ID: uc003yha.1_intron_2_0_chr8_95839632_f
GENE: INTS8(3)
chr8:95839582-95839999+


(1)
AGO2.ip
(10)
B-CELL
(2)
BREAST
(6)
CELL-LINE
(1)
HEART
(1)
KIDNEY
(2)
LIVER
(3)
OTHER
(5)
SKIN
(1)
TESTES
(1)
UTERUS

Sense strand
GCCACTTTACCTCCGACCACTGCCATGGCTGTACTTCTCTATAATAGATGGTAAATGTTTTCATAAACTCAGAAGGCGTTGGGCAACCTCTGTTTTATTGCACTGTGGCTTTCAAGGATATTCTTTTAATGGACCCATTCTGCTGCAGGGATTTTTCAAATCTGGGGAACTGTGAGTCTAATGGTGGAGAAAATTTGTGACTGCATAGATGAAAAGCAATCTGATAAAAATGTGGATGACTTATGCAGGATTTACCATGTGTCAATTAATGCTTCATATAATTTATACAAACCTAAGGAGTACTTGAAAAAATAATTGAGATGACATTTATAATGTATGAAATTTTCTTTTTCCTGTCTTTTCTTCAGGGCAATTAGGACAATTGTTCAAAGTAGTTTTCCAGTCAAACAGGCAAAAC
................................................................................................................................................................................................(((((((....)))))))...(((..((((.(((....)))))))..)))................................................................................................................................................................................
...........................................................................................................................................................................................188......................................................245...........................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR037938(GSM510476)
293Red. (cell line)
SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)
SRR015361(GSM380326)
Memory B cells (MM55). (B cell)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR189782SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR553576(SRX182782)
source: Testis. (testes)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
SRR189785SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
................................................................................................................................................................................................ATTTGTGACTGCATAGCTAG..............................................................................................................................................................................................................209.000.008.00-----------------------1.00---------
.................................................................................................................................................................................................TTTGTGACTGCATAGCTAG..............................................................................................................................................................................................................198.000.00---1.004.00------2.00--------------1.00-------
................................................................................GGGCAACCTCTGTTTTATTGCACTGTGG......................................................................................................................................................................................................................................................................................................................2817.007.00--7.00-------------------------------
................................................................................................................................................................................................ATTTGTGACTGCATATC.................................................................................................................................................................................................................177.000.00-7.00--------------------------------
..................................................................................................................................................................................TAATGGTGGAGAAAATC...............................................................................................................................................................................................................................175.000.00-5.00--------------------------------
................................................................................................................................................................................................ATTTGTGACTGCATAGCT................................................................................................................................................................................................................184.000.004.00---------------------------------
.................................................................................................................................................................................................TTTGTGACTGCATAGCTA...............................................................................................................................................................................................................184.000.00---1.00--2.00----------------------1.00----
.........................TGGCTGTACTTCTCTATAATAGATGGGC.............................................................................................................................................................................................................................................................................................................................................................................282.000.00----------2.00-----------------------
................................................................................................................................................................................................ATTTGTGACTGCATAGC.................................................................................................................................................................................................................172.000.00---1.00----------------------------1.00-
........................ATGGCTGTACTTCTCTATAATAGATG................................................................................................................................................................................................................................................................................................................................................................................2612.002.00-----2.00----------------------------
................................................................................................................................................................................................ATTTGTGACTGCATAGATAG..............................................................................................................................................................................................................201.000.001.00---------------------------------
.............................................................................................................................................................................................................................TGATAAAAATGTGGATTAAA.................................................................................................................................................................................201.000.00--------------1.00-------------------
.............................................................CATAAACTCAGAAGGCGTTGGGCAACCTCTG......................................................................................................................................................................................................................................................................................................................................3111.001.00------------1.00---------------------
...........TCCGACCACTGCCATGGCT....................................................................................................................................................................................................................................................................................................................................................................................................1911.001.00------------------------------1.00---
..............................................................................................................................................................................................................................................................................................................................................................................................TTGTTCAAAGTAGTTTTCCAGTCAAACAGGC.....3111.001.00-----------------1.00----------------
.................................................................AACTCAGAAGGCGTTGGGCAACCTCTGC.....................................................................................................................................................................................................................................................................................................................................281.000.00---------1.00------------------------
......................CCATGGCTGTACTTCTC...........................................................................................................................................................................................................................................................................................................................................................................................1711.001.00----------------------1.00-----------
.....................GCCATGGCTGTACTTCT............................................................................................................................................................................................................................................................................................................................................................................................1711.001.00-------1.00--------------------------
........ACCTCCGACCACTGCCATG.......................................................................................................................................................................................................................................................................................................................................................................................................1911.001.00-----------------------1.00----------
.......................CATGGCTGTACTTCTCT..........................................................................................................................................................................................................................................................................................................................................................................................1711.001.00-------------1.00--------------------
..................................................................................................................................................................................TAATGGTGGAGAAAATGCG.............................................................................................................................................................................................................................191.000.00--------------------1.00-------------
..................................................................................................................................................................................TAATGGTGGAGAAAAATA..............................................................................................................................................................................................................................1801.001.00------------------1.00---------------
..........................................................................................................................................................................................................................................................................................................................................TAATGTATGAAATTTTCTTTTTCCT...............................................................2511.001.00-------------------------------1.00--
...............................................................................................................................................................................................AATTTGTGACTGCATAGATGAAAAGCAAT......................................................................................................................................................................................................2911.001.00-------------------------1.00--------
...............................................................................................................................................................................................................................................................................CTTCATATAATTTATACAAACCTAAG.........................................................................................................................2611.001.00---------------------------1.00------
......................CCATGGCTGTACTTCTCTATAATAGATGGG..............................................................................................................................................................................................................................................................................................................................................................................301.000.00-------1.00--------------------------
.................................................................................................................................................................................CTAATGGTGGAGAAAAAAAA.............................................................................................................................................................................................................................201.000.00----------------1.00-----------------
................................................................................................................................ATGGACCCATTCTGCTGCAGGGA...........................................................................................................................................................................................................................................................................2311.001.00---------1.00------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................AGGACAATTGTTCAAAGTA........................1911.001.00-------------------1.00--------------
................................................................................................................................................................................................ATTTGTGACTGCATAGCTA...............................................................................................................................................................................................................191.000.00---1.00------------------------------
..................................................................................................................................................................................TAATGGTGGAGAAAA.................................................................................................................................................................................................................................1501.001.00---------------------1.00------------
.................................................................................................................................................................................................................................AAAAATGTGGATGACTTATGCA...........................................................................................................................................................................2211.001.00----------------------------1.00-----
......................CCATGGCTGTACTTCTCTAT........................................................................................................................................................................................................................................................................................................................................................................................2011.001.00--------1.00-------------------------

