................GCTCACTGCAGCCTCGGAGG......................... 201.000.00-1.00------------------------------
.......................................................................................................................................................................CTCTGTCACCCAGTCTGG................................................................. 181.000.00------------1.00-------------------
.......................................................................................................................................................................................................................ATTGCTTGAGCACAGGAGTTCGAGGC......... 2620.500.500.50-------------------------------
.............................................................................................................................AAAAGGACAATGGCTGG............................................................................................................ 1730.330.33------------------------------0.33-
............................................................................................................................................................................................................AGCACAGGAGTTCGAGGCTGCAGTGAGCT................. 2990.220.22-0.22------------------------------
....................................................................................................................................................................................................TTCGAGGCTGCAGTGAGCTAGGATCAC........................... 2750.200.20-0.20------------------------------
.............................................................................................................................................................................................................TGAGCACAGGAGTTCGAGGCTGCAGTGAGC............... 3080.120.12-0.12------------------------------