Antisense strand
GCCACTTTACCTCCGACCACTGCCATGGCTGTACTTCTCTATAATAGATGGTAAATGTTTTCATAAACTCAGAAGGCGTTGGGCAACCTCTGTTTTATTGCACTGTGGCTTTCAAGGATATTCTTTTAATGGACCCATTCTGCTGCAGGGATTTTTCAAATCTGGGGAACTGTGAGTCTAATGGTGGAGAAAATTTGTGACTGCATAGATGAAAAGCAATCTGATAAAAATGTGGATGACTTATGCAGGATTTACCATGTGTCAATTAATGCTTCATATAATTTATACAAACCTAAGGAGTACTTGAAAAAATAATTGAGATGACATTTATAATGTATGAAATTTTCTTTTTCCTGTCTTTTCTTCAGGGCAATTAGGACAATTGTTCAAAGTAGTTTTCCAGTCAAACAGGCAAAAC
................................................................................................................................................................................................(((((((....)))))))...(((..((((.(((....)))))))..)))................................................................................................................................................................................
...........................................................................................................................................................................................188......................................................245...........................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR037938(GSM510476)
293Red. (cell line)
SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)
SRR015361(GSM380326)
Memory B cells (MM55). (B cell)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR189782SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR553576(SRX182782)
source: Testis. (testes)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
SRR189785SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
...................................................................................................................................................................................................................................................................................................................AAAAATAATTGAGATGAATT........................................................................................... 201.000.00---------------------------------1.00
...................................................................................................................................................................................................................................................................................................................................................................GTCTTTTCTTCAGGGTGGC............................................ 191.000.00---------------1.00------------------
.................................................................................................................................................................CTGGGGAACTGTGAGTTC............................................................................................................................................................................................................................................... 181.000.00--------1.00-------------------------
........................................................................................................................................................................................................................CATTTTTATCAGATTG.......................................................................................................................................................................................... 1630.330.33------------0.33---------------------